SNX17 protects integrins from degradation by sorting between lysosomal and recycling pathways
Open accessAbstract
The FERM-like domain–containing sorting nexins of the SNX17/SNX27/SNX31 family have been proposed to mediate retrieval of transmembrane proteins from the lysosomal pathway. In this paper, we describe a stable isotope labeling with amino acids in culture–based quantitative proteomic approach that allows an unbiased, global identification of transmembrane cargoes that are rescued from lysosomal degradation by SNX17. This screen revealed that several integrins required SNX17 for their stability, as depletion of SNX17 led to a loss of β1 and β5 integrins and associated a subunits from HeLa cells as a result of increased lysosomal degradation. SNX17 bound to the membrane distal NPXY motif in β integrin cytoplasmic tails, thereby preventing lysosomal degradation of β integrins and their associated a subunits. Furthermore, SNX17-dependent retrieval of integrins did not depend on the retromer complex. Consistent with an effect on integrin recycling, depletion of SNX17 also caused alterations in cell migration. Our data provide mechanistic insight into the retrieval of internalized integrins from the lysosomal degradation pathway, a prerequisite for subsequent recycling of these matrix receptors.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
SNX17, specifically through its FERM domain, recognizes an NPxY motif in the cytoplasmic domains of LRP1, APP and β1 integrins.
“SNX17, specifically through its FERM domain, recognizes an NPxY motif in the cytoplasmic domains of LRP1, APP and β1 integrins [31], [32], [34], [35].”
From Sorting nexin 17 regulates ApoER2 recycling and reelin signaling (2014) · cites this paper as [34]
The Results and discussion (Fig. 4 F–H; page unavailable) show that SNX17’s FERM-like domain binds the membrane-distal NPXY motif in the β1-integrin cytoplasmic tail. The paper mentions SNX17 in connection with APP trafficking and cites earlier work on its cargo binding, but our copy does not state that this domain recognizes NPXY motifs in APP or LRP1 cytoplasmic tails. (LLM, conf=0.87)
Experimental — accuracy not yet measuredSNX17 mediates the recycling and degradation of β1-integrins.
“and mediates the recycling and degradation of β1-integrins [33], [34].”
From Sorting nexin 17 regulates ApoER2 recycling and reelin signaling (2014) · cites this paper as [34]
SNX17 avoids integrin lysosomal degradation and aids in more efficient recycling from the EEA1/Rab4-positive compartment by binding to the distal NPxY motif of the β1 subunit.
“It is worth mentioning here that in contrast to the role in ApoER2 trafficking, SNX17 accomplishes a different role in the trafficking and degradation of integrin α5β1; by binding to the distal NPxY motif of the β1 subunit, SNX17 avoids integrin lysosomal degradation and aids in a more efficient recycling from the EEA1/Rab4-positive compartment.”
From Sorting nexin 17 regulates ApoER2 recycling and reelin signaling (2014) · cites this paper as [34]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Muhammad, A., Flores, I., Zhang, H., Yu, R., Staniszewski, A., Planel, E., Herman, M., Ho, L., Kreber, R., Honig, L. S., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0802545105 · Cited by 248 · see citing works
Flagged first, then by citations
Research works printed but not linked: 36
- Arighi C.N. Hartnell L.M. Aguilar R.C. Haft C.R. Bonifacino J.S. 2004 Role of the mammalian retromer in sorting of the cation-independent mannose 6-phosphate receptor. J. Cell Biol. 165: 123– 133 10.1083/jcb.200312055 15078903 PMC2172094 · DOI
