Dynamic behavior of GFP-CLIP-170 reveals fast protein turnover on microtubule plus ends
Open accessAbstract
Microtubule (MT) plus end-tracking proteins (+TIPs) specifically recognize the ends of growing MTs. +TIPs are involved in diverse cellular processes such as cell division, cell migration, and cell polarity. Although +TIP tracking is important for these processes, the mechanisms underlying plus end specificity of mammalian +TIPs are not completely understood. Cytoplasmic linker protein 170 (CLIP-170), the prototype +TIP, was proposed to bind to MT ends with high affinity, possibly by copolymerization with tubulin, and to dissociate seconds later. However, using fluorescence-based approaches, we show that two +TIPs, CLIP-170 and end-binding protein 3 (EB3), turn over rapidly on MT ends. Diffusion of CLIP-170 and EB3 appears to be rate limiting for their binding to MT plus ends. We also report that the ends of growing MTs contain a surplus of sites to which CLIP-170 binds with relatively low affinity. We propose that the observed loss of fluorescent +TIPs at plus ends does not reflect the behavior of single molecules but is a result of overall structural changes of the MT end.
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EBs and their partners, including MCAK, exchange rapidly on binding sites at microtubule tips, whereas the sites themselves turn over relatively slowly.
“This finding supports the view that the EBs and their partners, including MCAK, exchange rapidly on the binding sites at MT tips (dwell times of 1 s or less), whereas the sites themselves turn over relatively slowly (on the order of several seconds) [12, 17].”
From In vitro reconstitution of the functional interplay between MCAK and EB3 at microtubule plus ends (2010) · cites this paper as [17]
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Dynamic instability of microtubule growth
Mitchison, T., & Kirschner, M. (1984) · Nature · doi:10.1038/312237a0 · Cited by 3,337 · see citing works
Mechanism of mitotic block and inhibition of cell proliferation by taxol at low concentrations.
Jordan, M. A., Toso, R. J., Thrower, D., & Wilson, L. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.20.9552 · Cited by 1,095 · see citing works
Stepanova, T., Slemmer, J., Hoogenraad, C. C., Lansbergen, G. W. A., Dortland, B. R., Zeeuw, C. I. D., Grosveld, F. G., van Cappellen, G. W. A., Akhmanova, A. S., & Galjart, N. (2003) · Journal of Neuroscience · doi:10.1523/jneurosci.23-07-02655.2003 · Cited by 702 · see citing works
Self-citationThe Photon Counting Histogram in Fluorescence Fluctuation Spectroscopy
Chen, Y., Müller, J. D., So, P. T. C., & Gratton, E. (1999) · Biophysical Journal · doi:10.1016/s0006-3495(99)76912-2 · Cited by 683 · see citing works
CLIP-170 Highlights Growing Microtubule Ends In Vivo
Perez, F., Diamantopoulos, G. S., Stalder, R., & Kreis, T. E. (1999) · Cell · doi:10.1016/s0092-8674(00)80656-x · Cited by 397 · see citing works
CLIP-170 links endocytic vesicles to microtubules
Pierre, P., Scheel, J., Rickard, J. E., & Kreis, T. E. (1992) · Cell · doi:10.1016/0092-8674(92)90240-d · Cited by 369 · see citing works
Microtubule “Plus-End-Tracking Proteins”
Schuyler, S. C., & Pellman, D. S. (2001) · Cell · doi:10.1016/s0092-8674(01)00364-6 · Cited by 366 · see citing works
Peris, L., Théry, M., Fauré, J., Saoudi, Y., Lafanéchère, L., Chilton, J. K., Gordon‐Weeks, P. R., Galjart, N., Bornens, M., Wordeman, L. G., et al. (2006) · The Journal of Cell Biology · doi:10.1083/jcb.200512058 · Cited by 347 · see citing works
Self-citationMicrotubule plus-end-tracking proteins: mechanisms and functions
