Cited by 64Inflammasome and immune disordersImmune Response and InflammationGut microbiota and health

Bile acid analogues are activators of pyrin inflammasome

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Alimov, Irina, Menon, Suchithra, Cochran, Nadire, Maher, Rob, Wang, Qiong, Alford, John, Concannon, John B., Yang, Zinger +9 more·2019·Journal of Biological Chemistry

Abstract

Bile acids are critical metabolites in the gastrointestinal tract and contribute to maintaining intestinal immune homeostasis through cross-talk with the gut microbiota. The conversion of bile acids by the gut microbiome is now recognized as a factor affecting both host metabolism and immune responses, but its physiological roles remain unclear. We conducted a screen for microbiome metabolites that would function as inflammasome activators and herein report the identification of 12-oxo-lithocholic acid (BAA485), a potential microbiome-derived bile acid metabolite. We demonstrate that the more potent analogue 11-oxo-12 S -hydroxylithocholic acid methyl ester (BAA473) can induce secretion of interleukin-18 (IL-18) through activation of the inflammasome in both myeloid and intestinal epithelial cells. Using a genome-wide CRISPR screen with compound induced pyroptosis in THP-1 cells, we identified that inflammasome activation by BAA473 is pyrin-dependent ( MEFV ). To our knowledge, the bile acid analogues BAA485 and BAA473 are the first small molecule activators of the pyrin inflammasome. We surmise that pyrin inflammasome activation through microbiota-modified bile acid metabolites such as BAA473 and BAA485 plays a role in gut microbiota regulated intestinal immune response. The discovery of these two bioactive compounds may help to further unveil the importance of pyrin in gut homeostasis and autoimmune diseases.

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  • BAA485, a microbiota-derived bile acid metabolite, can induce the production of IL-18 in a pyrin-inflammasome-dependent manner.

    “Researchers have identified that an analogue of oxo-12S-hydroxylithocholic acid methyl ester (BAA473), a microbiota-derived bile acid metabolite, the 11-12-oxo-lithocholic acid (BAA485) can induce the production of IL-18, in a pyrin-inflammasome-dependent manner (214).”

