Cited by 35RNA Research and SplicingRNA and protein synthesis mechanismsGene Regulatory Network Analysis

Homeostasis in the Central Dogma of molecular biology: the importance of mRNA instability

Open access
Pérez-Ortín, José E., Tordera, Vicente, Chávez, Sebastián·2019·RNA Biology

Published version of a preprint

Abstract

Cell survival requires the control of biomolecule concentration, i.e. biomolecules should approach homeostasis. With information-carrying macromolecules, the particular concentration variation ranges depend on each type: DNA is not buffered, but mRNA and protein concentrations are homeostatically controlled, which leads to the ribostasis and proteostasis concepts. In recent years, we have studied the particular features of mRNA ribostasis and proteostasis in the model organism S. cerevisiae. Here we extend this study by comparing published data from three other model organisms: E. coli, S. pombe and cultured human cells. We describe how mRNA ribostasis is less strict than proteostasis. A constant ratio appears between the average decay and dilution rates during cell growth for mRNA, but not for proteins. We postulate that this is due to a trade-off between the cost of synthesis and the response capacity. This compromise takes place at the transcription level, but is not possible at the translation level as the high stability of proteins, versus that of mRNAs, precludes it. We hypothesize that the middle-place role of mRNA in the Central Dogma of Molecular Biology and its chemical instability make it more suitable than proteins for the fast changes needed for gene regulation.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1080/15476286.2019.1655352

Cites

11 of 11 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Pérez-Ortín, J. E., Tordera, V., & Chávez, S.
Affiliations
  • Universitat de València (ES)
  • Instituto de Biomedicina de Sevilla (ES)
Corresponding author
Pérez-Ortín, José E.
Venue
RNA Biology
Published
2019-09-02
Volume
16
Issue
12
Pages
1659-1666
ISSN
  • 1547-6286 (ISSN-L)
  • 1555-8584
OpenAlex
W2968760174
Cited by
35
References
11
Citations by year
2026: 2 · 2025: 6 · 2024: 5 · 2023: 3 · 2022: 8 · 2021: 7 · 2020: 4
FWCI
1.57
Type
journal article
Language
en
Open access
Locations
  • RNA Biology (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
  • RISalud Institutional Health Repository of Andalucía (submittedVersion, other-oa)
  • DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion)
  • Repository of Digital Objects for Teaching Research and Culture (University of Valencia) (submittedVersion, cc-by-nc)
Funders
  • de Economía, Innovación, Ciencia y Empleo, Junta de Andalucía (P12-BIO1938MO)
  • Conselleria d’Educació, Investigació, Cultura i Esport (PROMETEO II 2015/006)
  • Ministerio de Ciencia, Innovación y Universidades (BFU2016-77728-C3-3-P, BFU2015-71978-REDT, BFU2016-77728-C3-1-P)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gene Regulatory Network Analysis
Keywords
proteostasis, mRNA stability, mRNA degradation, protein stability, response capacity, gene expression regulation, central dogma, Saccharomyces cerevisiae, Escherichia coli, Schizosaccharomyces pombe, human cells
MeSH terms
Proteostasis, DNA, Escherichia coli, Gene Expression Regulation, HeLa Cells, Homeostasis, Humans, Proteins, RNA, Messenger, Saccharomyces cerevisiae, Schizosaccharomyces, Transcription, Genetic, Evolution, Molecular, RNA Stability

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review