The DOI matches its Crossref record; 43 of the 43 references it cites were found in a registry or an index.
Interchromosomal duplications of the adrenoleukodystrophy locus: a phenomenon of pericentromeric plasticity
Abstract
A 9.7 kb segment encompassing exons 7-10 of the adrenoleukodystrophy (ALD) locus of the X chromosome has duplicated to specific locations near the pericentromeric regions of human chromosomes 2p11,10p11, 16p11 and 22q11. Comparative sequence analysis reveals 92-96% nucleotide identity, indicating that the autosomal ALD paralogs arose relatively recently during the course of higher primate evolution (5-10 million years ago). Analysis of sequences flanking the duplication region identifies the presence of an unusual GCTTTTTGC repeat which may be a sequence-specific integration site for the process of pericentromeric-directed transposition. The breakpoint sequence and phylogenetic analysis predict a two-step transposition model, in which a duplication from Xq28 to pericentromeric 2p11 occurred once, followed by a rapid distribution of a larger duplicon cassette among the pericentromeric regions. In addition to facilitating more effective mutation detection among ALD patients, these findings provide further insight into the molecular basis underlying a pericentromeric-directed mechanism for non-homologous interchromosomal exchange.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“While various pseudogenes were originally attributed to chromosomes 1, 2, 10, 16, 20, and 22 by polymerase chain reaction analysis of monochromosomal mapping panels and by the use of fluorescence in situ hybridization (FISH), five different pseudogenes are now assigned to chromosomal regions 2p11 (two copies), 10p11, 16p11, and 22q11.31,47”
From The genetic landscape of X-linked adrenoleukodystrophy: inheritance, mutations, modifier genes, and diagnosis (2015) · cites this paper as [47]
In the citing paper
“These all consist of exons 7–10 of the ABCD1 gene and are derived from one ancestral duplication, probably to chromosome 2, which was followed by further duplications in a process termed pericentromeric plasticity.47”
From The genetic landscape of X-linked adrenoleukodystrophy: inheritance, mutations, modifier genes, and diagnosis (2015) · cites this paper as [47]
Citations
Cites
Putative X-linked adrenoleukodystrophy gene shares unexpected homology with ABC transporters
Mosser, J., Douar, A.-M., Sarde, C.-O., Kioschis, P., Feil, R., Moser, H., Poustka, A.-M., Mandel, J.-L., & Aubourg, P. (1993) · Nature · doi:10.1038/361726a0 · Cited by 1,202
The evolution of genes: the chicken preproinsulin gene
Perler, F. B. (1980) · Cell · doi:10.1016/0092-8674(80)90641-8 · Cited by 699
Recombination at the human α-globin gene cluster: Sequence features and topological constraints
Nicholls, R. D., Fischel‐Ghodsian, N., & Higgs, D. R. (1987) · Cell · doi:10.1016/0092-8674(87)90289-3 · Cited by 345
DNA Sequences Mediating Class Switching in α-Immunoglobulins
Davis, M. M., Kim, S. K., & Hood, L. (1980) · Science · doi:10.1126/science.6774415 · Cited by 238
Vogt, P. H. (1990) · Human Genetics · doi:10.1007/bf00196228 · Cited by 202
Eichler, E. E. (1996) · Human Molecular Genetics · doi:10.1093/hmg/5.7.899 · Cited by 148
Self-citationNumbers and Ratios of Visual Pigment Genes for Normal Red-Green Color Vision
Neitz, M., & Neitz, J. (1995) · Science · doi:10.1126/science.7863325 · Cited by 131
Spectrum of mutations in the gene encoding the adrenoleukodystrophy protein.
(1995) · Europe PMC (PubMed Central) · Cited by 130
Molecular analyses of 17p11.2 deletions in 62 Smith-Magenis syndrome patients.