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References 43 · Cited by 64

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  1. Broz, P., and Dixit, V. M. (2016) Inflammasomes: mechanism of assembly, regulation and signalling. Nat. Rev. Immunology 16, 407-420 CrossRef Medline · DOI · Paper page
  2. Guo, H., Callaway, J. B., and Ting, J. P. (2015) Inflammasomes: mechanism of action, role in disease, and therapeutics. Nat. Med. 21, 677-687 CrossRef Medline · DOI · Paper page
  3. Hoffman, H. M., Mueller, J. L., Broide, D. H., Wanderer, A. A., and Kolod- ner, R. D. (2001) Mutation of a new gene encoding a putative pyrin-like protein causes familial cold autoinflammatory syndrome and Muckle- Wells syndrome. Nat. Genet. 29, 301-305 CrossRef Medline · DOI
  4. Sharma, D., Malik, A., Guy, C. S., Karki, R., Vogel, P., and Kanneganti, T. D. (2018) Pyrin inflammasome regulates tight junction integrity to restrict colitis and tumorigenesis. Gastroenterology 154, 948 -964.e8 CrossRef Medline · DOI
  5. Elinav, E., Strowig, T., Kau, A. L., Henao-Mejia, J., Thaiss, C. A., Booth, C. J., Peaper, D. R., Bertin, J., Eisenbarth, S. C., Gordon, J. I., and Flavell, R. A. (2011) NLRP6 inflammasome regulates colonic microbial ecology and risk for colitis. Cell 145, 745-757 CrossRef Medline · DOI · Paper page
  6. Allen, I. C., TeKippe, E. M., Woodford, R. M., Uronis, J. M., Holl, E. K., Rogers, A. B., Herfarth, H. H., Jobin, C., and Ting, J. P. (2010) The NLRP3 inflammasome functions as a negative regulator of tumorigenesis during colitis-associated cancer. J. Exp. Med. 207, 1045-1056 CrossRef Medline · DOI · Paper page
  7. Zhernakova, A., Festen, E. M., Franke, L., Trynka, G., van Diemen, C. C., Monsuur, A. J., Bevova, M., Nijmeijer, R. M., van 't Slot, R., Heijmans, R., Boezen, H. M., van Heel, D. A., van Bodegraven, A. A., Stokkers, P. C., Wijmenga, C., et al. (2008) Genetic analysis of innate immunity in Crohn's disease and ulcerative colitis identifies two susceptibility loci harboring Bile acid analogues are activators of pyrin inflammasome CARD9 and IL18RAP. Am. J. Hum. Genet. 82, 1202-1210 CrossRef Medline · DOI
  8. Wahlstro ¨m, A., Sayin, S. I., Marschall, H. U., and Ba ¨ckhed, F. (2016) Intes- tinal crosstalk between bile acids and microbiota and its impact on host metabolism. Cell Metab. 24, 41-50 CrossRef Medline · DOI
  9. Groh, H., Schade, K., and Ho ¨rhold-Schubert, C. (1993) Steroid metabo- lism with intestinal microorganisms. J. Basic Microbiol. 33, 59 -72 CrossRef Medline · DOI
  10. Devlin, A. S., and Fischbach, M. A. (2015) A biosynthetic pathway for a prominent class of microbiota-derived bile acids. Nat. Chem. Biol. 11, 685-690 CrossRef Medline · DOI · Paper page
  11. Lei-Leston, A. C., Murphy, A. G., and Maloy, K. J. (2017) Epithelial cell inflammasomes in intestinal immunity and inflammation. Front. Immu- nol. 8, 1168 CrossRef Medline · DOI
  12. Moon, C., VanDussen, K. L., Miyoshi, H., and Stappenbeck, T. S. (2014) Development of a primary mouse intestinal epithelial cell monolayer cul- ture system to evaluate factors that modulate IgA transcytosis. Mucosal Immunol. 7, 818 -828 CrossRef Medline · DOI
  13. VanDussen, K. L., Marinshaw, J. M., Shaikh, N., Miyoshi, H., Moon, C., Tarr, P. I., Ciorba, M. A., and Stappenbeck, T. S. (2015) Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays. Gut 64, 911-920 CrossRef Medline · DOI · Paper page
  14. Schmid-Burgk, J. L., Chauhan, D., Schmidt, T., Ebert, T. S., Reinhardt, J., Endl, E., and Hornung, V. (2016) A genome-wide CRISPR (clustered reg- ularly interspaced short palindromic repeats) screen identifies NEK7 as an essential component of NLRP3 inflammasome activation. J. Biol. Chem. 291, 103-109 CrossRef Medline · DOI
  15. Xu, H., Yang, J., Gao, W., Li, L., Li, P., Zhang, L., Gong, Y. N., Peng, X., Xi, J. J., Chen, S., Wang, F., and Shao, F. (2014) Innate immune sensing of bacterial modifications of Rho GTPases by the Pyrin inflammasome. Na- ture 513, 237-241 CrossRef Medline · DOI
  16. Gao, W., Yang, J., Liu, W., Wang, Y., and Shao, F. (2016) Site-specific phosphorylation and microtubule dynamics control Pyrin inflammasome activation. Proc. Natl. Acad. Sci. U.S.A. 113, E4857-E4866 CrossRef Medline · DOI
  17. Liberzon, A. (2014) A description of the Molecular Signatures database (MSigDB) Web site. Methods Mol. Biol. 1150, 153-160 CrossRef Medline · DOI
  18. Fidder, H., Chowers, Y., Ackerman, Z., Pollak, R. D., Crusius, J. B., Livneh, A., Bar-Meir, S., Avidan, B., and Shinhar, Y. (2005) The familial Mediter- ranean fever (MEVF) gene as a modifier of Crohn's disease. Am. J. Gastro- enterol. 100, 338 -343 CrossRef Medline · DOI
  19. Villani, A. C., Lemire, M., Louis, E., Silverberg, M. S., Collette, C., Fortin, G., Nimmo, E. R., Renaud, Y., Brunet, S., Libioulle, C., Belaiche, J., Bitton, A., Gaudet, D., Cohen, A., Langelier, D., et al. (2009) Genetic variation in the familial Mediterranean fever gene (MEFV) and risk for Crohn's disease and ulcerative colitis. PLoS One 4, e7154 CrossRef Medline · DOI
  20. Yepiskoposyan, L., and Harutyunyan, A. (2007) Population genetics of familial Mediterranean fever: a review. Eur. J. Hum. Genet. 15, 911-916 CrossRef Medline · DOI
  21. Schwabe, A. D., and Peters, R. S. (1974) Familial Mediterranean fever in Armenians: analysis of 100 cases. Medicine 53, 453-462 CrossRef Medline · DOI
  22. Ozen, S., Aktay, N., Lainka, E., Duzova, A., Bakkaloglu, A., and Kallinich, T. (2009) Disease severity in children and adolescents with familial Mediterranean fever: a comparative study to explore environ- mental effects on a monogenic disease. Ann. Rheum. Dis. 68, 246 -248 CrossRef Medline · DOI
  23. Batu, E. D., Kara Eroglu, F., Tsoukas, P., Hausmann, J. S., Bilginer, Y., Kenna, M. A., Licameli, G. R., Fuhlbrigge, R. C., Ozen, S., and Dedeoglu, F. (2016) Periodic fever, aphthosis, pharyngitis, and adenitis syndrome: anal- ysis of patients from two geographic areas. Arthritis Care Res. (Hoboken) 68, 1859 -1865 CrossRef Medline · DOI
  24. Khachatryan, Z. A., Ktsoyan, Z. A., Manukyan, G. P., Kelly, D., Ghazaryan, K. A., and Aminov, R. I. (2008) Predominant role of host genetics in con- trolling the composition of gut microbiota. PLoS One 3, e3064 CrossRef Medline · DOI
  25. Marker, R. E., and Lawson, E. J. (1938) Sterols. XXXIII. 3,11-Dihydroxy- 12-ketocholanic acid and derivatives. J. Am. Chem. Soc. 60, 1334 -1337 CrossRef · DOI
  26. Hershberg, E. B., Herzog, H. L., Coan, S. B., Weber, L., and Jevnik, M. (1952) Cortisone intermediates. I. A new preparation of 12␣-bromo- 24,24-diphenylchol-23-en-3␣-ol-11-one acetate. J. Am. Chem. Soc. 74, 2585-2589 CrossRef · DOI
  27. Edenharder, R., and Mielek, K. (1984) Epimerization, oxidation and reduc- tion of bile acids by Eubacterium lentum. Syst. Appl. Microbiol. 5, 287-298 CrossRef · DOI
  28. Edenharder, R., and Hammann, R. (1985) Deoxycholic acid methyl es- ter-a novel bacterial metabolite of cholic acid. Syst. Appl. Microbiol. 6, 18 -22 CrossRef · DOI
  29. Kelsey, M. I., and Sexton, S. A. (1976) The biosynthesis of ethyl esters of lithocholic acid and isolithocholic acid by rat intestinal microflora. J. Ste- roid Biochem. 7, 641-647 CrossRef Medline · DOI

