The genetic landscape of X-linked adrenoleukodystrophy: inheritance, mutations, modifier genes, and diagnosis
Open accessAbstract
X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ABCD1 gene encoding a peroxisomal ABC transporter. In this review, we compare estimates of incidence derived from different populations in order to provide an overview of the worldwide incidence of X-ALD. X-ALD presents with heterogeneous phenotypes ranging from adrenomyeloneuropathy (AMN) to inflammatory demyelinating cerebral ALD (CALD). A large number of different mutations has been described, providing a unique opportunity for analysis of functional domains within ABC transporters. Yet the molecular basis for the heterogeneity of clinical symptoms is still largely unresolved, as no correlation between genotype and phenotype exists in X-ALD. Beyond ABCD1, environmental triggers and other genetic factors have been suggested as modifiers of the disease course. Here, we summarize the findings of numerous reports that aimed at identifying modifier genes in X-ALD and discuss potential problems and future approaches to address this issue. Different options for prenatal diagnosis are summarized, and potential pitfalls when applying next-generation sequencing approaches are discussed. Recently, the measurement of very long-chain fatty acids in lysophosphatidylcholine for the identification of peroxisomal disorders was included in newborn screening programs.
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Written from the paper’s full text.
TL;DR
X-linked adrenoleukodystrophy (X-ALD) is caused by ABCD1 mutations and presents with heterogeneous phenotypes, chiefly adrenomyeloneuropathy (AMN) and cerebral ALD (CALD), with no generalized genotype–phenotype correlation. This review summarizes incidence estimates, ABCD1 mutation features, modifier-gene studies, and diagnostic approaches including prenatal testing and newborn screening.
Key findings
- Average X-ALD incidence in male patients is estimated between 1:20,000 and 1:30,000; a Norwegian study found a combined male-plus-female incidence of 1:61,000, while Bezman et al reported an extrapolated combined rate of 1:16,800. Prevalence estimates are around 1:200,000 for males and 1:100,000 for females.
- CALD lifetime risk for male X-ALD patients is estimated at at least 60%, with peak occurrence between 5 and 12 years of age; risk of developing the inflammatory form between 5 and 12 years is around 35%–40%. De novo ABCD1 mutations have been reported in 4.1% to 19% of cases.
- The X-ALD database contains 695 non-recurrent mutations, including 343 missense mutations affecting 209 different amino acids; no generalized correlation exists between ABCD1 mutation type and AMN versus CALD phenotype.
- Plasma VLCFA measurement detects about 85% of heterozygous female carriers, so ABCD1 mutation analysis is needed for proper identification; newborn screening using C26:0 lysophosphatidylcholine from dried blood spots has been implemented, including in New York State since 2014.
Methods
- Narrative review comparing incidence estimates from different populations and summarizing published reports on ABCD1 mutations, modifier genes, X-inactivation, prenatal diagnosis, next-generation sequencing, and newborn screening.
- Data sources include epidemiological studies from Europe, North and South America, Asia, and Australasia; the X-ALD mutation database; and association, segregation, and gene-expression studies of candidate modifier genes.
- Main analysis is qualitative synthesis; no new primary data, systematic search strategy, or meta-analysis is described.
Limitations
- The paper states that incidence/prevalence estimates are limited by clinical heterogeneity with late onset, small numbers of subjects, differences in pedigree characterization, lack of centralized recording in some countries, and underdiagnosis of mildly affected males and heterozygous females.
- The paper states that modifier-gene studies face low subject numbers and, in some cases, problems defining non-inflammatory subjects; negative association results should not necessarily exclude a modifier gene but may indicate it is not a major determinant.
- Evident from the text: as a narrative review, it does not report a systematic literature search or quantitative synthesis, and the molecular basis for phenotypic heterogeneity and the role of skewed X-inactivation remain unresolved.
Model-written summary. Check it against the paper before relying on it.
