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A Detailed Linkage Map of Medaka, Oryzias latipes: Comparative Genomics and Genome Evolution
Abstract
We mapped 633 markers (488 AFLPs, 28 RAPDs, 34 IRSs, 75 ESTs, 4 STSs, and 4 phenotypic markers) for the Medaka Oryzias latipes, a teleost fish of the order Beloniformes. Linkage was determined using a reference typing DNA panel from 39 cell lines derived from backcross progeny. This panel provided unlimited DNA for the accumulation of mapping data. The total map length of Medaka was 1354.5 cM and 24 linkage groups were detected, corresponding to the haploid chromosome number of the organism. Thirteen to 49 markers for each linkage group were obtained. Conserved synteny between Medaka and zebrafish was observed for 2 independent linkage groups. Unlike zebrafish, however, the Medaka linkage map showed obvious restriction of recombination on the linkage group containing the male-determining region (Y) locus compared to the autosomal chromosomes.
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Cited by
Zebrafish Comparative Genomics and the Origins of Vertebrate Chromosomes
Postlethwait, J. H., Woods, I. G., Ngo-Hazelett, P., Yan, Y.-L., Kelly, P. D., Chu, F., Huang, H., Hill-Force, A., & Talbot, W. S. (2000) · Genome Research · doi:10.1101/gr.164800 · Cited by 688
Medaka eyeless is the key factor linking retinal determination and eye growth
Loosli, F., Winkler, S., Burgtorf, C., Wurmbach, E., Ansorge, W., Henrich, T., Grabher, C., Arendt, D., Carl, M., Krone, A., et al. (2001) · Development · doi:10.1242/dev.128.20.4035 · Cited by 135
The medaka rs-3 locus required for scale development encodes ectodysplasin -A receptor.
Kondo, S., Kuwahara, Y., Kondo, M., Naruse, K., Mitani, H., Wakamatsu, Y., Ozato, K., Asakawa, S., Shimizu, N., & Shima, A. (2001) · Current Biology · doi:10.1016/s0960-9822(01)00324-4 · Cited by 141
Self-citationTeleost fish with specific genome duplication as unique models of vertebrate evolution
Sato, Y., & Nishida, M. (2010) · Environmental Biology of Fishes · doi:10.1007/s10641-010-9628-7 · Cited by 94
pnp4a Is the Causal Gene of the Medaka Iridophore Mutant guanineless
Kimura, T., Takehana, Y., & Naruse, K. (2017) · G3 Genes|Genomes|Genetics · doi:10.1534/g3.117.040675 · Cited by 46
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Metadata
- Authors
- Naruse, K., Fukamachi, S., Mitani, H., Kondo, M., Matsuoka, T., Kondo, S., Hanamura, N., Morita, Y., Hasegawa, K., Nishigaki, R., Shimada, A., Wada, H., Kusakabe, T., Suzuki, N., Kinoshita, M., Kanamori, A., Terado, T., Kimura, H., Nonaka, M., & Shima, A.
- Venue
- Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 2000-04-01
- Volume
- 154
- Issue
- 4
- Pages
- 1773-1784
- ISSN
- 0016-6731 (ISSN-L)
- 1943-2631
- OpenAlex
- W2118464638
- Cited by
- 333
- References
- 0
- FWCI
- 17.81
- Type
- journal article
- Language
- en
- Open access
- closed
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- Naruse, K., Fukamachi, S., Mitani, H., Kondo, M., Matsuoka, T., Kondo, S., Hanamura, N., Morita, Y., Hasegawa, K., Nishigaki, R., Shimada, A., Wada, H., Kusakabe, T., Suzuki, N., Kinoshita, M., Kanamori, A., Terado, T., Kimura, H., Nonaka, M., & Shima, A. (2000). A Detailed Linkage Map of Medaka, Oryzias latipes: Comparative Genomics and Genome Evolution. Genetics. https://doi.org/10.1093/genetics/154.4.1773
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