Akhmanova, A. S., & Hoogenraad, C. C. (2004) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2004.11.001 · Cited by 319 · see citing works
Self-citationCLASPs Attach Microtubule Plus Ends to the Cell Cortex through a Complex with LL5β
Lansbergen, G. W. A., Grigoriev, I., Mimori‐Kiyosue, Y., Ohtsuka, T., Higa, S., Kitajima, I., Demmers, J., Galjart, N., Houtsmuller, A. B., Grosveld, F. G., et al. (2006) · Developmental Cell · doi:10.1016/j.devcel.2006.05.012 · Cited by 307 · see citing works
Self-citationStructural Basis of Microtubule Plus End Tracking by XMAP215, CLIP-170, and EB1
Slep, K. C., & Vale, R. D. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.07.023 · Cited by 254 · see citing works
Cytoplasmic linker proteins promote microtubule rescue in vivo
Komarova, Y. A., Akhmanova, A. S., Kojima, S.-I., Galjart, N., & Borisy, G. G. (2002) · The Journal of Cell Biology · doi:10.1083/jcb.200208058 · Cited by 246 · see citing works
Self-citationMicrotubule Plus End: A Hub of Cellular Activities
Lansbergen, G. W. A., & Akhmanova, A. S. (2006) · Traffic · doi:10.1111/j.1600-0854.2006.00400.x · Cited by 235 · see citing works
Self-citationHow does taxol stabilize microtubules?
Arnal, I., & Wade, R. H. (1995) · Current Biology · doi:10.1016/s0960-9822(95)00180-1 · Cited by 235 · see citing works
EB1 and EB3 Control CLIP Dissociation from the Ends of Growing Microtubules
Komarova, Y. A., Lansbergen, G. W. A., Galjart, N., Grosveld, F. G., Borisy, G. G., & Akhmanova, A. S. (2005) · Molecular Biology of the Cell · doi:10.1091/mbc.e05-07-0614 · Cited by 200 · see citing works
Self-citationKey Interaction Modes of Dynamic +TIP Networks
Srinivas, H., Okhrimenko, O., Jaussi, R., et al. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.07.013 · Cited by 180 · see citing works
Conformational changes in CLIP-170 regulate its binding to microtubules and dynactin localization
Lansbergen, G. W. A., Komarova, Y. A., Modesti, M., et al. (2004) · The Journal of Cell Biology · doi:10.1083/jcb.200402082 · Cited by 178 · see citing works
Wittmann, T., & Waterman, C. M. (2005) · The Journal of Cell Biology · doi:10.1083/jcb.200412114 · Cited by 165 · see citing works
Charpilienne, A., Nejmeddine, M., Berois, M., et al. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m101935200 · Cited by 157 · see citing works
Role of CLASP2 in Microtubule Stabilization and the Regulation of Persistent Motility
Drabek, K., van Ham, M., Stepanova, T., Draegestein, K., van Horssen, R., Sayas, C. L., Akhmanova, A. S., ten Hagen, T., Smits, R., Fodde, R., et al. (2006) · Current Biology · doi:10.1016/j.cub.2006.09.065 · Cited by 156 · see citing works
Self-citationAnalyzing Intracellular Binding and Diffusion with Continuous Fluorescence Photobleaching
Wachsmuth, M., Weidemann, T., Müller, G., Hoffmann‐Rohrer, U., Knoch, T., Waldeck, W., & Langowski, J. (2003) · Biophysical Journal · doi:10.1016/s0006-3495(03)70059-9 · Cited by 135 · see citing works
Self-citationSystematic evaluation of FRAP experiments performed in a confocal laser scanning microscope
Seiffert, S., & Oppermann, W. (2005) · Journal of Microscopy · doi:10.1111/j.1365-2818.2005.01512.x · Cited by 129 · see citing works
Akhmanova, A. S., Mausset-Bonnefont, A.-L., van Cappellen, W. A., et al. (2005) · Genes & Development · doi:10.1101/gad.344505 · Cited by 126 · see citing works
Self-citationCumulant Analysis in Fluorescence Fluctuation Spectroscopy
Müller, J. D. (2004) · Biophysical Journal · doi:10.1529/biophysj.103.037887 · Cited by 124 · see citing works
Functional analysis of CLIP-115 and its binding to microtubules
