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TopDraw: a sketchpad for protein structure topology cartoons
Open accessAbstract
Summary: Protein topology cartoons are a representation of structural data commonly used by structural biologists to illustrate the relationship between one-dimensional sequence and three-dimensional structural data in a convenient two-dimensional format. TopDraw is a simple, freely available TCL/Tk based drawing program designed specifically for the production of publication quality topology cartoons in a style commonly presented by structural biologists. Availability: TopDraw is freely available under the terms of the GNU General Public License. It can be downloaded from http://stein.bioch.dundee.ac.uk/~charlie/scripts/topdraw.html. Contact: C.S.Bond@dundee.ac.uk
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Cited by
Structural studies on 2-oxoglutarate oxygenases and related double-stranded β-helix fold proteins
Clifton, I. J., McDonough, M. A., Ehrismann, D., Kershaw, N. J., Granatino, N., & Schofield, C. J. (2006) · Journal of Inorganic Biochemistry · doi:10.1016/j.jinorgbio.2006.01.024 · Cited by 441
Crystal Structure and Binding Properties of the Serratia marcescens Chitin-binding Protein CBP21
Vaaje-Kolstad, G., Houston, D. R., Riemen, A. H. K., Eijsink, V. G. H., & van Aalten, D. M. F. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m407175200 · Cited by 314
BslA is a self-assembling bacterial hydrophobin that coats the Bacillus subtilis biofilm
Hobley, L., Ostrowski, A., Rao, F. V., Bromley, K. M., Porter, M., Prescott, A. R., MacPhee, C. E., van Aalten, D. M. F., & Stanley-Wall, N. R. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1306390110 · Cited by 294
Blair, D. E., Schüttelkopf, A. W., MacRae, J. I., & van Aalten, D. M. F. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504339102 · Cited by 230
Eckhard, U., Huesgen, P. F., Schilling, O., Bellac, C. L., Butler, G. S., Cox, J. H., Dufour, A., Goebeler, V., Kappelhoff, R., Keller, U. A. D., et al. (2016) · Matrix Biology · doi:10.1016/j.matbio.2015.09.003 · Cited by 212
Metadata
- Authors
- Bond, C. S.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2003-01-22
- Volume
- 19
- Issue
- 2
- Pages
- 311-312
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2134794636
- Cited by
- 259
- References
- 0
- FWCI
- 4.72
- Type
- journal article
- Language
- en
- Open access
- bronze
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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
