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Acetogenesis in Deep Subseafloor Sediments of The Juan de Fuca Ridge Flank: A Synthesis of Geochemical, Thermodynamic, and Gene-based Evidence
Abstract
In deep subsurface sediments of the Juan de Fuca Ridge Flank, porewater acetate that is depleted in 13 C relative to sedimentary organic matter indicates an acetogenic component to total acetate production. Thermodynamic calculations indicate common fermentation products or lignin monomers as potential substrates for acetogenesis. The classic autotrophic reaction may contribute as well, provided that dihydrogen (H 2 ) concentrations are not drawn down to the thermodynamic thresholds of the energetically more favorable processes of sulfate reduction and methanogenesis. A high diversity of novel formyl tetrahydrofolate synthetase (fhs) genes throughout the upper half of the sediment column indicates the genetic potential for acetogenesis. Our results suggest that a substantial fraction of the acetate produced in marine sediment porewaters may derive from acetogenesis, in addition to the conventionally invoked sources fermentation and sulfate reduction.
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“Sulfate reducers, acetogens and methanogens appear to be the most common inhabitants of ecosystems situated deep within the crust [184–188].”
From Early bioenergetic evolution (2013) · cites this paper as [187]
Citations
Cites
Bergey's Manual of Systematic Bacteriology
(1990) · Annals of Internal Medicine · doi:10.7326/0003-4819-112-5-391_3 · Cited by 15,633
ARB: a software environment for sequence data
Ludwig, W. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh293 · Cited by 6,714
Energy conservation in chemotrophic anaerobic bacteria
Thauer, R. K., Jungermann, K., & Decker, K. (1977) · Bacteriological Reviews · doi:10.1128/br.41.1.100-180.1977 · Cited by 4,146
Froelich, P. N., Klinkhammer, G. P., Bender, M. L., Luedtke, N. A., Heath, G. R., Cullen, D., Dauphin, P., Hammond, D., Hartman, B., & Maynard, V. (1979) · Geochimica et Cosmochimica Acta · doi:10.1016/0016-7037(79)90095-4 · Cited by 3,368
Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis
von Wintzingerode, F., Göbel, U. B., & Stackebrandt, E. S. (1997) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.1997.tb00351.x · Cited by 2,085
Lignins. Occurrence, Formation, Structure and Reactions
Sarkanen, K. V., & Ludwig, C. H. (1971) · Medical Entomology and Zoology · Cited by 2,008
δ13C Measurements as Indicators of Carbon Flow in Marine and Freshwater Ecosystems
Fry, B., & Sherr, E. B. (1989) · Ecological studies · doi:10.1007/978-1-4612-3498-2_12 · Cited by 1,753
The Role of Time and Energy in Food Preference
Emlen, J. M. (1966) · The American Naturalist · doi:10.1086/282455 · Cited by 1,494
(1982) · Medical Entomology and Zoology · Cited by 1,294
Genome Streamlining in a Cosmopolitan Oceanic Bacterium
Giovannoni, S. J., Tripp, H. J., Givan, S. A., Podar, M., Vergin, K. L., Baptista, D., Bibbs, L., Eads, J. R., Richardson, T. H., Noordewier, M. O., et al. (2005) · Science · doi:10.1126/science.1114057 · Cited by 1,224
Research works printed but not linked: 40
- Cappenberg T E, 1974, Ant v Leeuwenhoek, 56, 1247
- D'Hondt S L, 2003, Shipboard Scientific Party
- Fisher , A T , Urabe , T and Klaus A and the Expedition 301 Scientists. 2005. 301 http://publications.iodp.org/proceedings/301/301toc.htmProc IODP, Init Repts
- Fry B, 1984, Cont Mar Science, 27, 13
- Graber K K, 2002, ODP Tech Note 31
- 10.1111/j.1574-6941.2002.tb00914.x · DOI
- 10.1111/j.1574-6976.1997.tb00319.x · DOI
- 10.1128/MMBR.30.4.732-738.1966 · DOI
- Stumm W, 1981, An introduction emphasizing chemical equilibria in natural waters., 1022p
- 10.1128/MMBR.41.1.100-180.1977 · DOI · Paper page
- Valentine D L, 2001, Cellular Origin, Life in Extreme Habitats and Astrobiology
