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Standard Isolation of Primary Adipose Cells from Mouse Epididymal Fat Pads Induces Inflammatory Mediators and Down-regulates Adipocyte Genes
Open accessAbstract
Isolation and subsequent in vitro culture of primary adipose cells are associated with down-regulation of GLUT4 mRNA and simultaneous induction of GLUT1 gene expression. Progressive loss of insulin-responsive GLUT4 contributes to the decrease in insulin-mediated glucose uptake in these cells when cultured in vitro. The mechanisms underlying these alterations are unknown. Here, we report that the standard procedure for isolating primary adipose cells from mouse adipose tissue triggers induction of many genes encoding inflammatory mediators including TNF-alpha, interleukin (IL)-1 alpha, IL-6, multiple chemokines, cell adhesion molecules, acute-phase proteins, type I IL-1 receptor, and multiple transcription factors implicated in the cellular inflammatory response. Secretion of TNF-alpha protein was also significantly induced during the 2-h collagenase digestion of adipose tissue. Isolated primary adipose cells exhibit dramatic changes in expression of multiple mRNAs that are characteristic of TNF-alpha-treated 3T3-L1 adipocytes including down-regulation of many genes important for insulin action and triglyceride synthesis. Addition of TNF-alpha to primary adipose cells in culture did not change the kinetics or the extent of the repression of adipose cell-abundant genes. Moreover, TNF-alpha-neutralizing antibody failed to block the changes in gene transcription in isolated primary adipose cells. Also, the standard isolation procedure induced the expression of NF-kappa B family members and their target genes in primary adipose cells prepared from TNF-alpha-/- mice to the same extent as in cells isolated from wild-type mice and resulted in almost identical changes in global gene expression when these cells were cultured in vitro. Thus, these data suggest that the standard isolation procedure-triggered reprogramming of gene expression in primary adipose cells that results in decreased insulin sensitivity does not require TNF-alpha, at least in this in vitro model system, but may be dependent on other inflammatory cytokines produced by these cells.
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“It cannot be excluded that this enzymatic digestion technique may have a potential influence on the expression profiles of separated cells, as noted previously in mouse studies [65].”
From Adipose tissue transcriptomic signature highlights the pathological relevance of extracellular matrix in human obesity (2008) · cites this paper as [65]
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Cites
Kohonen, T. (1990) · Proceedings of the IEEE · doi:10.1109/5.58325 · Cited by 8,414
Mammalian MAP kinase signalling cascades
Chang, L., & Karin, M. (2001) · Nature · doi:10.1038/35065000 · Cited by 5,118
Tamayo, P., Slonim, D. K., Mesirov, J. P., Zhu, Q., Kitareewan, S., Dmitrovsky, E., Lander, E. S., & Golub, T. R. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.6.2907 · Cited by 2,924
Pathogenesis of NIDDM. A balanced overview.
DeFronzo, R. A., Bonadonna, R. C., & Ferrannini, E. (1992) · Diabetes Care · doi:10.2337/diacare.15.3.318 · Cited by 2,085
Cho, H., Mu, J., Kim, J. K., Thorvaldsen, J. L., Chu, Q., Crenshaw, E. B., Kaestner, K. H., Bartolomei, M. S., Shulman, G. I., & Birnbaum, M. J. (2001) · Science · doi:10.1126/science.292.5522.1728 · Cited by 1,860
Physiological role of adipose tissue: white adipose tissue as an endocrine and secretory organ
Trayhurn, P., & Beattie, J. H. (2001) · Proceedings of The Nutrition Society · doi:10.1079/pns200194 · Cited by 1,292
Thiazolidinediones in the Treatment of Insulin Resistance and Type II Diabetes
Saltiel, A. R., & Olefsky, J. M. (1996) · Diabetes · doi:10.2337/diab.45.12.1661 · Cited by 1,050