- Bass M.D. Williamson R.C. Nunan R.D. Humphries J.D. Byron A. Morgan M.R. Martin P. Humphries M.J. 2011 A syndecan-4 hair trigger initiates wound healing through caveolin- and RhoG-regulated integrin endocytosis. Dev. Cell. 21: 681– 693 10.1016/j.devcel.2011.08.007 21982645 PMC3202633 · DOI
- Burden J.J. Sun X.M. García A.B. Soutar A.K. 2004 Sorting motifs in the intracellular domain of the low density lipoprotein receptor interact with a novel domain of sorting nexin-17. J. Biol. Chem. 279: 16237– 16245 10.1074/jbc.M313689200 14739284 · DOI · Paper page
- Carlton J. Bujny M. Peter B.J. Oorschot V.M. Rutherford A. Mellor H. Klumperman J. McMahon H.T. Cullen P.J. 2004 Sorting nexin-1 mediates tubular endosome-to-TGN transport through coincidence sensing of high- curvature membranes and 3-phosphoinositides. Curr. Biol. 14: 1791– 1800 10.1016/j.cub.2004.09.077 15498486 · DOI
- Carlton J. Bujny M. Rutherford A. Cullen P.J. 2005 Sorting nexins—unifying trends and new perspectives. Traffic. 6: 75– 82 10.1111/j.1600-0854.2005.00260.x 15634208 · DOI
- Caswell P.T. Vadrevu S. Norman J.C. 2009 Integrins: masters and slaves of endocytic transport. Nat. Rev. Mol. Cell Biol. 10: 843– 853 10.1038/nrm2799 19904298 · DOI
- Cullen P.J. 2008 Endosomal sorting and signalling: an emerging role for sorting nexins. Nat. Rev. Mol. Cell Biol. 9: 574– 582 10.1038/nrm2427 18523436 · DOI
- Cullen P.J. Korswagen H.C. 2012 Sorting nexins provide diversity for retromer-dependent trafficking events. Nat. Cell Biol. 14: 29– 37 10.1038/ncb2374 22193161 PMC3613977 · DOI
- Dozynkiewicz M.A. Jamieson N.B. Macpherson I. Grindlay J. van den Berghe P.V. von Thun A. Morton J.P. Gourley C. Timpson P. Nixon C. 2012 Rab25 and CLIC3 collaborate to promote integrin recycling from late endosomes/lysosomes and drive cancer progression. Dev. Cell. 22: 131– 145 10.1016/j.devcel.2011.11.008 22197222 PMC3507630 · DOI
- Ghai R. Mobli M. Norwood S.J. Bugarcic A. Teasdale R.D. King G.F. Collins B.M. 2011 Phox homology band 4.1/ezrin/radixin/moesin-like proteins function as molecular scaffolds that interact with cargo receptors and Ras GTPases. Proc. Natl. Acad. Sci. USA. 108: 7763– 7768 10.1073/pnas.1017110108 21512128 PMC3093529 · DOI
- Gomez T.S. Billadeau D.D. 2009 A FAM21-containing WASH complex regulates retromer-dependent sorting. Dev. Cell. 17: 699– 711 10.1016/j.devcel.2009.09.009 19922874 PMC2803077 · DOI
- Grant B.D. Donaldson J.G. 2009 Pathways and mechanisms of endocytic recycling. Nat. Rev. Mol. Cell Biol. 10: 597– 608 10.1038/nrm2755 19696797 PMC3038567 · DOI
- Harterink M. Port F. Lorenowicz M.J. McGough I.J. Silhankova M. Betist M.C. van Weering J.R. van Heesbeen R.G. Middelkoop T.C. Basler K. 2011 A SNX3-dependent retromer pathway mediates retrograde transport of the Wnt sorting receptor Wntless and is required for Wnt secretion. Nat. Cell Biol. 13: 914– 923 10.1038/ncb2281 21725319 PMC4052212 · DOI
- Huss M. Wieczorek H. 2009 Inhibitors of V-ATPases: old and new players. J. Exp. Biol. 212: 341– 346 10.1242/jeb.024067 19151208 · DOI
- Johannes L. Popoff V. 2008 Tracing the retrograde route in protein trafficking. Cell. 135: 1175– 1187 10.1016/j.cell.2008.12.009 19109890 · DOI
- Jović M. Naslavsky N. Rapaport D. Horowitz M. Caplan S. 2007 EHD1 regulates beta1 integrin endosomal transport: effects on focal adhesions, cell spreading and migration. J. Cell Sci. 120: 802– 814 10.1242/jcs.03383 17284518 · DOI
- Lane R.F. Raines S.M. Steele J.W. Ehrlich M.E. Lah J.A. Small S.A. Tanzi R.E. Attie A.D. Gandy S. 2010 Diabetes-associated SorCS1 regulates Alzheimer’s amyloid-beta metabolism: evidence for involvement of SorL1 and the retromer complex. J. Neurosci. 30: 13110– 13115 10.1523/JNEUROSCI.3872-10.2010 20881129 PMC3274732 · DOI
