Paircoil2: improved prediction of coiled coils from sequence.

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302

The Protein Data Bank

Berman, H. M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.235 · Cited by 40,196

Predicting coiled coils from protein sequences.

Lupas, A., Van Dyke, M., & Stock, J. (1991) · Science · doi:10.1126/science.252.5009.1162 · Cited by 3,953

Core Structure of gp41 from the HIV Envelope Glycoprotein

Chan, D. C., Fass, D., Berger, J. M., & Kim, P. S. (1997) · Cell · doi:10.1016/s0092-8674(00)80205-6 · Cited by 2,000

Enlarged representative set of protein structures

Hobohm, U., & Sander, C. (1994) · Protein Science · doi:10.1002/pro.5560030317 · Cited by 788

Complete atomic model of the bacterial flagellar filament by electron cryomicroscopy

Yonekura, K., Maki-Yonekura, S., & Namba, K. (2003) · Nature · doi:10.1038/nature01830 · Cited by 749

MultiCoil: A program for predicting two‐and three‐stranded coiled coils

Wolf, E., Kim, P. S., & Berger, B. (1997) · Protein Science · doi:10.1002/pro.5560060606 · Cited by 720

Predicting coiled coils by use of pairwise residue correlations.

Berger, B., Wilson, D. B., Wolf, E., Tonchev, T., Milla, M. E., & Kim, P. S. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.18.8259 · Cited by 622

PQS: a protein quaternary structure file server

Henrick, K. (1998) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(98)01253-5 · Cited by 540

Tolerating some redundancy significantly speeds up clustering of large protein databases

Li, W.-Z., Jaroszewski, L., & Godzik, A. (2002) · Bioinform. · doi:10.1093/bioinformatics/18.1.77 · Cited by 517

Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) is predicted to interact with its partner through an ARM-type α-helical structure

Chen, Y., Murakami, Y., Ahmad, S., Yoshimaru, T., Katagiri, T., & Mizuguchi, K. (2014) · BMC Research Notes · doi:10.1186/1756-0500-7-435 · Cited by 9

Acentrosomal spindle assembly and maintenance in Caenorhabditis elegans oocytes requires a kinesin-12 nonmotor microtubule interaction domain

Wolff, I. D., Hollis, J. A., & Wignall, S. M. (2022) · Molecular Biology of the Cell · doi:10.1091/mbc.e22-05-0153 · Cited by 8

Computational modeling suggests dimerization of equine infectious anemia virus Rev is required for RNA binding

Umunnakwe, C. N., Loyd, H., Cornick, K., Chavez, J. R., Dobbs, D. L., & Carpenter, S. L. (2014) · Retrovirology · doi:10.1186/s12977-014-0115-7 · Cited by 8

Protein Structure Prediction

Chakraborty, H. J., Gangopadhyay, A., Ganguli, S., & Datta, A. (2017) · Advances in bioinformatics and biomedical engineering book series · doi:10.4018/978-1-5225-2607-0.ch003 · Cited by 8

Structural basis for the Rad6 activation by the Bre1 N-terminal domain

Shi, M., Zhao, J., Zhang, S., Huang, W., Li, M., Bai, X., Zhang, W., Zhang, K., Chen, X., & Xiang, S. (2023) · eLife · doi:10.7554/elife.84157 · Cited by 8

Characterization and inhibition of AF10‐mediated interaction

Hagen, S. H., Mattay, D., Räuber, C., Müller, K. M., & Arndt, K. M. (2014) · Journal of Peptide Science · doi:10.1002/psc.2626 · Cited by 8

CENP-K and CENP-H may form coiled-coils in the kinetochores

Qiu, S., Wang, J., Yu, C., & He, D. (2009) · Science in China Series C Life Sciences · doi:10.1007/s11427-009-0050-3 · Cited by 8

Identification of Interacting Regions within the Coiled Coil of the Escherichia coli Structural Maintenance of Chromosomes Protein MukB

Li, Y., Weitzel, C. S., Arnold, R. J., & Oakley, M. G. (2009) · Journal of Molecular Biology · doi:10.1016/j.jmb.2009.05.070 · Cited by 8

Comparative genomics and bioinformatics approaches revealed the role of CC-NBS-LRR genes under multiple stresses in passion fruit