Matsusaka, T., Fujikawa, K., Nishio, Y., Mukaida, N., Matsushima, K., Kishimoto, T., & Akira, S. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.21.10193 · Cited by 959
Dunne, A., & O'Neill, L. A. J. (2003) · Science Signaling · doi:10.1126/stke.2003.171.re3 · Cited by 761
Potential Role of TNF-α in the Pathogenesis of Insulin Resistance and Type 2 Diabetes
Moller, D. E. (2000) · Trends in Endocrinology and Metabolism · doi:10.1016/s1043-2760(00)00272-1 · Cited by 730
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Thompson, A. C. S., Nuñez, M., Davidson, R. D., Horm, T. M., Schnittker, K., Hart, M. V., Suarez, A. M., & Tsao, T. (2012) · Journal of Lipid Research · doi:10.1194/jlr.d031286 · Cited by 16
Insulin resistance at the crossroads of metabolic syndrome: Systemic analysis using microarrays
Kim, E.-J. (2010) · Biotechnology Journal · doi:10.1002/biot.201000048 · Cited by 16
RASMUSSEN, M., Belza, A., Almdal, T., Toubro, S., Bratholm, P. S., Astrup, A. V., & CHRISTENSEN, N. J. (2005) · Clinical Science · doi:10.1042/cs20040238 · Cited by 16
Microarray technology in the study of obesity and non‐alcoholic fatty liver disease
Baranova, A. V., Schlauch, K. A., Gowder, S., Collantes, R. S., Chandhoke, V., & Younossi, Z. M. (2005) · Liver International · doi:10.1111/j.1478-3231.2005.01183.x · Cited by 16
Shi, Y., Liu, Y., Murdin, A. D., Raudonikiene‐Mancevski, A., Ayach, B., Yu, Z., Fantus, I. G., & Liu, P. P. (2008) · The Journal of Infectious Diseases · doi:10.1086/525045 · Cited by 16
Burkett, W. C., Clontz, A. D., Keku, T. O., & Bae-Jump, V. L. (2023) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2023.189000 · Cited by 23
Olenczak, J. B., Seaman, S. A., Lin, K. Y. K., Piñeros-Fernandez, A., Davis, C. E., Salopek, L. S., Peirce, S. M., & Cottler, P. S. (2017) · Annals of Plastic Surgery · doi:10.1097/sap.0000000000001063 · Cited by 14
Min, J., Kim, J. H., Choi, K. H., Yoon, H. H., & Jeon, S. R. (2017) · Journal of Korean Neurosurgical Society · doi:10.3340/jkns.2016.1010.008 · Cited by 14
Gountopoulou, A., Leondaritis, G., Galanopoulou, D., & Mavri‐Vavayanni, M. (2008) · Cytokine · doi:10.1016/j.cyto.2007.11.008 · Cited by 14
Fain, J. N., Cheema, P. S., Tichansky, D. S., & Madan, A. K. (2010) · Journal of Inflammation · doi:10.1186/1476-9255-7-4 · Cited by 12
Zhang, C., Yoon, M., & Chen, J. (2009) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.90651.2008 · Cited by 10
Characterisation of insulin-resistant phenotype of cultured rat primary adipose cells
Xiang, C. C., Wu, Y., Ma, L., Ding, L., Lisinski, I., Brownstein, M., Cushman, S. W., & Chen, X. (2007) · Diabetologia · doi:10.1007/s00125-007-0626-z · Cited by 10
Self-citationKabir, M., Bergman, R. N., Porter, J., Stefanovski, D., Paszkiewicz, R. L., Piccinini, F., Woolcott, O. O., Yang, H., Gopaul, V. S., Stiles, L., et al. (2023) · Obesity · doi:10.1002/oby.23771 · Cited by 10
Ostreolysin induces browning of adipocytes and ameliorates hepatic steatosis
Nimri, L., Staikin, K., Peri, I., Yehuda‐Shnaidman, E., & Schwartz, B. (2018) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.14259 · Cited by 9
Rotondo, F., Ho-Palma, A. C., Remesar, X., Fernández-López, J. A., Romero, M. D. M., & Alemany, M. (2018) · PeerJ · doi:10.7717/peerj.5440 · Cited by 9
Gómez‐Millán, J., Queipo‐Ortuño, M. I., Delgado, M. D. M., Pérez-Villa, L., Roman, A., de la Portilla, F., Torres, E., de Luque, V., Bayo, E., & Medina, J. A. (2017) · Journal of Surgical Oncology · doi:10.1002/jso.24494 · Cited by 10
Sparling, D. P., Griesel, B. A., & Olson, A. L. (2006) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00521.2006 · Cited by 8
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Decaunes, P., Bouloumié, A., Rydén, M., & Galitzky, J. (2018) · BIO-PROTOCOL · doi:10.21769/bioprotoc.2711 · Cited by 7
