Moderated statistical tests for assessing differences in tag abundance
Robinson, Mark D., Smyth, Gordon K.·2007·Bioinformatics
Cited by (869)
Items 801–869 of 869
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- Additional file 7 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 1 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 3 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 9 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 5 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 2 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 6 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 8 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- Additional file 4 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Shuangxia Jin, Fuguang Li, Zhi Wang · 2022 · Figshare
- SIEVEseq: One-stop differential expression, variability, and skewness analyses using RNA-Seq dataHongxiang Li, Tsung Fei Khang · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
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- Dissection of the microRNA transcriptomes of CD4 + T cell subsets in autoimmune inflammation identifies novel regulators of disease pathogenesisCarolina Cunha, Paula Vargas Romero, Daniel Inácio, Ana Teresa Pais, Catarina Pelicano, Marina C. Costa, Sofia Mensurado, Nuno Sousa, Pedro Henrique Papotto, Daniel Neves et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Finite mixtures of multivariate Poisson-log normal factor analyzers for clustering count dataAndrea Payne, Anjali Silva, Steven J. Rothstein, Paul D. McNicholas, Sanjeena Dang Subedi · 2025 · Statistics and Computing
- Widespread male–female expression imbalance of X-linked genes across phrynosomatid lizardsMatthew D. Hale, Pietro L. H. de Mello, Daniel Nondorf, Christopher D. Robinson, Henry B. John‐Alder, Christian L. Cox, Robert M. Cox · 2026 · Molecular Biology and Evolution
- A transcriptional plasticity-aware framework for RNA-seq differential expression analysisCheng Bei, Xiaoman Wang, Mingyu Gan, Howard Eugene Takiff, Eric J. Rubin, Junhao Zhu, Qian Gao, Qingyun Liu · 2025 · Briefings in Bioinformatics
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- The Length of Lactation and Model of Weaning Modulate Key Regulatory Nodes of Murine Mammary Gland InvolutionSonia Puebla, Amparo Gimeno, Elena Ortiz Zapater, Rosa Zaragozá, Juan R. Viña, Elena R. García–Trevijano · 2025 · International Journal of Molecular Sciences
- Distinct cellular and transcriptional mechanisms mediate an antioxidant therapeutic response in 22q11-deleted upper layer cortical projection neuronsShah Rukh, Daniel W. Meechan, Abra Roberts, Connor Siggins, Zachary D. Erwin, Thomas Michael Maynard, Anthony‐Samuel LaMantia · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
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- Additional file 10 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Jin, Shuangxia, Li, Fuguang, Zhi Wang · 2022 · Figshare
- Additional file 2 of Novel artificial nerve transplantation of human iPSC-derived neurite bundles enhanced nerve regeneration after peripheral nerve injuryTakayuki Nishijima, Kentaro Okuyama, Shibata, Shinsuke, Hiroo Kimura, Shinozaki, Munehisa, Takehito Ouchi, ヨウ マブチ, Ohno, Tatsukuni, Junpei Nakayama, Manabu Hayatsu et al. · 2024 · Figshare
- Additional file 2 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 4 of Identification of circulating miRNAs differentially expressed in patients with Limb-girdle, Duchenne or facioscapulohumeral muscular dystrophiesGarcía-Giménez, José Luis, Elena R. García–Trevijano, Ana Isabel Avilés‐Alía, José Santiago Ibáñez-Cabellos, Bovea-Marco, Miquel, Bas, Teresa, Federico Vicente Pallardó, Juan R. Vinã, Rosa Zaragozá · 2023 · Figshare
- Additional file 2 of FUS-ALS hiPSC-derived astrocytes impair human motor units through both gain-of-toxicity and loss-of-support mechanismsKatarina Stoklund Dittlau, Lisanne Terrie, Pieter Baatsen, Axelle Kerstens, Lim De Swert, Rekin’s Janky, Nikky Corthout, Pegah Masrori, Philip Van Damme, P. Hyttel et al. · 2024 · Figshare
- Additional file 1 of Identification of circulating miRNAs differentially expressed in patients with Limb-girdle, Duchenne or facioscapulohumeral muscular dystrophiesGarcía-Giménez, José Luis, Elena R. García–Trevijano, Ana Isabel Avilés‐Alía, José Santiago Ibáñez-Cabellos, Bovea-Marco, Miquel, Bas, Teresa, Federico Vicente Pallardó, Juan R. Vinã, Rosa Zaragozá · 2023 · Figshare
- Additional file 3 of Identification of circulating miRNAs differentially expressed in patients with Limb-girdle, Duchenne or facioscapulohumeral muscular dystrophiesGarcía-Giménez, José Luis, Elena R. García–Trevijano, Ana Isabel Avilés‐Alía, José Santiago Ibáñez-Cabellos, Bovea-Marco, Miquel, Bas, Teresa, Federico Vicente Pallardó, Juan R. Vinã, Rosa Zaragozá · 2023 · Figshare
- Additional file 2 of Identification of circulating miRNAs differentially expressed in patients with Limb-girdle, Duchenne or facioscapulohumeral muscular dystrophiesGarcía-Giménez, José Luis, Elena R. García–Trevijano, Ana Isabel Avilés‐Alía, José Santiago Ibáñez-Cabellos, Bovea-Marco, Miquel, Bas, Teresa, Federico Vicente Pallardó, Juan R. Vinã, Rosa Zaragozá · 2023 · Figshare