Zia, K., Sadaqat, M., Ding, B., Fatima, K., Albekairi, N. A., Alshammari, A., & Qamar, M. T. U. (2024) · Frontiers in Genetics · doi:10.3389/fgene.2024.1358134 · Cited by 7

Structural diversity and oligomerization of bacterial ubiquitin-like proteins

Gong, M., Ye, Q., Gu, Y., Chambers, L. R., Bobkov, A. A., Arakawa, N. K., Matyszewski, M., & Corbett, K. D. (2025) · Structure · doi:10.1016/j.str.2025.03.011 · Cited by 7

Distribution of disease-causing germline mutations in coiled-coils implies an important role of their N-terminal region

Kálmán, Z. E., Mészáros, B., Gáspári, Z., & Dobson, L. (2020) · Scientific Reports · doi:10.1038/s41598-020-74354-9 · Cited by 7

Chaperone requirements for de novo folding of Saccharomyces cerevisiae septins

Hassell, D., Denney, A. S., Singer, E. R., Benson, A., Roth, A., Ceglowski, J. R., Steingesser, M. G., & McMurray, M. A. (2022) · Molecular Biology of the Cell · doi:10.1091/mbc.e22-07-0262 · Cited by 8

Inka2, a novel Pak4 inhibitor, regulates actin dynamics in neuronal development

Yamada, S., Mizukoshi, T., Tokunaga, A., & Sakakibara, S. (2022) · PLoS Genetics · doi:10.1371/journal.pgen.1010438 · Cited by 7

Bioinformatics analysis and function prediction of NBS-LRR gene family in Broussonetia papyrifera

Zhang, X., Wang, F., Yang, N., Chen, N., Hu, Y., Peng, X., & Shen, S. (2022) · Biotechnology Letters · doi:10.1007/s10529-022-03318-y · Cited by 7

Specific coiled-coil interactions contribute to a global model of the structure of the spindle pole body

Zizlsperger, N., & Keating, A. E. (2010) · Journal of Structural Biology · doi:10.1016/j.jsb.2010.01.022 · Cited by 7

Inhibition of F1‐ ATP ase from Trypanosoma brucei by its regulatory protein inhibitor Tb IF 1

Gahura, O., Panicucci, B., Váchová, H., Walker, J. E., & Zı́ková, A. (2018) · FEBS Journal · doi:10.1111/febs.14672 · Cited by 7

Structural basis for distinct quality control mechanisms of GABA B receptor during evolution

Zhang, S., Li, X., Liu, X., Zhang, X. C., Zhou, R., Zhao, H., Shen, C., Pin, J., Rondard, P., & Liu, J. (2020) · The FASEB Journal · doi:10.1096/fj.202001355rr · Cited by 7

Identification of Tpr and α-actinin-4 as two novel SLK-interacting proteins

Jaberi, A., Hooker, E., Guillemette, J., Papillon, J., Kristof, A. S., & Cybulsky, A. V. (2015) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2015.06.005 · Cited by 7

Beyond Static Tethering at Membrane Contact Sites: Structural Dynamics and Functional Implications of VAP Proteins

Kodama, T. S., Furuita, K., & Kojima, C. (2025) · Molecules · doi:10.3390/molecules30061220 · Cited by 5

Cotton RSG2 Mediates Plant Resistance against Verticillium dahliae by miR482b Regulation

Wu, P., Lu, C., Wang, B., Zhang, F., Shi, L., Xu, Y., Chen, A., Si, H., Su, J., & Wu, J. (2023) · Biology · doi:10.3390/biology12070898 · Cited by 6

A key role for centralspindlin and Ect2 in the development of multicellularity and the emergence of Metazoa

Glotzer, M. (2024) · Current Biology · doi:10.1016/j.cub.2025.05.052 · Cited by 6

Involvement of a Cluster of Basic Amino Acids in Phosphorylation-Dependent Functional Repression of the Ceramide Transport Protein CERT

Goto, A., Egawa, D., Tomishige, N., Yamaji, T., Shimasaki, K., Kumagai, K., & Hanada, K. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23158576 · Cited by 6

Karyotype evolution of the Asterids insights from the first genome sequences of the family Cornaceae

Dong, C., Wang, S., Zhang, H., Liu, J., & Li, M. (2022) · DNA Research · doi:10.1093/dnares/dsac051 · Cited by 6

