The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
PDZBase: a protein–protein interaction database for PDZ-domains
Open accessAbstract
Summary: PDZBase is a database that aims to contain all known PDZ-domain-mediated protein–protein interactions. Currently, PDZBase contains approximately 300 such interactions, which have been manually extracted from >200 articles. The database can be queried through both sequence motif and keyword-based searches, and the sequences of interacting proteins can be visually inspected through alignments (for the comparison of several interactions), or as residue-based diagrams including schematic secondary structure information (for individual complexes). Availability: http://icb.med.cornell.edu/services/pdz/start. Contact: pdzbase@med.cornell.edu.
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Citations
Cites
Recognition of Unique Carboxyl-Terminal Motifs by Distinct PDZ Domains
Songyang, Z., Fanning, A. S., Fu, C., Xu, J., Marfatia, S. M., Chishti, A. H., Crompton, A., Chan, A. C., Anderson, J. M., & Cantley, L. C. (1997) · Science · doi:10.1126/science.275.5296.73 · Cited by 1,385
Cited by
Cordeddu, V., Di Schiavi, E., Pennacchio, L. A., Ma'ayan, A., Sarkozy, A., Fodale, V., Cecchetti, S., Cardinale, A., Martin, J., Schackwitz, W., et al. (2009) · Nature Genetics · doi:10.1038/ng.425 · Cited by 419
Graphical Models of Residue Coupling in Protein Families
Thomas, J., Ramakrishnan, N., & Bailey-Kellogg, C. (2008) · IEEE/ACM Transactions on Computational Biology and Bioinformatics · doi:10.1109/tcbb.2007.70225 · Cited by 77
Metadata
- Authors
- Beuming, T., Skrabanek, L., Niv, M. Y., Mukherjee, P., & Weinstein, H.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2004-10-28
- Volume
- 21
- Issue
- 6
- Pages
- 827-828
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2133167066
- Cited by
- 190
- References
- 1
- FWCI
- 1.97
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Beuming, T., Skrabanek, L., Niv, M. Y., Mukherjee, P., & Weinstein, H. (2005). PDZBase: a protein–protein interaction database for PDZ-domains. Bioinformatics. https://doi.org/10.1093/bioinformatics/bti098
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