Zhang, X., Gao, Y., Liu, Z., Li, W., Kang, Y., Li, X., Xu, Z., Peng, C. Y., & Qi, Y. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms24010320 · Cited by 7
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Lee, Y., Tharp, W. G., Dixon, A. E., Spaulding, L., Trost, S. U., Nair, S., Permana, P. A., & Pratley, R. E. (2009) · Animal Cells and Systems · doi:10.1080/19768354.2009.9647232 · Cited by 7
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Thelen, K. M., Ayala‐Lopez, N., Watts, S. W., & Contreras, G. A. (2017) · Journal of Visualized Experiments · doi:10.3791/55818 · Cited by 7
Rampengan, D. D. C. H., Syahputra, R. A., Halim, P., Kumalawati, D. A., Ramadhan, R. N., Surya, R., Wiyarta, E., Permatasari, H. K., Tjandrawinata, R. R., Taslim, N. A., et al. (2024) · Journal of Agriculture and Food Research · doi:10.1016/j.jafr.2024.101526 · Cited by 5
Application of DNA Microarray to the Study of Human Adipose Tissue/Cells
Permana, P. A., Nair, S., & Lee, Y. (2008) · Methods in molecular biology · doi:10.1007/978-1-59745-245-8_11 · Cited by 4
Carpéné, C., Bizou, M., Tréguer, K., Hasnaoui, M., & Grès, S. (2015) · Journal of Physiology and Biochemistry · doi:10.1007/s13105-014-0379-3 · Cited by 4
Amatya, S., Tietje‐Mckinney, D., Mueller, S., Petrillo, M. G., Woolard, M. D., Bharrhan, S., Orr, A. W., Kevil, C. G., Cidlowski, J. A., & Cruz‐Topete, D. (2023) · Endocrinology · doi:10.1210/endocr/bqad143 · Cited by 4
Ramsay, T. G., Blomberg, L. A., & Caperna, T. J. (2013) · animal · doi:10.1017/s1751731113001250 · Cited by 4
The effects of housing temperature on mouse physiology and implications for disease modeling
Bellucci, A., Baranowski, B. J., & Wright, D. C. (2026) · Lab Animal · doi:10.1038/s41684-026-01696-8 · Cited by 3
Liao, Z., Wang, Y., Hu, C., Gu, Q., Peng, T., Wu, L., Wang, Y., Zhu, L., Wang, Q., Li, R., et al. (2025) · International Immunopharmacology · doi:10.1016/j.intimp.2025.114414 · Cited by 3
Oncological Risk After Autologous Lipoaspirate Grafting in Breast Cancer Patients
Wang, Y. Y., Ren, G., Petit, J., & Muller, C. (2013) · Journal of Craniofacial Surgery · doi:10.1097/scs.0b013e31828b6c84 · Cited by 3
Liu, Z., & Yang, Y. (2015) · Obesity Research - Open Journal · doi:10.17140/oroj-1-103 · Cited by 3
Qi, Y., Miao, X., Xu, L., Fu, M., Peng, S., Shi, K., Li, J., Ye, M., & Li, R. (2020) · Journal of Visualized Experiments · doi:10.3791/60691 · Cited by 3
Wong, H. N., Qi, N., Arias, E. B., Cho, K. W., Nihalani, D., Cartee, G. D., & Holzman, L. B. (2025) · Molecular Metabolism · doi:10.1016/j.molmet.2025.102244 · Cited by 2
Kokai, L. E., & Rubin, J. P. (2019) · Plastic & Reconstructive Surgery · doi:10.1097/prs.0000000000006180 · Cited by 2
Lee, Y.-G., Jeong, A., Lim, Y., Shin, S., Joung, H., Cho, H. J., Lee, S., Yu, H. C., Kim, H.-S., Nam, K. I., et al. (2025) · Experimental & Molecular Medicine · doi:10.1038/s12276-025-01553-7 · Cited by 1
Tissu adipeux : glande endocrine polyvalente
Lafontan, M. (2007) · Cahiers de Nutrition et de Diététique · doi:10.1016/s0007-9960(07)88705-0 · Cited by 1
Hallén, S., & Clapham, J. C. (2009) · Expert Opinion on Drug Discovery · doi:10.1517/17460440902821640 · Cited by 1
Insulin signaling in primary adipocytes in insulin sensitive and insulin resistant states
Fagerholm, S. (2013) · Cited by 1
Role of leptin in the induction of obesity-related inflammation and infection susceptibility
Dib, L. H. (2011) · K-State Research Exchange (Kansas State University) · Cited by 1
Stöckli, J., & James, D. E. (2009) · AfCS-Nature Molecule Pages · doi:10.1038/mp.a001046.01 · Cited by 1
The role and regulation of argininosuccinate synthase in endothelial function
Goodwin, B. L. (2005) · Digital Commons - University of South Florida (University of South Florida)
Dietary effects on gene regulation and function in human adipose tissue in obesity
Nordström, E. A. (2007) · Figshare
Efeitos da atorvastatina sobre a inflamação e resistência à insulina em camundongos obesos.