Is Five Percent Too Small? Analysis of the Overlaps between Disorder, Coiled Coil and Collagen Predictions in Complete Proteomes

Gáspári, Z. (2014) · Proteomes · doi:10.3390/proteomes2010072 · Cited by 6

The Coiled-coil Structure Potential of the Laminin LCC Domain is Very Fragmented and Does Not Differentiate Between Natural and Non-detected Isoforms

Zimmerman, T., & Blanco, F. J. (2007) · Journal of Biomolecular Structure and Dynamics · doi:10.1080/07391102.2007.10507129 · Cited by 6

Structure of a truncated form of leucine zipper II of JIP3 reveals an unexpected antiparallel coiled-coil arrangement

Llinas, P., Chenon, M., Nguyen, T.-H., Moreira, C., de Régibus, A., Coquard, A., Ramos, M. J., Guérois, R., Fernandes, P. A., & Ménétrey, J. (2016) · Acta Crystallographica Section F Structural Biology Communications · doi:10.1107/s2053230x16001576 · Cited by 6

VP3 is crucial for the stability of Nora virus virions

Sadanandan, S. A., Ekström, J., Jonna, V. R., Hofer, A., & Hultmark, D. (2016) · Virus Research · doi:10.1016/j.virusres.2016.06.011 · Cited by 6

DiiA is a novel dimorphic cell wall protein of Streptococcus pneumoniae involved in invasive disease

Escolano-Martínez, M. S., Domenech, A., Yuste, J., Cercenado, M. I., Ardanuy, C., Liñares, J., de la Campa, A. G., & Martín-Galiano, A. J. (2016) · Journal of Infection · doi:10.1016/j.jinf.2016.04.010 · Cited by 6

Modeling of the potential coiled-coil structure of snapin protein and its interaction with SNARE complex

Gowthaman, R., Silvester, A. J., Saranya, K., Rathna Kanya, K. S., & Kanya, K. S. (2006) · Bioinformation · doi:10.6026/97320630001269 · Cited by 6

De-novo modeling and ESR validation of a cyanobacterial FoF1–ATP synthase subunit bb′ left-handed coiled coil

Volkov, O. A., Zaida, T. M., Völler, P., Lill, H., Wise, J. G., & Vogel, P. D. (2008) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2008.12.007 · Cited by 6

Structural rationale to understand the effect of disease-associated mutations on Myotubularin

Bhattacharyya, T., Ghosh, A., Verma, S., Raghu, P., & Sowdhamini, R. (2023) · Current Research in Structural Biology · doi:10.1016/j.crstbi.2023.100100 · Cited by 5

Crystal Structure of the Central Coiled-Coil Domain from Human Liprin-β2

Stafford, R., Tang, M.-Y., Sawaya, M. R., Phillips, M. L., & Bowie, J. U. (2011) · Biochemistry · doi:10.1021/bi200141e · Cited by 5

Mason: a JavaScript web site widget for visualizing and comparing annotated features in nucleotide or protein sequences

Jaschob, D., Davis, T. N., & Riffle, M. E. (2015) · BMC Research Notes · doi:10.1186/s13104-015-1009-z · Cited by 5

Cloning, overexpression, purification and crystallization of the CRN12 coiled-coil domain fromLeishmania donovani

Srivastava, V. K., Rana, A. K., Sahasrabuddhe, A. A., Gupta, C. M., & Pratap, J. V. (2013) · Acta Crystallographica Section F Structural Biology and Crystallization Communications · doi:10.1107/s1744309113007811 · Cited by 5

Mapping Critical Residues in ATG11’s Coiled-Coil 2 Domain that Block Multiple Interactions and Disrupt Selective Autophagy

Meyer, M. D., Winzeler, J., Taylor, S. M., Kilgore, A., Edicha, K., Chitwood, C., Spearin, Z., Silvia, S. K. N. R., Chakraborty, R., Smith, J. E., et al. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.775364 · Cited by 5

A combined in silico and in vivo approach to the structure-function annotation of SPD-2 provides mechanistic insight into its functional diversity

Murph, M. C., Singh, S. M., & Schvarzstein, M. (2022) · Cell Cycle · doi:10.1080/15384101.2022.2078458 · Cited by 5

Combinatorial use of disulfide bridges and native sulfur-SAD phasing for rapid structure determination of coiled-coils

