The DOI matches its Crossref record; 84 of the 84 references it cites were found in a registry or an index.
Temperature-dependent solvation modulates the dimensions of disordered proteins
Open accessAbstract
Significance: A large number of naturally occurring proteins are now known to be unstructured under physiological conditions. Many of these intrinsically disordered proteins (IDPs) bind other biological macromolecules or ligands and are involved in important regulatory processes in the cell. For understanding the structural basis of these functional properties, it is essential to quantify the balance of interactions that modulate the heterogeneous conformational distributions of IDPs and unfolded proteins in general. In contrast to the behavior expected for simple polymers with temperature-independent intramolecular interactions, unfolded proteins become more compact when the temperature is raised. Here, we show that the temperature dependence of the interactions of the constituent amino acid residues with the aqueous solvent have a dominant effect on this behavior.
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“Proteins with very flexible conformations, such as intrinsically disordered proteins (IDP), are expected to have larger heat capacity than well-defined proteins.96–98”
From Protein Ensembles: How Does Nature Harness Thermodynamic Fluctuations for Life? The Diverse Functional Roles of Conformational Ensembles in the Cell (2016) · cites this paper as [98]
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Cites
A simple method for displaying the hydropathic character of a protein
Kyte, J., & Doolittle, R. F. (1982) · Journal of Molecular Biology · doi:10.1016/0022-2836(82)90515-0 · Cited by 22,927
Intrinsically unstructured proteins and their functions
Dyson, H. J., & Wright, P. E. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1589 · Cited by 3,871
Dominant forces in protein folding
Dill, K. A. (1990) · Biochemistry · doi:10.1021/bi00483a001 · Cited by 3,829
Interfaces and the driving force of hydrophobic assembly
Chandler, D. (2005) · Nature · doi:10.1038/nature04162 · Cited by 3,652
Hydrophobicity at Small and Large Length Scales
Lum, K., Chandler, D., & Weeks, J. D. (1999) · The Journal of Physical Chemistry B · doi:10.1021/jp984327m · Cited by 1,680
Intrinsically Disordered Proteins in Human Diseases: Introducing the D 2 Concept
Uversky, V. N., Oldfield, C. J., & Dunker, A. K. (2008) · Annual Review of Biophysics · doi:10.1146/annurev.biophys.37.032807.125924 · Cited by 1,447
Cabani, S., Gianni, P., Mollica, V., & Lepori, L. (1981) · Journal of Solution Chemistry · doi:10.1007/bf00646936 · Cited by 972
Function and structure of inherently disordered proteins
Dunker, A. K., Silman, I., Uversky, V. N., & Sussman, J. L. (2008) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2008.10.002 · Cited by 963
Temperature dependence of the hydrophobic interaction in protein folding.
Baldwin, R. L. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.21.8069 · Cited by 900
Affinities of amino acid side chains for solvent water
Wolfenden, R. V., Andersson, L., Cullis, P. M., & Southgate, C. C. B. (1981) · Biochemistry · doi:10.1021/bi00507a030 · Cited by 860
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Riback, J. A., Katanski, C. D., Kear‐Scott, J. L., Pilipenko, E. V., Rojek, A. E., Sosnick, T. R., & Drummond, D. A. (2017) · Cell · doi:10.1016/j.cell.2017.02.027 · Cited by 936
Piana, S., Donchev, A., Robustelli, P., & Shaw, D. E. (2015) · The Journal of Physical Chemistry B · doi:10.1021/jp508971m · Cited by 858
The molecular basis for cellular function of intrinsically disordered protein regions
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Best, R., Zheng, W.-W., & Mittal, J. (2014) · Journal of Chemical Theory and Computation · doi:10.1021/ct500569b · Cited by 312
Self-citationWei, G., Xi, W., Nussinov, R., & Ma, B. (2016) · Chemical Reviews · doi:10.1021/acs.chemrev.5b00562 · Cited by 436
Metadata
- Authors
- Wuttke, R., Hofmann, H., Nettels, D., Borgia, M. B., Mittal, J., Best, R. B., & Schuler, B.
- Affiliations
- University of Zurich (CH)
- Lehigh University (US)
- National Institutes of Health (US)
- ORCID
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2014-03-21
- Volume
- 111
- Issue
- 14
- Pages
- 5213-5218
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3986154
- OpenAlex
- W2113696142
- Cited by
- 192
- References
- 84
- Citations by year
- 2026: 7 · 2025: 17 · 2024: 10 · 2023: 16 · 2022: 14 · 2021: 20 · 2020: 14 · 2019: 22 · 2018: 14 · 2017: 16 · 2016: 15 · 2015: 20 · 2014: 7
- FWCI
- 7.92
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion)
- Zurich Open Repository and Archive (University of Zurich)
- Funders
- National Institutes of Health
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Interaction Studies and Fluorescence Analysis
- Physical Sciences › Chemistry › Physical and Theoretical Chemistry › Photochemistry and Electron Transfer Studies
- Keywords
- intrinsically disordered proteins, chain collapse, hydrophobic effect, solvation free energy, amino acid hydrophobicity, lambda repressor, protein unfolding
- MeSH terms
- Protein Conformation, Solubility, Temperature, Thermodynamics, Fluorescence Resonance Energy Transfer, Hydrophobic and Hydrophilic Interactions, Protein Unfolding
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