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Advanced intercross lines, an experimental population for fine genetic mapping.
Open accessAbstract
An advanced intercrossed line (AIL) is an experimental population that can provide more accurate estimates of quantitative trait loci (QTL) map location than conventional mapping populations. An AIL is produced by randomly and sequentially intercrossing a population that initially originated from a cross between two inbred lines or some variant thereof. This provides increasing probability of recombination between any two loci. Consequently, the genetic length of the entire genome is stretched, providing increased mapping resolution. In this way, for example, with the same population size and QTL effect, a 95% confidence interval of QTL map location of 20 cM in the F2 is reduced fivefold after eight additional random mating generations (F10). Simulation results showed that to obtain the anticipated reduction in the confidence interval, breeding population size of the AIL in all generations should comprise an effective number of > or = 100 individuals. It is proposed that AILs derived from crosses between known inbred lines may be a useful resource for fine genetic mapping.
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Cites
Precision mapping of quantitative trait loci.
Zeng, Z. B. (1994) · Genetics · doi:10.1093/genetics/136.4.1457 · Cited by 3,182
Haley, C. S., & Knott, S. A. (1992) · Heredity · doi:10.1038/hdy.1992.131 · Cited by 1,991
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Benson, A. K., Kelly, S. A., Legge, R., Ma, F., Low, S. J., Kim, J., Zhang, M., Oh, P. L., Nehrenberg, D., Hua, K., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1007028107 · Cited by 1,314
The Genetic Architecture of Quantitative Traits
Mackay, T. F. C. (2001) · Annual Review of Genetics · doi:10.1146/annurev.genet.35.102401.090633 · Cited by 1,106
QGENE: software for marker-based genomic analysis and breeding
Nelson, J. C. (1997) · Molecular Breeding · doi:10.1023/a:1009604312050 · Cited by 593
A method for fine mapping quantitative trait loci in outbred animal stocks
Mott, R., Talbot, C. J., Turri, M. G., Collins, A. C., & Flint, J. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.230304397 · Cited by 441
Metadata
- Authors
- Darvasi, A., & Soller, M.
- Venue
- Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 1995-11-01
- Volume
- 141
- Issue
- 3
- Pages
- 1199-1207
- ISSN
- 0016-6731 (ISSN-L)
- 1943-2631
- OpenAlex
- W2126810330
- Cited by
- 579
- References
- 2
- FWCI
- 6.69
- Type
- journal article
- Language
- en
- Open access
- bronze
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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