Furuya, D. T. (2008) · Digital Library of Theses and Dissertations (Universidade de São Paulo) · doi:10.11606/t.42.2008.tde-16032009-125905
Macrophages, Adipocytes, and Obesity
Ferrante, A. W. (2007) · Humana Press eBooks · doi:10.1007/978-1-59745-370-7_10
Mehyar, N. (2011) · Iowa State University Digital Repository (Iowa State University) · doi:10.31274/etd-180810-912
Nitta, C. F. (2013) · UNM’s Digital Repository (University of New Mexico)
Fat Cell Biochemistry and Physiology
Shiffman, M. A. (2009) · Springer eBooks · doi:10.1007/978-3-642-00473-5_5
Metabolic Aspects of Polycystic Ovary Syndrome
Svacina, S. (2015) · Postgraduate Obstetrics & Gynecology · doi:10.1097/01.pgo.0000471434.20331.09
Senior Author Correspondence Information
(2004) · Recent Progress in Hormone Research · doi:10.1210/rp.59.1.1-v
Viguerie, N. (2008) · Birkhäuser Basel eBooks · doi:10.1007/978-3-7643-8334-3_5
Assays for Insulin and Insulin-Like Regulation of Gene and Protein Expression
Müller, G. A. (2015) · Springer eBooks · doi:10.1007/978-3-319-05392-9_156
Liao, Z., Wang, Y., Li, R., Hu, C., Gu, Q., Peng, T., Wu, L.-L., Wang, Y.-Y., Zhu, L., Qi, X.-Y., et al. (2022) · SSRN Electronic Journal · doi:10.2139/ssrn.4137356
Xiao, X., Liao, Z., Wang, Y.-D., Ran, L., Hu, C., Gu, Q., Peng, T., Wu, L.-L., Wang, Y.-Y., Qi, X.-Y., et al. (2022) · Research Square · doi:10.21203/rs.3.rs-1963317/v1
Liao, Z., Wang, Y., Li, R., Hu, C., Gu, Q., Peng, T., Wu, L.-L., Wang, Y.-Y., zhu, L.-Y., Qi, X.-Y., et al. (2023) · Research Square · doi:10.21203/rs.3.rs-1963317/v2
Assays for Insulin and Insulin-Like Regulation of Gene and Protein Expression
Müller, G. A. (2015) · Springer eBooks · doi:10.1007/978-3-642-27728-3_156-1
Young, J. L. (2008) · The Journal of the American Medical Association (JAMA) Network (American Medical Association) · doi:10.13028/4kma-sa11
Metadata
- Authors
- Ruan, H., Zarnowski, M. J., Cushman, S. W., & Lodish, H. F.
- Affiliations
- Whitehead Institute for Biomedical Research (US)
- National Institutes of Health (US)
- Corresponding author
- Lodish, Harvey F.
- ORCID
- Lodish, Harvey F.
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2003-11
- Volume
- 278
- Issue
- 48
- Pages
- 47585-47593
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2016692980
- Cited by
- 168
- References
- 31
- Citations by year
- 2026: 1 · 2025: 3 · 2024: 3 · 2023: 5 · 2022: 6 · 2021: 2 · 2020: 2 · 2019: 3 · 2018: 12 · 2017: 8 · 2016: 4 · 2015: 12 · 2014: 5 · 2013: 17 · 2012: 9
- FWCI
- 7.48
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- Howard Hughes Medical Institute
- American Diabetes Association
- National Institutes of Health
- Topics
- Health Sciences › Medicine › Endocrinology, Diabetes and Metabolism › Adipokines, Inflammation, and Metabolic Diseases
- Health Sciences › Medicine › Physiology (medical) › Adipose Tissue and Metabolism
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Peroxisome Proliferator-Activated Receptors
- Keywords
- epididymal adipose tissue, inflammatory mediators, TNF-α, insulin resistance, GLUT1, adipocyte gene expression, NF-κB, collagenase digestion, TNF-alpha knockout mice, inflammatory cytokines
- MeSH terms
- Epidermal Cells, Adipose Tissue, Animals, Cell Adhesion, Cells, Cultured, Dose-Response Relationship, Drug, Enzyme-Linked Immunosorbent Assay, Glucose, Inflammation, Insulin, Interleukin-1, Mice, Inbred C57BL, Monosaccharide Transport Proteins, Muscle Proteins, Oligonucleotides, RNA, Messenger, Time Factors, Tumor Necrosis Factor-alpha, Signal Transduction, Down-Regulation, Interleukin-6, NF-kappa B, Collagenases, Adipocytes, RNA, Complementary, Chemokines, Reverse Transcriptase Polymerase Chain Reaction, Oligonucleotide Array Sequence Analysis, 3T3-L1 Cells, Glucose Transporter Type 1, Glucose Transporter Type 4, Mice, In Vitro Techniques
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