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Advantages of phase retrieval for fast x-ray tomographic microscopy
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In near-field imaging with partially coherent x-rays, the phase shifting properties of the sample are encoded in the diffraction fringes that appear as an additional intensity modulation in the x-ray projection images. These Fresnel fringes are often regarded as purely an enhancement of the visibility at the interfaces. We show that retrieving the phase information contained in these patterns significantly advances the developments in fast micro-tomography. Improving temporal resolution without intensifying radiation damage implies a shortening of the exposure time rather than increasing the photon flux on the sample. Phase retrieval, to a large extent, compensates the consequent photon count moderation in the images, by fully exploiting the stronger refraction effect as compared with absorption. Two single-distance phase retrieval methods are evaluated for the case of an in situ 3 Hz micro-tomography of a rapidly evolving liquid foam, and an in vivo 6 Hz micro-tomography of a blowfly. A new dual-detector setup is introduced for simultaneous acquisition of two near-field diffraction patterns. Our goal is to couple high temporal, spatial and density resolution in a single imaging system in a dose-efficient manner, opening further options for dynamic four-dimensional studies.
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Phase contrast arises during free-space propagation of the transmitted wave field, enhancing tissue boundaries in measured images (edge enhancement).
“Phase contrast arises during the free-space propagation of the transmitted wave field, which already after short propagation distances enhances the tissue boundaries in the measured images, so-called edge enhancement 39 .”
From High-throughput phenomics of global ant biodiversity (2026) · cites this paper as [39]
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Metadata
- Authors
- Mokso, R., Marone, F., Irvine, S., Nyvlt, M., Schwyn, D., Mader, K., Taylor, G. K., Krapp, H. G., Skeren, M., & Stampanoni, M.
- Affiliations
- Paul Scherrer Institute (CH)
- University of Oxford (GB)
- Imperial College London (GB)
- University of Zurich (CH)
- Venue
- Journal of Physics D: Applied Physics
- Publisher
- IOP Publishing
- Published
- 2013-11-22
- Volume
- 46
- Issue
- 49
- Pages
- 494004
- ISSN
- 0022-3727 (ISSN-L)
- 1361-6463
- OpenAlex
- W2008161713
- Cited by
- 56
- References
- 45
- Citations by year
- 2026: 3 · 2025: 2 · 2024: 3 · 2023: 2 · 2022: 2 · 2021: 3 · 2020: 4 · 2019: 3 · 2018: 4 · 2017: 11 · 2016: 8 · 2015: 5 · 2014: 5 · 2013: 1
- FWCI
- 6.27
- Type
- journal article
- Language
- en
- Open access
- green
- doi.org
- Licence
- Locations
- Journal of Physics D Applied Physics (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion)
- DORA PSI (Paul Scherrer Institute) (submittedVersion)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion)
- Zurich Open Repository and Archive (University of Zurich)
- Topics
- Physical Sciences › Physics and Astronomy › Radiation › Advanced X-ray Imaging Techniques
- Physical Sciences › Physics and Astronomy › Atomic and Molecular Physics, and Optics › Digital Holography and Microscopy
- Physical Sciences › Materials Science › Materials Chemistry › X-ray Diffraction in Crystallography
- Keywords
- phase retrieval, X-ray tomographic microscopy, Fresnel fringes, radiation damage, exposure time reduction, refraction, liquid foams, Calliphoridae, in vivo imaging, in situ imaging, 4D imaging, temporal resolution
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