- Lauffer B.E. Melero C. Temkin P. Lei C. Hong W. Kortemme T. von Zastrow M. 2010 SNX27 mediates PDZ-directed sorting from endosomes to the plasma membrane. J. Cell Biol. 190: 565– 574 10.1083/jcb.201004060 20733053 PMC2928020 · DOI
- Lee J. Retamal C. Cuitiño L. Caruano-Yzermans A. Shin J.E. van Kerkhof P. Marzolo M.P. Bu G. 2008 Adaptor protein sorting nexin 17 regulates amyloid precursor protein trafficking and processing in the early endosomes. J. Biol. Chem. 283: 11501– 11508 10.1074/jbc.M800642200 18276590 PMC2431074 · DOI · Paper page
- Li J. Ballif B.A. Powelka A.M. Dai J. Gygi S.P. Hsu V.W. 2005 Phosphorylation of ACAP1 by Akt regulates the stimulation-dependent recycling of integrin beta1 to control cell migration. Dev. Cell. 9: 663– 673 10.1016/j.devcel.2005.09.012 16256741 · DOI
- Lobert V.H. Brech A. Pedersen N.M. Wesche J. Oppelt A. Malerød L. Stenmark H. 2010 Ubiquitination of alpha 5 beta 1 integrin controls fibroblast migration through lysosomal degradation of fibronectin-integrin complexes. Dev. Cell. 19: 148– 159 10.1016/j.devcel.2010.06.010 20643357 · DOI
- Margadant C. Monsuur H.N. Norman J.C. Sonnenberg A. 2011 Mechanisms of integrin activation and trafficking. Curr. Opin. Cell Biol. 23: 607– 614 10.1016/j.ceb.2011.08.005 21924601 · DOI
- Moser M. Legate K.R. Zent R. Fässler R. 2009 The tail of integrins, talin, and kindlins. Science. 324: 895– 899 10.1126/science.1163865 19443776 · DOI
- Roca-Cusachs P. Gauthier N.C. Del Rio A. Sheetz M.P. 2009 Clustering of α(5)β(1) integrins determines adhesion strength whereas α(v)β(3) and talin enable mechanotransduction. Proc. Natl. Acad. Sci. USA. 106: 16245– 16250 10.1073/pnas.0902818106 19805288 PMC2752568 · DOI
- Salicioni A.M. Gaultier A. Brownlee C. Cheezum M.K. Gonias S.L. 2004 Low density lipoprotein receptor-related protein-1 promotes beta1 integrin maturation and transport to the cell surface. J. Biol. Chem. 279: 10005– 10012 10.1074/jbc.M306625200 14699139 · DOI
- Seaman M.N. 2004 Cargo-selective endosomal sorting for retrieval to the Golgi requires retromer. J. Cell Biol. 165: 111– 122 10.1083/jcb.200312034 15078902 PMC2172078 · DOI · Paper page
- Seet L.F. Hong W. 2006 The Phox (PX) domain proteins and membrane traffic. Biochim. Biophys. Acta. 1761: 878– 896 16782399
- Stockinger W. Sailler B. Strasser V. Recheis B. Fasching D. Kahr L. Schneider W.J. Nimpf J. 2002 The PX-domain protein SNX17 interacts with members of the LDL receptor family and modulates endocytosis of the LDL receptor. EMBO J. 21: 4259– 4267 10.1093/emboj/cdf435 12169628 PMC126172 · DOI · Paper page
- Temkin P. Lauffer B. Jäger S. Cimermancic P. Krogan N.J. von Zastrow M. 2011 SNX27 mediates retromer tubule entry and endosome-to-plasma membrane trafficking of signalling receptors. Nat. Cell Biol. 13: 715– 721 10.1038/ncb2252 21602791 PMC3113693 · DOI
- Tiwari A. Jung J.J. Inamdar S.M. Brown C.O. Goel A. Choudhury A. 2011 Endothelial cell migration on fibronectin is regulated by syntaxin 6-mediated alpha5beta1 integrin recycling. J. Biol. Chem. 286: 36749– 36761 10.1074/jbc.M111.260828 21880737 PMC3196105 · DOI
- van Kerkhof P. Lee J. McCormick L. Tetrault E. Lu W. Schoenfish M. Oorschot V. Strous G.J. Klumperman J. Bu G. 2005 Sorting nexin 17 facilitates LRP recycling in the early endosome. EMBO J. 24: 2851– 2861 10.1038/sj.emboj.7600756 16052210 PMC1187941 · DOI · Paper page
- Wassmer T. Attar N. Bujny M.V. Oakley J. Traer C.J. Cullen P.J. 2007 A loss-of-function screen reveals SNX5 and SNX6 as potential components of the mammalian retromer. J. Cell Sci. 120: 45– 54 10.1242/jcs.03302 17148574 · DOI