Authors
Alimov, I., Menon, S., Cochran, N., Maher, R., Wang, Q., Alford, J., Concannon, J. B., Yang, Z., Harrington, E., Llamas, L., Lindeman, A., Hoffman, G., Schuhmann, T., Russ, C., Reece-Hoyes, J., Canham, S. M., & Cai, X.
Affiliations
Novartis (Switzerland) (CH)
Corresponding author
  • Canham, Stephen M.
  • Cai, Xinming
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2019-03
Volume
294
Issue
10
Pages
3359-3366
ISSN
0021-9258 (ISSN-L)
OpenAlex
W2910666367
Cited by
64
References
43
Citations by year
2026: 9 · 2025: 9 · 2024: 4 · 2023: 8 · 2022: 12 · 2021: 9 · 2020: 9 · 2019: 3
FWCI
2.73
Type
journal article
Language
en
Open access
Locations
  • Journal of Biological Chemistry (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Inflammasome and immune disorders
  • Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
Keywords
bile acid analogues, pyrin inflammasome, MEFV gene, gut microbiota metabolites, pyroptosis, intestinal immune homeostasis, intestinal epithelial cells, myeloid cells, autoimmune disease
MeSH terms
Gastrointestinal Microbiome, Pyrin, THP-1 Cells, Bile Acids and Salts, Epithelial Cells, Humans, Intestinal Mucosa, Immunity, Mucosal, Myeloid Cells, Inflammasomes

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