Juyal, R. C., Figuera, L. E., Hauge, X., Elsea, S. H., Lupski, J. R., Greenberg, F., Baldini, A., & Patel, P. I. (1996) · PubMed Central · Cited by 127
Archidiacono, N., Antonacci, R., Marzella, R., Finelli, P., Lonoce, A., & Rocchi, M. (1995) · Genomics · doi:10.1016/0888-7543(95)80048-q · Cited by 114
Flagged first, then by citations
Cited by
Sorted by citations
Items 101–143 of 143
Dasouki, M. (2017) · Elsevier eBooks · doi:10.1016/b978-0-12-802896-4.00007-9 · Cited by 11
Chromosomal Heteromorphisms and Cancer Susceptibility Revisited
Liehr, T. (2022) · Cells · doi:10.3390/cells11203239 · Cited by 10
The pericentromeric region of human chromosome 11: evidence for a chromosome-specific duplication
Zhang, J., Qin, S., Sait, S. N. J., Haley, L. L., Henry, W. M., Higgins, M. J., Nowak, N. J., Shows, T. B., & Gerhard, D. S. (2001) · Cytogenetic and Genome Research · doi:10.1159/000048805 · Cited by 10
Hildmann, T., Kong, X., O’Brien, J., Rießelmann, L., Christensen, H. M., Dagand, E., Lehrach, H. R., & Yaspo, M. (1999) · Genome Research · doi:10.1101/gr.9.4.360 · Cited by 10
Evolutionary Dynamics of the POTE Gene Family in Human and Nonhuman Primates
Maggiolini, F. A. M., Mercuri, L., Antonacci, F., Anaclerio, F., Calabrese, F. M., Lorusso, N., L’Abbate, A., Sorensen, M., Giannuzzi, G., Eichler, E. E., et al. (2020) · Genes · doi:10.3390/genes11020213 · Cited by 9
Self-citationThe Pathological Consequences and Evolutionary Implications of Recent Human Genomic Duplications
O’Keefe, C. L., & Eichler, E. E. (2000) · Computational biology · doi:10.1007/978-94-011-4309-7_5 · Cited by 9
Self-citationScott, I., Blitz, I. L., Pappano, W., Maas, S. A., Cho, K. W. Y., & Greenspan, D. (2001) · Nature · doi:10.1038/35079659 · Cited by 2
An eutherian intronic sequence gave rise to a major satellite DNA in Platyrrhini
Valeri, M. P., Dias, G. B., Pereira, V. D. S., Kuhn, G. C. S., & Svartman, M. (2018) · Biology Letters · doi:10.1098/rsbl.2017.0686 · Cited by 8
Evolutionary analysis of the highly dynamic CHEK2duplicon in anthropoids
Münch, C., Kirsch, S., Fernandes, A. M., & Schempp, W. (2008) · BMC Evolutionary Biology · doi:10.1186/1471-2148-8-269 · Cited by 8
Lan, F., Wang, Z., Xie, H., Huang, L., Ke, L., Yang, B.-S., & Zhu, Z. (2011) · Clinica Chimica Acta · doi:10.1016/j.cca.2011.01.036 · Cited by 8
Genetic analysis and prenatal diagnosis of 76 Chinese families with X‐linked adrenoleukodystrophy
Liu, S., Li, L., Wu, H., Pei, P., Zheng, X., Pan, H., Bao, X., Qi, Y., & Ma, Y. (2021) · Molecular Genetics & Genomic Medicine · doi:10.1002/mgg3.1844 · Cited by 7
Giorgi, D., Ferraz, C., Mattéi, M., DEMAILLE, J. G., & Rouquier, S. (2001) · Genomics · doi:10.1006/geno.2001.6571 · Cited by 7
New Nomenclature of Human ABC Transporter Genes.
Ishikawa, T., ALLIKIMETS, R., Dean, M. C., Higgins, C. F., Ling, V. W. T., & Wain, H. (2000) · Drug Metabolism and Pharmacokinetics · doi:10.2133/dmpk.15.8 · Cited by 7
Assum, G., Pasantes, J. J., Gläser, B., Schempp, W., & Wöhr, G. (1998) · Mammalian Genome · doi:10.1007/s003359900680 · Cited by 6
Novel exon nucleotide deletion causes adrenoleukodystrophy in a Brazilian family
Valadares, E. R., Trindade, A., de Oliveira, L. R., Arantes, R. R., Daker, M. V., Viana, B. D. M., Haase, V. G., Jardim, L., Lopes, G. C., & Godard, A. L. B. (2011) · Genetics and Molecular Research · doi:10.4238/vol10-1gmr975 · Cited by 4
Segmental Duplications in the Human Genome
Lacroix, M.-H., Oparina, N. Y., & Mashkova, T. D. (2003) · Molecular Biology · doi:10.1023/a:1023333302552 · Cited by 4
Ruminant-specific multiple duplication events of PRDM9 before speciation
Padhi, A., Shen, B., Jiang, J., Zhou, Y., Liu, G. E., & Ma, L. (2017) · BMC Evolutionary Biology · doi:10.1186/s12862-017-0892-4 · Cited by 3
A constitutional telomeric translocation showing meiotic instability
Josifova, D. J., Mazzaschi, R. L. P., Ballard, T., Ogilvie, C. M., & Splitt, M. P. (2006) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.31216 · Cited by 3
Sharp, A. J., & Eichler, E. E. (2007) · Humana Press eBooks · doi:10.1007/978-1-59745-039-3_5 · Cited by 3
Self-citationAlmashanu, S., & Valle, D. L. (2003) · Elsevier eBooks · doi:10.1016/b978-012352551-2/50025-1 · Cited by 3
Genomic disorders in the genomics era
Zepeda‐Mendoza, C. J., & Gonzaga-Jauregui, C. G. (2021) · Elsevier eBooks · doi:10.1016/b978-0-12-820140-4.00004-1 · Cited by 2
Segmental Duplications and Genetic Disease
Yilmaz, F., Shaikh, T. H., & Emanuel, B. S. (2017) · Wiley eBooks · doi:10.1002/9780470015902.a0006230.pub3 · Cited by 2
SSCP: a tool for contig building of duplicated genomic regions
López-Correa, C., Duhamel, H., Brems, H., Marynen, P., Legius, E., & Vermeesch, J. R. (2000) · Technical Tips Online · doi:10.1016/s1366-2120(08)70154-5 · Cited by 2
