The DOI matches its Crossref record.
GeneMerge—post-genomic analysis, data mining, and hypothesis testing
Abstract
Summary: GeneMerge is a web-based and standalone program written in PERL that returns a range of functional and genomic data for a given set of study genes and provides statistical rank scores for over-representation of particular functions or categories in the data set. Functional or categorical data of all kinds can be analyzed with GeneMerge, facilitating regulatory and metabolic pathway analysis, tests of population genetic hypotheses, cross-experiment comparisons, and tests of chromosomal clustering, among others. GeneMerge can perform analyses on a wide variety of genomic data quickly and easily and facilitates both data mining and hypothesis testing. Availability: GeneMerge is available free of charge for academic use over the web and for download from: http://www.oeb.harvard.edu/hartl/lab/publications/GeneMerge.html. Contact: ccastillo-davis@oeb.harvard.edu Supplementary information: http://www.oeb.harvard.edu/hartl/lab/publications/GeneMerge.html * To whom correspondence should be addressed.
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Cited by
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Boyle, E. I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J. M., & Sherlock, G. (2004) · Bioinformatics · doi:10.1093/bioinformatics/bth456 · Cited by 2,067
Gupta, S., Ellis, S. E., Ashar, F. N., Moes, A., Bader, J. S., Zhan, J., West, A. B., & Arking, D. E. (2014) · Nature Communications · doi:10.1038/ncomms6748 · Cited by 504
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Genome scan for cis-regulatory DNA motifs associated with social behavior in honey bees
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Hogan, A. M., Rahman, A. S. M. Z., Motnenko, A., Natarajan, A., Maydaniuk, D. T., León, B., Batun, Z., Palacios, A., Bosch, A., & Cardona, S. T. (2023) · Nature Communications · doi:10.1038/s41467-023-40494-5 · Cited by 16
Metadata
- Authors
- Castillo-Davis, C. I., & Hartl, D. L.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2003-05-01
- Volume
- 19
- Issue
- 7
- Pages
- 891-892
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2107268689
- Cited by
- 300
- References
- 0
- FWCI
- 5.79
- Type
- journal article
- Language
- en
- Open access
- closed
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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