Kraatz, S. H. W., Bianchi, S., & Steinmetz, M. O. (2018) · Bioscience Reports · doi:10.1042/bsr20181073 · Cited by 5

Protein Flexibility and Coiled-Coil Propensity: New Insights Into Type III and Other Bacterial Secretion Systems

Ntani, S., Anastasia, D., Kotzabasaki, M. I., Sarris, P. F., Vassiliki, E., Nickolas, J. P., & Kokkinidis, M. (2012) · InTech eBooks · doi:10.5772/32582 · Cited by 5

Reconstitution of an active human CENP-E motor

Craske, B., Legal, T., & Welburn, J. P. I. (2022) · Open Biology · doi:10.1098/rsob.210389 · Cited by 4

First-passage times in complex energy landscapes: a case study with nonmuscle myosin II assembly

Bebon, R., & Schwarz, U. S. (2022) · New Journal of Physics · doi:10.1088/1367-2630/ac78fd · Cited by 4

The HP0256 gene product is involved in motility and cell envelope architecture of Helicobacter pylori

Douillard, F. P., Ryan, K. A., Lane, M. C., Caly, D. L., Moore, S. A., Penn, C. W., Hinds, J., & O’Toole, P. W. (2010) · BMC Microbiology · doi:10.1186/1471-2180-10-106 · Cited by 4

Prediction of fragile points of coiled coils

Tanizawa, H., Taniguchi, M., Ghimire, G. D., & Mitaku, S. (2009) · Chem-Bio Informatics Journal · doi:10.1273/cbij.9.12 · Cited by 4

Immortal coils: Conserved dimerization motifs of the Drosophila ovulation prohormone ovulin

Wong, A., Christopher, A. B., Buehner, N. A., & Wolfner, M. F. (2010) · Insect Biochemistry and Molecular Biology · doi:10.1016/j.ibmb.2010.01.009 · Cited by 4

Predicting and validating a model of suppressor of IKKepsilon through biophysical characterization

Machek, M. L., Sonnenschein, H. A., Graham, S. I., Shikwana, F., Kim, S. L., DuBar, S. G., Minzer, I. D., Wey, R., & Bell, J. K. (2019) · Protein Science · doi:10.1002/pro.3640 · Cited by 4

RPRD Proteins Control Transcription in Human CellsPreprint

Winczura, K., Ceylan, H., Śledziowska, M., Jones, M., Fagarasan, H., Wang, J., Saponaro, M., Arnold, R. R., Hebenstreit, D., & Grzechnik, P. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.06.20.449126 · Cited by 4

Bacterial antiviral defense pathways encode eukaryotic-like ubiquitination systemsPreprint

Chambers, L. R., Ye, Q., Cai, J., Gong, M., Ledvina, H. E., Zhou, H., Whiteley, A. T., Suhandynata, R. T., & Corbett, K. D. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.26.559546 · Cited by 4

Immunocytochemical Localization of the Kinetochore Protein Nuf2p on the Gametophyte Chromosomes of a Cultivar of Saccharina (Phaeophyta)

Dong, W.-S., Liu, P., Liu, Y., Du, Y., Bi, Y., & Zhou, Z. (2020) · Frontiers in Marine Science · doi:10.3389/fmars.2020.539260 · Cited by 3

Techniques for Molecular Mechanism of Host Resistance

Saharan, G. S., Mehta, N. K., & Meena, P. D. (2021) · Springer eBooks · doi:10.1007/978-981-16-1974-8_8 · Cited by 3

CoCoNuTs are a diverse subclass of Type IV restriction systems predicted to target RNA

Bell, R. T., Sahakyan, H., Makarova, K. S., Wolf, Y. I., & Koonin, E. V. (2024) · eLife · doi:10.7554/elife.94800.3 · Cited by 3

Application of complex demodulation on bZIP and bHLH-PAS protein domains

Wang, Z., Smith, C. E., & Atchley, W. R. (2007) · Mathematical Biosciences · doi:10.1016/j.mbs.2007.01.004 · Cited by 3

A structural annotation resource for the selection of putative target proteins in the malaria parasite

Joubert, Y., & Joubert, F. (2008) · Malaria Journal · doi:10.1186/1475-2875-7-90 · Cited by 3

New Approach to Detect Coiled Coil and Leucine Zipper Motifs in Protein Sequences