Hoogenraad, C. C., Akhmanova, A. S., Grosveld, F. G., Zeeuw, C. I. D., & Galjart, N. (2000) · Journal of Cell Science · doi:10.1242/jcs.113.12.2285 · Cited by 116 · see citing works
Self-citationCLIP-170/Tubulin-Curved Oligomers Coassemble at Microtubule Ends and Promote Rescues
Arnal, I., Heichette, C., Diamantopoulos, G. S., & Chrétien, D. (2004) · Current Biology · doi:10.1016/j.cub.2004.11.055 · Cited by 111 · see citing works
Quick tour of fluorescence correlation spectroscopy from its inception
Elson, E. L. (2004) · Journal of Biomedical Optics · doi:10.1117/1.1779234 · Cited by 98 · see citing works
Intracellular applications of fluorescence correlation spectroscopy: prospects for neuroscience
Kim, S. A., & Schwille, P. (2003) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2003.09.002 · Cited by 85 · see citing works
Folker, E. S., Baker, B. M., & Goodson, H. V. (2005) · Molecular Biology of the Cell · doi:10.1091/mbc.e04-12-1106 · Cited by 82 · see citing works
Lele, T. P., & Ingber, D. E. (2005) · Biophysical Chemistry · doi:10.1016/j.bpc.2005.10.007 · Cited by 35 · see citing works
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Mammalian end binding proteins control persistent microtubule growth
Komarova, Y., De Groot, C. O., Grigoriev, I., Gouveia, S. M., Munteanu, E. L., Schober, J. M., Honnappa, S., Buey, R. M., Hoogenraad, C. C., Dogterom, M., et al. (2009) · Journal of Cell Biology · doi:10.1083/jcb.200807179 · Cited by 387 · see citing works
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Montenegro Gouveia, S., Leslie, K., Kapitein, L. C., Buey, R. M., Grigoriev, I., Wagenbach, M., Smal, I., Meijering, E., Hoogenraad, C. C., Wordeman, L., et al. (2010) · Current Biology · doi:10.1016/j.cub.2010.08.020 · Cited by 147 · see citing works
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- Authors
- Dragestein, K. A., van Cappellen, W. A., van Haren, J., Tsibidis, G. D., Akhmanova, A., Knoch, T. A., Grosveld, F., & Galjart, N.
- Affiliations
- 1Department of Cell Biology and Genetics
- 2Department of Reproduction and Development, Erasmus Medical Center, 3000 DR Rotterdam, Netherlands
- Foundation for Research and Technology Hellas (GR)
- Corresponding author
- Galjart, Niels
- Venue
- The Journal of Cell Biology
- Publisher
- Rockefeller University Press
- Published
- 2008-02-18
- Volume
- 180
- Issue
- 4
- Pages
- 729-737
- ISSN
- 0021-9525 (ISSN-L)
- 1540-8140
- PMC
- PMC2265578
- OpenAlex
- W2129158700
- Cited by
- 116
- References
- 30
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 2 · 2023: 4 · 2022: 3 · 2021: 3 · 2020: 2 · 2019: 6 · 2018: 4 · 2017: 5 · 2016: 5 · 2015: 5 · 2014: 14 · 2013: 7 · 2012: 7
- FWCI
- 6.85
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- cc-by-nc-sa
- Locations
- The Journal of Cell Biology (publishedVersion)
- PubMed Central (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (publishedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
- RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
- Health Sciences › Medicine › Oncology › Cancer Treatment and Pharmacology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
- Keywords
- CLIP-170, EB3, microtubule plus ends, plus-end tracking proteins, protein turnover, diffusion-limited binding, GFP fusion protein, cell polarity
- MeSH terms
- Animals, Binding Sites, Chlorocebus aethiops, HeLa Cells, Humans, Mice, Transgenic, Microtubule-Associated Proteins, Microtubules, Neoplasm Proteins, Protein Binding, Recombinant Fusion Proteins, Time Factors, COS Cells, Amino Acid Motifs, Protein Transport, Green Fluorescent Proteins, Mice, Rats
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