Integrity signals
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Cites
Statistics
Claims the paper makes
29 of 101 cited sources checked · 11 supported · 1 flagged · accuracy not yet measured
- Premisecitation
The feasibility of C26:0-LPC determination has been proven by two large pilot studies based on either liquid chromatography MS/MS or flow injection analysis MS/MS.
“The feasibility of C26:0-LPC determination has been proven by two large pilot studies based on either liquid chromatography MS/MS72 or flow injection analysis MS/MS.73”
Quote in the paperSubstantial claim1 of 2 sources checked- cites [72] Theda C Gibbons K Defor TE Newborn screening for X-linked adrenoleukodystrophy: further evidence high throughput screening is feasible Mol Genet Metab 2014 111 1 55 57 24268529 PMC3935823 source
Citation 73 is attached specifically to the flow-injection MS/MS pilot study. The cited paper’s Methods (§2.2) instead describe chromatography using a UPLC column before MS/MS, and its Results (§3) report analysis of 4,689 newborn samples by that LC-MS/MS method. It supports the feasibility of screening, but not the flow-injection method attributed to it. (LLM, conf=0.88)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measured - cites [73] Turgeon CT Moser AB Morkrid L Streamlined determination of lysophosphatidylcholines in dried blood spots for newborn screening of X-linked adrenoleukodystrophy Mol Genet Metab 2015 114 1 46 50 25481105 source
- Premisecitation
Dysfunction of ABCD1 results in impaired degradation of VLCFAs in peroxisomes and consequently their accumulation in various lipid species in tissues and body fluids.
“The dysfunction of ABCD1 results in impaired degradation of VLCFAs in peroxisomes and consequently leads to their accumulation in various lipid species in tissues and body fluids.7”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [7] Morita M Imanaka T Peroxisomal ABC transporters: structure, function and role in disease Biochim Biophys Acta 2012 1822 9 1387 1396 22366764 source
Section 5.1 states that ABCD1 dysfunction reduces peroxisomal VLCFA β-oxidation and increases VLCFA levels in the plasma and tissues of patients with X-ALD. The copy does not establish the further claim that VLCFAs accumulate in various lipid species in those tissues and body fluids; section 5.2 mentions VLCFA-containing complex lipids and phospholipids only in a proposed mechanism. (LLM, conf=0.84)
Experimental — accuracy not yet measured
- Premisecitation
ABCD1 codes for the peroxisomal transporter ABCD1, which mediates the import of very long-chain fatty acid (VLCFA) CoA esters across the peroxisomal membrane.
“The ABCD1 gene codes for the peroxisomal transporter ATP-binding cassette subfamily D member 1 (ABCD1, formerly ALDP), which mediates the import of very long-chain fatty acid (VLCFA) CoA esters across the peroxisomal membrane.5,6”
Quote in the paperSubstantial claim1 of 2 sources checked- cites [5] Wiesinger C Kunze M Regelsberger G Forss-Petter S Berger J Impaired very long-chain acyl-CoA beta-oxidation in human X-linked adrenoleukodystrophy fibroblasts is a direct consequence of ABCD1 transporter dysfunction J Biol Chem 2013 288 26 19269 19279 23671276 PMC3696697 source
- cites [6] van Roermund CW Visser WF Ijlst L The human peroxisomal ABC half transporter ALDP functions as a homodimer and accepts acyl-CoA esters FASEB J 2008 22 12 4201 4208 18757502 source
- Interpretationreasoning
The most plausible explanation for incorrect detection of c.1823 G>A as a non-deleterious SNP is that the same variant is present in an ABCD1 pseudogene on chromosome 2 and was mistakenly attributed to the real ABCD1 gene.