Osmanković, D., Dorić, S., Pojskić, N., & Bilela, L. L. (2018) · Journal of Computational Biology · doi:10.1089/cmb.2018.0104 · Cited by 3

Inferring Protein Function from Sequence

Brutlag, D. L. (2007) · doi:10.1002/9783527619368.ch30 · Cited by 3

First Steps of Protein Structure Prediction

Majorek, K. A., Kozlowski, L. P., Jąkalski, M., & Bujnicki, J. M. (2008) · doi:10.1002/9780470741894.ch2 · Cited by 3

Conformational changes in the Escherichia coli ATP synthase b-dimer upon binding to F1-ATPase

Zaida, T. M., Hornung, T., Volkov, O. A., Hoffman, A. D., Pandey, S. J., Wise, J. G., & Vogel, P. D. (2008) · Journal of Bioenergetics and Biomembranes · doi:10.1007/s10863-008-9189-z · Cited by 3

Sequencing of Panax notoginseng genome reveals genes involved in disease resistance and ginsenoside biosynthesisPreprint

Fan, G., Fu, Y., Yang, B., Liu, M., Zhang, H., Liang, X., Shi, C., Ma, K., Wang, J., Liu, W., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/362046 · Cited by 3

AtCIPK16 Mediates Salt Stress Through Phytohormones and Transcription FactorsPreprint

Amarasinghe, S. L., Huang, W., Watson-Haigh, N. S., Gilliham, M., Roy, S. J., & Baumann, U. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.02.17.953216 · Cited by 3

C-Terminal Truncation and Fusion Partner Determine Oncogenicity of FGFR3

Yemelyanenko, J., Bhin, J., van der Burg, E., Drenth, A. P., Lee, J., Lutz, C., Dörner, L., Wientjens, E., Klarenbeek, S., Song, J., et al. (2025) · Cancer Research · doi:10.1158/0008-5472.can-24-2648 · Cited by 2

HSF1 in aging: The output selection model

Khatatneh, S., Sőti, C., & Somogyvári, M. (2026) · Mechanisms of Ageing and Development · doi:10.1016/j.mad.2026.112225 · Cited by 2

Accommodating Discontinuities in Dimeric Left-Handed Coiled Coils in ATP Synthase External Stalks

Wise, J. G., & Vogel, P. D. (2009) · Biophysical Journal · doi:10.1016/j.bpj.2008.12.3938 · Cited by 2

Development of Resistance Cultivars’ Techniques

Saharan, G. S., Mehta, N. K., & Meena, P. D. (2021) · Springer eBooks · doi:10.1007/978-981-16-0862-9_9 · Cited by 2

Improving Coiled-Coil Prediction with Evolutionary Information

Fariselli, P., Bartoli, L., & Casadio, R. (2010) · Lecture notes in computer science · doi:10.1007/978-3-642-14571-1_2 · Cited by 2

The coiled-coil domain of glycosomal membrane-associatedLeishmania donovaniPEX14: cloning, overexpression, purification and preliminary crystallographic analysis

Shakya, A. K., & Pratap, J. V. (2020) · Acta Crystallographica Section F Structural Biology Communications · doi:10.1107/s2053230x20011127 · Cited by 2

Case Report: Prenatal Recurrent Microcephaly and Corpus Callosum Abnormalities in a Chinese Family with Novel Biallelic SASS6 Mutations

Wah, Y. M. I., Cao, Y., Law, C. Y., Choy, K. W., Leung, T. Y., Kwan, A. H. W., & Poon, L. C. (2023) · Fetal Diagnosis and Therapy · doi:10.1159/000529504 · Cited by 2

Phylogeny, Expression Profiling, and Coexpression Networks Reveals the Critical Roles of Nucleotide-BindingLeucine-Rich Repeats on Valsa Canker Resistance

Cao, Y., Yu, H., Tian, D., Sun, E., Zuo, L., Jiang, D., Zuo, C., & Fan, R. (2023) · Horticulturae · doi:10.3390/horticulturae9030345 · Cited by 2

Recent Advances in Computational Prediction of Secondary and Supersecondary Structures from Protein Sequences

Zhang, J., Qian, J., Zou, Q., Zhou, F., & Kurgan, L. (2024) · Methods in molecular biology · doi:10.1007/978-1-0716-4213-9_1 · Cited by 3

Investigating the role of the mesoderm induction early response (MIER) family members as transcriptional co-repressors