- Additional file 13 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Jin, Shuangxia, Li, Fuguang, Zhi Wang · 2022 · Figshare
- Additional file 3 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 11 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Jin, Shuangxia, Li, Fuguang, Zhi Wang · 2022 · Figshare
- Additional file 1 of Single cell transcriptome atlas of mouse mammary epithelial cells across developmentBhupinder Pal, Yunshun Chen, Michael J. G. Milevskiy, François Vaillant, Lexie Prokopuk, Caleb A. Dawson, Bianca D. Capaldo, Song, Xiaoyu, Felicity C. Jackling, Timpson, Paul et al. · 2021 · Figshare
- Additional file 9 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 1 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 1 of FUS-ALS hiPSC-derived astrocytes impair human motor units through both gain-of-toxicity and loss-of-support mechanismsKatarina Stoklund Dittlau, Lisanne Terrie, Pieter Baatsen, Axelle Kerstens, Lim De Swert, Rekin’s Janky, Nikky Corthout, Pegah Masrori, Philip Van Damme, P. Hyttel et al. · 2024 · Figshare
- Additional file 1 of Negative binomial additive model for RNA-Seq data analysisRen, Xu, Kuan, Pei-Fen · 2020 · Figshare
- Additional file 1 of CoCoA-diff: counterfactual inference for single-cell gene expression analysisYongjin Park, M Kellis · 2021 · Figshare
- Additional file 12 of RNA-Seq with a novel glabrous-ZM24fl reveals some key lncRNAs and the associated targets in fiber initiation of cottonXianyan Zou, Faiza Ali, Jin, Shuangxia, Li, Fuguang, Zhi Wang · 2022 · Figshare
- Additional file 1 of Novel artificial nerve transplantation of human iPSC-derived neurite bundles enhanced nerve regeneration after peripheral nerve injuryTakayuki Nishijima, Kentaro Okuyama, Shibata, Shinsuke, Hiroo Kimura, Shinozaki, Munehisa, Takehito Ouchi, ヨウ マブチ, Ohno, Tatsukuni, Junpei Nakayama, Manabu Hayatsu et al. · 2024 · Figshare
- Additional file 7 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 8 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 5 of Novel artificial nerve transplantation of human iPSC-derived neurite bundles enhanced nerve regeneration after peripheral nerve injuryTakayuki Nishijima, Kentaro Okuyama, Shibata, Shinsuke, Hiroo Kimura, Shinozaki, Munehisa, Takehito Ouchi, ヨウ マブチ, Ohno, Tatsukuni, Junpei Nakayama, Manabu Hayatsu et al. · 2024 · Figshare
- Additional file 4 of Novel artificial nerve transplantation of human iPSC-derived neurite bundles enhanced nerve regeneration after peripheral nerve injuryTakayuki Nishijima, Kentaro Okuyama, Shibata, Shinsuke, Hiroo Kimura, Shinozaki, Munehisa, Takehito Ouchi, ヨウ マブチ, Ohno, Tatsukuni, Junpei Nakayama, Manabu Hayatsu et al. · 2024 · Figshare
- Additional file 6 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 3 of Novel artificial nerve transplantation of human iPSC-derived neurite bundles enhanced nerve regeneration after peripheral nerve injuryTakayuki Nishijima, Kentaro Okuyama, Shibata, Shinsuke, Hiroo Kimura, Shinozaki, Munehisa, Takehito Ouchi, ヨウ マブチ, Ohno, Tatsukuni, Junpei Nakayama, Manabu Hayatsu et al. · 2024 · Figshare
- Additional file 1 of RnaSeqSampleSize: real data based sample size estimation for RNA sequencingZhao, Shilin, Li, Chung-I, Guo, Yan, Quanhu Sheng, Shyr, Yu · 2018 · Figshare
- Additional file 2 of CoCoA-diff: counterfactual inference for single-cell gene expression analysisYongjin Park, M Kellis · 2021 · Figshare
- Additional file 5 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Additional file 4 of Robust identification of regulatory variants (eQTLs) using a differential expression framework developed for RNA-sequencingMackenzie A. Marrella, Fernando H. Biase · 2024 · Figshare
- Study on Multi-Omics Data-Driven Prediction of Lung Cancer Stages思亲 胡 · 2026 · Hans Journal of Computational Biology
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- An antioxidant therapy elicits distinct transcriptome responses in 22q11-deleted upper layer cortical projection neuronsShah Rukh, Daniel W. Meechan, Abra Roberts, Connor Siggins, Zachary D. Erwin, Thomas Michael Maynard, Anthony‐Samuel LaMantia · 2026 · Disease Models & Mechanisms
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- SIEVEseq: unified differential expression, variability, and skewness analyses using RNA-Seq dataHongxiang Li, Tsung Fei Khang · 2026 · DNA Research
- A microRNA atlas of CD4+ T cell subsets in experimental autoimmune encephalomyelitis identifies regulators of disease pathogenesisCarolina Cunha, Daniel Inácio, Paula Vargas Romero, Ana Teresa Pais, Catarina Pelicano, Marina Costa, Sofia Mensurado, Natacha Gonçalves‐Sousa, Pedro Henrique Papotto, D Neves et al. · 2026 · PLoS Biology
- Classification and Multiple Hypothesis Testing in Microarray and RNA-Seq ExperimentsPatrick Harrington · 2015 · OpenCommons at University of Connecticut (University of Connecticut)