The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
ggseqlogo: a versatile R package for drawing sequence logos
Abstract
Summary: Sequence logos have become a crucial visualization method for studying underlying sequence patterns in the genome. Despite this, there remains a scarcity of software packages that provide the versatility often required for such visualizations. ggseqlogo is an R package built on the ggplot2 package that aims to address this issue. ggseqlogo offers native illustration of publication-ready DNA, RNA and protein sequence logos in a highly customizable fashion with features including multi-logo plots, qualitative and quantitative colour schemes, annotation of logos and integration with other plots. The package is intuitive to use and seamlessly integrates into R analysis pipelines. Availability and implementation: ggseqlogo is released under the GNU licence and is freely available via CRAN-The Comprehensive R Archive Network https://cran.r-project.org/web/packages/ggseqlogo. A detailed tutorial can be found at https://omarwagih.github.io/ggseqlogo.
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ggplot2: Elegant Graphics for Data Analysis
Wickham, H. (2009) · doi:10.1007/978-0-387-98141-3 · Cited by 14,447
The Genetics of Transcription Factor DNA Binding Variation
Deplancke, B., Alpern, D., & Gardeux, V. (2016) · Cell · doi:10.1016/j.cell.2016.07.012 · Cited by 390
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Metadata
- Authors
- Wagih, O.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2017-07-20
- Volume
- 33
- Issue
- 22
- Pages
- 3645-3647
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2737196618
- Cited by
- 929
- References
- 2
- FWCI
- 17.86
- Type
- journal article
- Language
- en
- Open access
- closed
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