Derwish, R. (2019) · Memorial University Research Repository (Memorial University) · Cited by 2

COCONUT: An analysis of coiled-coil regions in proteinsPreprint

Soni, N., & Madhusudhan, M. S. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.03.25.586698 · Cited by 2

Conservation of OFD1 Protein Motifs: Implications for Discovery of Novel Interactors and the OFD1 Function

Jagodzik, P., Ziętkiewicz, E., & Bukowy‐Bieryłło, Z. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26031167 · Cited by 1

The Structure of a NEMO Construct Engineered for Screening Reveals Novel Determinants of Inhibition

Kennedy, A. E., Barczewski, A. H., Arnoldy, C. R., Pennington, J. P., Tiernan, K. A., Hidalgo, M. B., Reilly, C. C., Wongsri, T., Ragusa, M. J., Grigoryan, G., et al. (2024) · Structure · doi:10.1016/j.str.2025.01.010 · Cited by 1

Altering the biophysical properties of ERC1/ELKS–driven condensates interferes with cell motility

Ribolla, L. M., Patrone, M., Degano, M., Ramella, M., & de Curtis, I. (2025) · Communications Biology · doi:10.1038/s42003-025-08470-5 · Cited by 1

Machine learning empowers precise discovery of disease-resistance genes in plants

Liu, Z., Wang, X., Cao, S., Lei, T., Chen, Z., Zhang, M., Liu, Z., Li, J. M., Lu, J., Ma, W., et al. (2026) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiag276 · Cited by 1

Identification and characterization of coiled-coil motifs across Autographa californica multiple nucleopolyhedrovirus genome

Qiu, J., Liu, Z., Fang, Z., & Wu, W. (2022) · Heliyon · doi:10.1016/j.heliyon.2022.e10588 · Cited by 1

Cornelia de Lange Syndrome mutations in SMC1A cause cohesion defects in yeast

Chen, J., Floyd, E. N., Dawson, D., & Rankin, S. (2023) · Genetics · doi:10.1093/genetics/iyad159 · Cited by 1

Biophysical characterization of the dystrophin C-terminal domain: Dystrophin interacts differentially with dystrobrevin isoforms

Upadhyay, V., Ray, S., Panja, S., Saviola, A. J., Maluf, N. K., & Mallela, K. M. G. (2024) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2024.108002 · Cited by 1

Discovery and analysis of NBS-LRR gene family in sweet potato genome

Huang, X., Bi, C., Shi, Y., Hu, Y., Li-Xiang, Z. H. O. U., LIANG, C.-X., Huang, B., Xu, M. Q., Lin, S., & Chen, X. (2020) · ACTA AGRONOMICA SINICA · doi:10.3724/sp.j.1006.2020.94163 · Cited by 1

Investigation of coiled-coil interactions between proteins of the spindle pole body

Zizlsperger, N. (2010) · DSpace@MIT (Massachusetts Institute of Technology) · Cited by 1

Protein function prediction in genomes: Critical assessment of coiled-coil predictions based on protein structure dataPreprint

Simm, D., Hatje, K., Waack, S., & Kollmar, M. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/675025 · Cited by 1

CoCoNuTs: A diverse subclass of Type IV restriction systems predicted to target RNA

Bell, R. T., Sahakyan, H., Makarova, K. S., Wolf, Y. I., & Koonin, E. V. (2023) · doi:10.1101/2023.07.31.551357 · Cited by 1

A suppressor screen in C. elegans identifies a multi-protein interaction interface that stabilizes the synaptonemal complexPreprint

Kursel, L. E., Martinez, J. E. A., & Rog, O. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.21.554166 · Cited by 1

Phylogenetic analysis of Centralspindlin and Ect2 provides mechanistic insights into the emergence of Metazoa and multicellularityPreprint

Glotzer, M. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.16.607330 · Cited by 1

Molecular background of three lethal fetal syndromes

Nousiainen, H. O. (2011) · STM:n Hallinnonalan avoin julkaisuarkisto (Julkari)

Identification of novel protein scaffolds for small molecules binding and for catalysis

Luisi, I. (2012) · OpenstarTs (Univeristy of Trieste https://www.units.it/)

Engineering of coiled-coil protein scaffolds as innovative tools for biosensing applications

