The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
DSigDB: drug signatures database for gene set analysis
Open accessAbstract
Summary: We report the creation of Drug Signatures Database (DSigDB), a new gene set resource that relates drugs/compounds and their target genes, for gene set enrichment analysis (GSEA). DSigDB currently holds 22 527 gene sets, consists of 17 389 unique compounds covering 19 531 genes. We also developed an online DSigDB resource that allows users to search, view and download drugs/compounds and gene sets. DSigDB gene sets provide seamless integration to GSEA software for linking gene expressions with drugs/compounds for drug repurposing and translational research. Availability and implementation: DSigDB is freely available for non-commercial use at http://tanlab.ucdenver.edu/DSigDB. Supplementary information: Supplementary data are available at Bioinformatics online. Contact: aikchoon.tan@ucdenver.edu
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Molecular signatures database (MSigDB) 3.0
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Cited by
Proteogenomic characterization of pancreatic ductal adenocarcinoma
Cao, L., Huang, C., Cui Zhou, D., Hu, Y., Lih, T. M., Savage, S. R., Krug, K., Clark, D. J., Schnaubelt, M., Chen, L., et al. (2021) · Cell · doi:10.1016/j.cell.2021.08.023 · Cited by 578
Drug repurposing from the perspective of pharmaceutical companies
Cha, Y., Erez, T., Reynolds, I. J., Kumar, D., Ross, J., Koytiger, G., Kusko, R., Zeskind, B., Risso, S., Kagan, E., et al. (2018) · British Journal of Pharmacology · doi:10.1111/bph.13798 · Cited by 429
HumanNet v2: human gene networks for disease research
Hwang, S., Kim, C. Y., Yang, S., Kim, E., Hart, T., Marcotte, E. M., & Lee, I. (2019) · Nucleic Acids Research · doi:10.1093/nar/gky1126 · Cited by 210
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Drug databases and their contributions to drug repurposing
Masoudi-Sobhanzadeh, Y., Omidi, Y., Amanlou, M., & Masoudi-Nejad, A. (2020) · Genomics · doi:10.1016/j.ygeno.2019.06.021 · Cited by 131
Metadata
- Authors
- Yoo, M., Shin, J., Kim, J., Ryall, K. A., Lee, K., Lee, S., Jeon, M., Kang, J., & Tan, A. C.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2015-05-19
- Volume
- 31
- Issue
- 18
- Pages
- 3069-3071
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2142879323
- Cited by
- 750
- References
- 3
- FWCI
- 5.02
- Type
- journal article
- Language
- en
- Open access
- bronze
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