- Andreesen J R, 1970, Arch Microbiol, 72, 154
- Braun M, 1982, Zbl Bakt Hyg I Abt Orig C3, 368, 376
- 10.1128/MMBR.29.3.359-363.1965 · DOI
- Chang I S, 1998, J Microbiol Biotech, 8, 134
- Davydova-Charakhch'yan I A, 1992, Microbiology, 61, 306
- 10.1016/j.resmic.2004.03.003 · DOI
- 10.1007/BF00454917 · DOI
- Emde R, 1987, Arch Microbiol, 157, 1
- 10.1007/BF00264381 · DOI
- 10.1016/S0944-5013(11)80021-2 · DOI
- 10.1111/j.1462-2920.2007.01306.x · DOI
- Hori T, Expression profiling of bacterial FTHFS genes reveals physiological peculiarity of acetogenic bacteria in a thermophilic methanogenic bioreactor
- 10.1007/BF00402132 · DOI
- 10.1007/BF01567310 · DOI
- 10.1128/AEM.65.6.2300-2306.1999 · DOI
- 10.1007/BF00248485 · DOI
- Liesack W, 1994, Arch Microbiol, 162, 85
- 10.1128/AEM.59.5.1325-1331.1993 · DOI
- 10.1111/j.1574-6968.1990.tb13839.x · DOI
- 10.1128/AEM.61.11.3832-3835.1995 · DOI
- Rieu-Lesme F, 1996, FEMS Microbiol Lett, 140, 281
- 10.1073/pnas.0407486101 · DOI
- 10.1007/s00203-004-0703-3 · DOI
- Sembiring T, 1989, Appl Microbiol Biotechnology, 31, 89
- 10.1007/s002030000229 · DOI
- Sorokin D Y, 1995, Mikrobiologiya, 64, 354
- 10.1007/BF00245151 · DOI
- Wagman D D, 1968, J Phys Chem Ref Data, 11
- 10.1007/BF02146190 · DOI
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Microbial Ecology of the Dark Ocean above, at, and below the Seafloor
Orcutt, B. N., Sylvan, J. B., Knab, N. J., & Edwards, K. J. (2011) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00039-10 · Cited by 692
He, Y., Li, M., Perumal, V., Feng, X., Fang, J., Xie, J., Sievert, S. M., & Wang, F. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.35 · Cited by 340
Parkes, R. J., Cragg, B. A., Roussel, E. G., Webster, G., Weightman, A. J., & Sass, H. (2014) · Marine Geology · doi:10.1016/j.margeo.2014.02.009 · Cited by 311
Sousa, F. L., Thiergart, T., Landan, G., Nelson-Sathi, S., Pereira, I. A. C., Allen, J. F., Lane, N., & Martin, W. F. (2013) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2013.0088 · Cited by 286
“Sulfate reducers, acetogens and methanogens appear to be the most common inhabitants of ecosystems situated deep within the crust [184–188].”
BackgroundEnergetics and Application of Heterotrophy in Acetogenic Bacteria
Schuchmann, K., & Müller, V. (2016) · Applied and Environmental Microbiology · doi:10.1128/aem.00882-16 · Cited by 297
Metadata
- Authors
- Lever, M. A., Heuer, V. B., Morono, Y., Masui, N., Schmidt, F., Alperin, M. J., Inagaki, F., Hinrichs, K.-U., & Teske, A.
- Affiliations
- University of North Carolina at Chapel Hill (US)
- University of Bremen (DE)
- Japan Agency for Marine-Earth Science and Technology (JP)
- ORCID
- Venue
- Geomicrobiology Journal
- Publisher
- Informa UK Limited
- Published
- 2010-02-26
- Volume
- 27
- Issue
- 2
- Pages
- 183-211
- ISSN
- 0149-0451 (ISSN-L)
- 1521-0529
- OpenAlex
- W1982075342
- Cited by
- 86
- References
- 265
- Citations by year
- 2026: 2 · 2025: 2 · 2024: 1 · 2023: 5 · 2022: 1 · 2021: 4 · 2020: 5 · 2019: 9 · 2018: 3 · 2017: 6 · 2016: 8 · 2015: 6 · 2014: 8 · 2013: 7 · 2012: 7
- FWCI
- 7.23
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Geomicrobiology Journal (publishedVersion)
- Publication Database GFZ (GFZ German Research Centre for Geosciences) (submittedVersion)
- Topics
- Physical Sciences › Environmental Science › Environmental Chemistry › Methane Hydrates and Related Phenomena
- Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
- Physical Sciences › Environmental Science › Environmental Engineering › Microbial Fuel Cells and Bioremediation
- Keywords
- acetogenesis, Juan de Fuca Ridge, lignin monomers, fermentation substrate, molecular hydrogen, sulfate reduction, methanogenesis, marine sediment geochemistry
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