Oparina, N. Y., Lacroix, M.-H., Rychkov, A. A., & Mashkova, T. D. (2003) · Molecular Biology · doi:10.1023/a:1023337403460 · Cited by 2
Overview of genetic mutations causing adrenoleukodystrophy: A case-series study
Fathi, M., Khalilian, S., Sayad, A., Karimzadeh, P., Ahmadabadi, F., Ghafouri-Fard, S., & Miryounesi, M. (2025) · Molecular Genetics and Metabolism Reports · doi:10.1016/j.ymgmr.2025.101237 · Cited by 2
Basic Concepts in Molecular Pathology
Killeen, A. A. (2004) · Humana Press eBooks · doi:10.1007/978-1-59259-431-3_1 · Cited by 1
Chromosome‐specific Repeats (Low‐copy Repeats)
Potier, M., Golfier, G., & Eichler, E. E. (2007) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0005033.pub2 · Cited by 1
Self-citationSegmental duplications and the human genome
Vallente, R. U., & Eichler, E. E. (2005) · Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics · doi:10.1002/047001153x.g203205 · Cited by 1
Self-citationAbstracts from the Eighteenth Annual Conference of the United Leukodystrophy Foundation
Moser, H. W. (1999) · Journal of Molecular Neuroscience · doi:10.1385/jmn:13:3:211 · Cited by 1
Identification of two de novo mutations in Chinese patients with X-linked adrenoleukodystrophy
Wang, Z., Ke, L., Yan, A.-Z., Zhu, Z., & Lan, F. (2008) · Clinical Chemistry and Laboratory Medicine (CCLM) · doi:10.1515/cclm.2008.331 · Cited by 1
Sequence Ready Characterization of the Pericentromeric Region of 19p12
Eichler, E. E. (2006) · doi:10.2172/890705
Self-citationA Novel Framework for the Identification and Analysis of Duplicons between Human and Chimpanzee
Chuang, T., Wu, S.-Z., & Huang, Y. (2013) · BioMed Research International · doi:10.1155/2013/264532
Boixader, A. A. (2006) · LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)
Genome Plasticity and Chromosome Evolution
Miller, O. J., & Therman, E. (2001) · Springer eBooks · doi:10.1007/978-1-4613-0139-4_30
Dunham, I. (2002) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.1006335.79305
Segmental Duplications and Genetic Disease
Emanuel, B. S., & Shaikh, T. H. (2006) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0006230
Wyandt, H. E., Wilson, G. N., & Tonk, V. S. (2017) · Springer eBooks · doi:10.1007/978-981-10-3035-2_5
Wyandt, H. E., & Tonk, V. S. (2011) · Springer eBooks · doi:10.1007/978-94-007-0896-9_5
Chromosome‐specific Repeats (Low‐copy Repeats)
Potier, M., Golfier, G., & Eichler, E. E. (2005) · Encyclopedia of Life Sciences · doi:10.1038/npg.els.0005033
Self-citationSegmental Duplications and Genetic Disease
Emanuel, B. S., & Shaikh, T. H. (2008) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0006230.pub2
(2013) · Elsevier eBooks · doi:10.1016/b978-0-12-404631-3.16001-5
Genes versus environment in ocular refraction
(2002) · Journal of Medical Genetics · doi:10.1136/jmg.39.3.177
Additional file 1 of Modelling segmental duplications in the human genome
Abdullaev, E. T., Umarova, I. R., & Arndt, P. F. (2021) · Figshare · doi:10.6084/m9.figshare.14903832
Metadata
- Authors
- Eichler, E.
- Affiliations
- Lawrence Livermore National Laboratory (US)
- Corresponding author
- Eichler, E.
- ORCID
- Eichler, E.
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 1997-07-01
- Volume
- 6
- Issue
- 7
- Pages
- 991-1002
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2125094037
- Cited by
- 143
- References
- 43
- Citations by year
- 2025: 2 · 2024: 1 · 2022: 1 · 2021: 4 · 2020: 1 · 2019: 1 · 2018: 1 · 2017: 4 · 2015: 1 · 2013: 3 · 2012: 1
- FWCI
- 9.38
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- HighWire Press Open Archive (submittedVersion)
- CINECA IRIS Institutional Research Information System (University of Bari Aldo Moro) (submittedVersion)
- Funders
- National Institute on Deafness and Other Communication Disorders (P01DC002027, DC02027)
- National Institute of General Medical Sciences
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomic variations and chromosomal abnormalities
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Chromosomal and Genetic Variations
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genome Rearrangement Algorithms
- Keywords
- adrenoleukodystrophy, transposable elements, duplicons, X chromosome, chromosome 22q11, nonhomologous recombination, primate evolution, phylogenetic analysis
- MeSH terms
- Adrenoleukodystrophy, Amino Acid Sequence, Base Sequence, Centromere, Chromosome Mapping, Chromosomes, Human, Biological Evolution, Humans, Male, Molecular Sequence Data, Phylogeny, Repetitive Sequences, Nucleic Acid, X Chromosome, Sequence Homology, Amino Acid, Sequence Analysis, Chromosome Breakage
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review