Gaiotto, T. (2009) · OpenstarTs (Univeristy of Trieste https://www.units.it/)

Structural analysis of inter-genus complexes of V-antigen and its regulator and their stabilization by divalent metal ions

Basu, A., Das, A., Mondal, A., & Datta, S. (2015) · European Biophysics Journal · doi:10.1007/s00249-015-1081-2

动粒蛋白CENP-K和CENP-H可形成异源超螺旋复合体

邱淑兰, 王佳宁, 于闯, & 何大澄 (2009) · Science in China Series C-Life Sciences (in Chinese) · doi:10.1360/zc2009-39-2-202

Computational methods for the analysis of protein structure and function

Bartoli, L. (2009) · AMS Dottorato Institutional Doctoral Theses Repository (University of Bologna) · doi:10.6092/unibo/amsdottorato/1225

Multicoil-HMM : improved prediction of coiled-coil oligomer state from sequence

Trigg, J. (2010)

Biology of a small RNA virus that infects Drosophila melanogaster

Sadanandan, S. A. (2016) · DiVA at Umeå University (Umeå University)

Characterization of physicochemical environments of proteins

Tan, K. P. (2017) · doi:10.32657/10356/69607

Examination of the Transcriptional Regulation and Downstream Targets of the Transcription Factor AtMYB61

Prouse, M. B. (2014) · TSpace (University of Toronto)

Distinct Nuclear-Cytoskeletal LINCages Position the Nucleus for Homeostasis, Polarization and Migration

Zhu, R. (2017) · doi:10.7916/d8k64wmq

Cornelia de Lange Syndrome-associated mutations in Smc1 cause both sister chromatid cohesion and cohesion-independent defectsPreprint

Chen, J., Wu, F. M., Dawson, D., & Rankin, S. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/263418

Alopecia areata susceptibility variant identified by MHC risk haplotype sequencing reproduces symptomatic patched hair loss in micePreprint

Oka, A., Takagi, A., Komiyama, E., Mano, S., Hosomichi, K., Suzuki, S., Motosugi, N., Hatanaka, T., Kimura, M., Ueda, M. T., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/308197

Activation and Inhibition of Lys63-linked Polyubiquitination via Ubc13 modulation

Hodge, C. D. (2015) · ERA: Education and Research Archive (University of Alberta) · doi:10.7939/r3tm72c1d

Regulation of Lipoprotein Lipase Activity : an In-vitro Study of a Complex and Dynamic System

Kovrov, O. (2019) · KTH Publication Database DiVA (KTH Royal Institute of Technology)

APRANK: computational prioritization of antigenic proteins and peptides from complete pathogen proteomesPreprint

Ricci, A. D., Brunner, M., Ramoa, D., Carmona, S. J., Nielsen, M., & Agüero, F. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.04.27.441630

The Myosin II Coiled-Coil Domain Atomic Structure in its Native Environment

Rahmani, H., Ma, W., Hu, Z., Daneshparvar, N., Taylor, D. W., McCammon, J. A., Irving, T. C., Edwards, R. J., & Taylor, K. A. (2021) · Microscopy and Microanalysis · doi:10.1017/s1431927621003299

TRP Channels in Vision

(2017) · Frontiers in neuroscience · doi:10.1201/9781315152837-4

New approaches and software for sequence function prediction and gene design integrating specific knowledge on protein structure and translation

Simm, D. (2022) · eDiss (Georg-August-Universität Göttingen) · doi:10.53846/goediss-9118

Predicting coiled coils by use of pairwise residue correlations.

Berger, B., Wilson, D. B., Wolf, E., Tonchev, T., Milla, M. E., & Kim, P. S. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.18.8259 · Cited by 622

PS-Coils: A new method for coiled-coil prediction that expolits both single sequence and evolutionary information

Bartoli, L., Fariselli, P., & Casadio, R. (2009) · Archivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna)

Comparative analysis of coiled-coil prediction methods

Gruber, M., Söding, J., & Lupas, A. N. (2006) · Journal of Structural Biology · doi:10.1016/j.jsb.2006.03.009 · Cited by 161

Critical assessment of coiled-coil predictions based on protein structure data

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Protein function prediction in genomes: Critical assessment of coiled-coil predictions based on protein structure dataPreprint

Simm, D., Hatje, K., Waack, S., & Kollmar, M. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/675025 · Cited by 1