- Wassmer T. Attar N. Harterink M. van Weering J.R. Traer C.J. Oakley J. Goud B. Stephens D.J. Verkade P. Korswagen H.C. Cullen P.J. 2009 The retromer coat complex coordinates endosomal sorting and dynein-mediated transport, with carrier recognition by the trans-Golgi network. Dev. Cell. 17: 110– 122 10.1016/j.devcel.2009.04.016 19619496 PMC2714578 · DOI
- White D.P. Caswell P.T. Norman J.C. 2007 αvβ3 and α5β1 integrin recycling pathways dictate downstream Rho kinase signaling to regulate persistent cell migration. J. Cell Biol. 177: 515– 525 10.1083/jcb.200609004 17485491 PMC2064808 · DOI
- Worby C.A. Dixon J.E. 2002 Sorting out the cellular functions of sorting nexins. Nat. Rev. Mol. Cell Biol. 3: 919– 931 10.1038/nrm974 12461558 · DOI
- Zech T. Calaminus S.D. Caswell P. Spence H.J. Carnell M. Insall R.H. Norman J. Machesky L.M. 2011 The Arp2/3 activator WASH regulates α5β1-integrin-mediated invasive migration. J. Cell Sci. 124: 3753– 3759 10.1242/jcs.080986 22114305 PMC3225265 · DOI
Cited by
Sorted by citations
To degrade or not to degrade: Mechanisms and significance of endocytic recycling
Cullen, P. J., & Steinberg, F. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0053-7 · Cited by 590 · see citing works
Self-citationRetriever is a multiprotein complex for retromer-independent endosomal cargo recycling
McNally, K. E., Faulkner, R., Steinberg, F., Gallon, M., Ghai, R., Pim, D., Langton, P., Pearson, N., Danson, C. M., Nägele, H., et al. (2017) · Nature Cell Biology · doi:10.1038/ncb3610 · Cited by 346 · see citing works
Self-citationSorting nexin 17 regulates ApoER2 recycling and reelin signaling
Sotelo, P., Farfán, P., Benitez, M. L., Bu, G., & Marzolo, M.-P. (2014) · PLoS ONE · doi:10.1371/journal.pone.0093672 · Cited by 47 · see citing works
- Authors
- Steinberg, F., Heesom, K. J., Bass, M. D., & Cullen, P. J.
- Affiliations
- University of Bristol (GB)
- Corresponding author
- Cullen, Peter J.
- Venue
- Journal of Cell Biology
- Publisher
- Rockefeller University Press
- Published
- 2012-04-09
- Volume
- 197
- Issue
- 2
- Pages
- 219-230
- ISSN
- 0021-9525 (ISSN-L)
- 1540-8140
- PMC
- PMC3328392
- OpenAlex
- W2123105928
- Cited by
- 206
- References
- 1
- Citations by year
- 2026: 4 · 2025: 17 · 2024: 14 · 2023: 9 · 2022: 19 · 2021: 12 · 2020: 12 · 2019: 18 · 2018: 18 · 2017: 13 · 2016: 10 · 2015: 13 · 2014: 14 · 2013: 27 · 2012: 6
- FWCI
- 9.08
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by-nc-sa
- Locations
- The Journal of Cell Biology (publishedVersion, cc-by-nc-sa)
- PubMed Central (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- Bristol Research (University of Bristol) (publishedVersion)
- White Rose Research Online (University of Leeds, The University of Sheffield, University of York) (acceptedVersion)
- Funders
- Wellcome Trust (088419, 089928/Z/09/Z)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Health Sciences › Medicine › Immunology and Allergy › Cell Adhesion Molecules Research
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Keywords
- SNX17, sorting nexins, integrins, lysosomal degradation, protein retrieval, recycling pathway, NPXY motif, retromer complex, cell migration, HeLa cells
- MeSH terms
- Biological Transport, Active, Cell Movement, HeLa Cells, Humans, Lysosomes, Integrin beta1, Protein Transport, Vesicular Transport Proteins, RNA Interference, RNA, Small Interfering, Integrin beta Chains, Proteomics, Cell Line, Tumor, HEK293 Cells, Sorting Nexins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review