Microglial phagocytosis dysfunction in stroke is driven by energy depletion and induction of autophagy
Open accessPublished version of a preprint
Abstract
ABSTRACT Microglial phagocytosis is rapidly emerging as a therapeutic target in neurodegenerative and neurological disorders. An efficient removal of cellular debris is necessary to prevent buildup damage of neighbor neurons and the development of an inflammatory response. As the brain professional phagocytes, microglia are equipped with an array of mechanisms that enable them to recognize and degrade several types of cargo, including neurons undergoing apoptotic cell death. While microglia are very competent phagocytes of apoptotic cells under physiological conditions, here we report their dysfunction in mouse and monkey ( Macaca fascicularis and Callithrix jacchus ) models of stroke by transient occlusion of the medial cerebral artery (tMCAo). The impairment of both engulfment and degradation was related to energy depletion triggered by oxygen and nutrients deprivation (OND), which led to reduced process motility, lysosomal depletion, and the induction of a protective autophagy response in microglia. Basal autophagy, which is in charge of removing and recycling intracellular elements, was critical to maintain microglial physiology, including survival and phagocytosis, as we determined both in vivo and in vitro using knock-out models of autophagy genes and the autophagy inhibitor MRT68921. Notably, the autophagy inducer rapamycin partially prevented the phagocytosis impairment induced by tMCAo in vivo but not by OND in vitro. These results suggest a more complex role of microglia in stroke than previously acknowledged, classically related to the inflammatory response. In contrast, here we demonstrate the impairment of apoptotic cell phagocytosis, a microglial function critical for brain recovery. We propose that phagocytosis is a therapeutic target yet to be explored and provide evidence that it can be modulated in vivo using rapamycin, setting the stage for future therapies for stroke patients.
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Partial inhibition of mTOR can pause mouse blastocyst development, preserving stemness for weeks in culture.
“Partial inhibition of mTOR, which mimics nutrient starvation and activates autophagy, can pause mouse blastocyst development, preserving “stemness” for weeks in culture.16”
From The lysosome and proteostatic stress at the intersection of pediatric neurological disorders and adult neurodegenerative diseases (2025) · cites this paper as [16]
The Results section, “Rapamycin prevents phagocytosis impairment” (page unavailable), discusses mTOR inhibition and autophagy in a mouse stroke model. Searches for blastocysts, stemness, and paused embryonic development found no passage in our copy addressing whether mTOR inhibition preserves mouse blastocysts for weeks in culture. (LLM, conf=0.78)
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Cites
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Lane-Donovan, C., Paredes, M., & Kao, A. W. (2025) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2025.102854 · Cited by 3 · see citing works
- Authors
- Beccari, S., Sierra-Torre, V., Valero, J., Pereira-Iglesias, M., García-Zaballa, M., Soria, F. N., De Las Heras-Garcia, L., Carretero-Guillen, A., Capetillo-Zarate, E., Domercq, M., Huguet, P. R., Ramonet, D., Osman, A., Han, W., Dominguez, C., Faust, T. E., Touzani, O., Pampliega, O., Boya, P., Schafer, D., Mariño, G., Canet-Soulas, E., Blomgren, K., Plaza-Zabala, A., & Sierra, A.
- Affiliations
- University of the Basque Country (ES)
- Glial Cell Biology Labb, Department of Biochemistry and Molecular Biology, Achucarro Basque Center for Neuroscience, 48940, Leioa, Bizkaia, Spain
- Ikerbasque (ES)
- Lyon 1 Université (FR)
- Karolinska Institutet (SE)
- University of Massachusetts Chan Medical School (US)
- Centre National de la Recherche Scientifique (FR)
- University of Fribourg (CH)
- INSERM U1060 CarMeN, Université Claude Bernard Lyon 1 - IRIS team, CarMeN, bat. B13, gpt hosp. Est, 59 bld Pinel, 69500, Bron, Auvergne-Rhône-Alpes, France
- Karolinska University Hospital (SE)
- Corresponding author
- Sierra, Amanda
- ORCID
- Beccari, Sol
- Sierra-Torre, Virginia
- Valero, Jorge
- Soria, Federico N.
- Carretero-Guillen, Alejandro
- Capetillo-Zarate, Estibaliz
- Domercq, Maria
- Huguet, Paloma R.
- Ramonet, David
- Osman, Ahmed
- Han, Wei
- Faust, Travis E.
- Pampliega, Olatz
- Boya, Patricia
- Schafer, Dorothy
- Mariño, Guillermo
- Canet-Soulas, Emmanuelle
- Blomgren, Klas
- Sierra, Amanda
- Venue
- Autophagy
- Publisher
- Informa UK Limited
- Published
- 2023-01-20
- Volume
- 19
- Issue
- 7
- Pages
- 1952-1981
- ISSN
- 1554-8627 (ISSN-L)
- 1554-8635
- PMC
- PMC10283420
- OpenAlex
- W4313892827
- Cited by
- 89
- References
- 13
- Citations by year
- 2026: 20 · 2025: 30 · 2024: 33 · 2023: 6
- FWCI
- 9.17
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Autophagy (publishedVersion, cc-by-nc-nd)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Hispana (publishedVersion, other-oa)
- HAL (submittedVersion, cc-by-nc-nd)
- Communities in ADDI (University of the Basque Country) (submittedVersion, cc-by-nc-nd)
- DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion, cc-by-nc-nd)
- Gredos (University of Salamanca) (submittedVersion, other-oa)
- Hispana (submittedVersion, cc-by-nc-nd)
- Funders
- Basque Government (ELKARTEK KK-2020/00034;, PIBA 2020_1_0030)
- Spanish Ministry of Science and Innovation (RYC-2016–20480, RTI2018-099267-B-I00, RYC-2013-12817, RTI2018–097948-A-100)
- Tatiana Foundation (P-048-FTPGB 2018)
- Topics
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Immunology and Microbiology › Immunology › Phagocytosis and Immune Regulation
- Keywords
- microglial phagocytosis, stroke, energy depletion, macroautophagy, rapamycin, transient middle cerebral artery occlusion, microglial motility, neuroinflammation, therapeutic target, single-cell RNA sequencing, marmoset model
- MeSH terms
- Beclin-1, Animals, Autophagy, Oxygen, Phagocytosis, Microglia, Sirolimus, Stroke, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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