Computational approaches to therapeutic antibody design: established methods and emerging trends

Cited by (221)

Items 201–221 of 221

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3. HyperBind2: Multi-Shot Learning Enables Progressive Improvement in Computational Antibody Discovery
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4. ImmunoAI: Accelerated Antibody Discovery Using Gradient-Boosted Machine Learning with Thermodynamic-Hydrodynamic Descriptors and 3D Geometric Interface Topology
   Sukirth Shivakumar, Matthew Sandora · 2025 · International Conference on Electrical, Computer, Communications and Mechatronics Engineering (ICECCME)
5. Going Deep: The Power of Deep Learning to Uncover Disease-Driven Protein–Protein Interactions and Accelerate Drug Design
   Cristina Correia, Choong Yong Ung, Caleb M. Grenko, Shizhen Zhu, Daniel D. Billadeau, Hu Li · 2026 · Challenges and advances in computational chemistry and physics
6. Sustainable Therapeutic Strategies for Controlling Amyloid Aggregation Process
   Ayan Bera, Pooja Ghosh, Barun Das · 2026 · Innovation of Chemistry & Materials for Sustainability
7. AbDist: a lightweight, distance-based model for antibody affinity prediction as an interpretable benchmark for machine learning models
   Marc Hoffstedt, Jannis Wowra, Hermann Wätzig, Knut Baumann · 2026 · mAbs
8. Molecular Modeling and Artificial Intelligence for Computational Protein Design : conception of optimized enzymes and nanobodies
   Jelena Vučinić · 2021 · theses.fr (ABES)
9. AI-Driven BCR Modeling for Precision Immunology
   Tao Liu, Xusheng Zhao, Fan Yang · 2026 · International Journal of Molecular Sciences
10. Sequence-dominant protein therapeutics: mechanistic foundations for efficient biologics development
    Sarfaraz K. Niazi · 2026 · Frontiers in Drug Discovery
11. Prediction of Protein Antigen Epitopes from Monoclonal Antibodies by In Silico Molecular Docking
    Tânia Maria Manieri, Gabriela Massaro Barreiros · 2026 · Methods in molecular biology
12. Benchmarking Boltz-2 for Screening of Therapeutic Antibody-Antigen Interactions
    Alexandra Fieux-Castagnet, Julian Waton, Alina Glukhonemykh, Eric Snow, Roshini Ashokkumar, Jess Fleming, David Champagne, Thomas Devenyns, Alex Peluffo, Christoforos Anagnostopoulos · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
13. Strict OOD Antigen-to-Antibody Retrieval with CDR-Aware Slot Late Interaction
    Pi Liu, Mianzhi Pan, Chenyang Yan, Feng Li, Jianbing Zhang · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
14. Generative Artificial Intelligence for de novo Antibody Design and Agentic Evaluation
    Delower Hossain, Fuad Al Abir, Jake Y. Chen · 2026 · ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB)
15. A Multi-Model Strategy for Optimizing Hepatitis B Virus preS1 Epitope Recognition by the Antibody HzKR127
    陈文青, Yuanzhong Tu, Kai Wang, Runze Xie, Pengyuan Yang, Yanan Gao, Wenxiang Huang · 2026 · Current Issues in Molecular Biology
16. Exploring antibody–antigen binding affinity using degree-based topological indices: a graph-theoretical approach
    Flemin Sajeev, Roy S · 2026 · Frontiers in Chemistry
17. A surrogate-assisted multi-objective optimization algorithm for antibody design with multi-source datasets
    Ziyang Shi, Xinyi Xu, Haotian Zhang, Shenghan Ren, Handing Wang · 2026 · Swarm and Evolutionary Computation
18. Molecular recognition elements for food safety biosensing: Advances, challenges, and perspectives
    Hongfei Yang, Xingyu Wang, Menghan Wang, Linwei Zhang, Shixiang Wu, Mingyue Ding, Hao Wen, Youyi Wang, Xuan Yi, Jie Chen et al. · 2026 · Trends in Food Science & Technology
19. Nanobody engineering for next-generation therapeutics
    Tanuj Handa, Vidushi Agarwal, Rajesh Kumar, Jitin Singla, Shailly Tomar · 2026 · Elsevier eBooks
20. BindingDB Entry 50016294: New Aβ(1-42) ligands from anti-amyloid antibodies: Design, synthesis, and structural interaction.
    BindingDB · 2023 · UC San Diego
21. Integrating computational and experimental approaches to identify antigen–specific antibodies
    Maria Francesca Abbate, Paul Pereira, Pierre Toxe, Nicolas Maestrali, Marie Gagnaire, Emmanuelle Vigne, Melody A. Shahsavarian, Thierry Mora, Aleksandra M. Walczak · 2026 · Frontiers in Immunology