“Therefore, the most plausible explanation for the incorrect detection of the mutation in the former study52 is that the same variant is present in an ABCD1 pseudogene located on chromosome 2 and was by mistake attributed to the real ABCD1 gene.”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [52] Lupski JR Reid JG Gonzaga-Jauregui C Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy N Engl J Med 2010 362 13 1181 1191 20220177 PMC4036802 source
The Results (Genome Variation; page unavailable) report an ABCD1 SNP in a patient without adrenoleukodystrophy and suggest that its classification as a disease mutation might be erroneous. The paper does not identify c.1823 G>A, an ABCD1 pseudogene on chromosome 2, or mistaken attribution to the real gene as the explanation. The citing authors present that explanation as their own inference. (LLM, conf=0.85)
Experimental — accuracy not yet measured
- Premisecitation
In patients with subclinical adrenal insufficiency, monitoring and early initiation of hormone replacement therapy can avoid adrenal crises and life-threatening events.
“In addition, in patients with subclinical adrenal insufficiency, monitoring and early initiation of hormone replacement therapy can avoid adrenal crises and life-threatening events.30,67”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites [30] Dubey P Raymond GV Moser AB Kharkar S Bezman L Moser HW Adrenal insufficiency in asymptomatic adrenoleukodystrophy patients identified by very long-chain fatty acid screening J Pediatr 2005 146 4 528 532 15812458 source
- cites [67] Polgreen LE Chahla S Miller W Early diagnosis of cerebral X-linked adrenoleukodystrophy in boys with Addison’s disease improves survival and neurological outcomes Eur J Pediatr 2011 170 8 1049 1054 21279382 PMC3101278 source
The Discussion (page unavailable) mentions monitoring boys with X-linked adrenoleukodystrophy for adrenal insufficiency, while the Methods describe testing adrenal function. The paper attributes improved survival and neurological outcomes to early diagnosis of cerebral disease and hematopoietic cell transplantation. Searches for hormone or steroid replacement and adrenal crises found no passage addressing whether early replacement therapy prevents crises or life-threatening events. (LLM, conf=0.74)
Experimental — accuracy not yet measured
- Premisecitation
The very N-terminal part of ABCD1 precedes the PEX19 binding site, which is required for proper peroxisomal targeting of ABCD1.
“The very N-terminal part of the protein precedes the PEX19 binding site, which is required for proper peroxisomal targeting of ABCD1.78”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [78] Halbach A Lorenzen S Landgraf C Volkmer-Engert R Erdmann R Rottensteiner H Function of the PEX19-binding site of human adrenoleukodystrophy protein as targeting motif in man and yeast. PMP targeting is evolutionarily conserved J Biol Chem 2005 280 22 21176 21182 15781447 source
- Premisecitation
Two independent association studies comparing ABCD2 and ABCD3 polymorphisms with different clinical phenotypes failed to determine significant correlations.
“However, two independent association studies comparing ABCD2 and ABCD3 polymorphisms with different clinical phenotypes failed to determine significant correlations.98,99”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites [98] Maier EM Mayerhofer PU Asheuer M X-linked adrenoleukodystrophy phenotype is independent of ABCD2 genotype Biochem Biophys Res Commun 2008 377 1 176 180 18834860 source
- cites [99] Matsukawa T Asheuer M Takahashi Y Identification of novel SNPs of ABCD1, ABCD2, ABCD3, and ABCD4 genes in patients with X-linked adrenoleukodystrophy (ALD) based on comprehensive resequencing and association studies with ALD phenotypes Neurogenetics 2011 12 1 41 50 20661612 PMC3029816 source
- The authors state this as an assumption: X-ALD patients without cerebral involvement at 45 years can be considered cases of “pure AMN”.
- Rests on an assumption: The likelihood for initiation of brain inflammation strongly diminishes with age.
- Premisecitation
Determination of C26:0 lysophosphatidylcholine (C26:0-LPC) from dried blood spots has turned out to be most promising for high-throughput biochemical screening for X-ALD and other metabolic disorders.
“Determination of C26:0 lysophosphatidylcholine (C26:0-LPC) from dried blood spots has turned out to be most promising and slightly different methods based on tandem mass spectrometry (MS/MS) were reported by different laboratories.68–71”
Quote in the paperSubstantial claim1 of 4 sources checked- cites [68] Matern D Oglesbee D Tortorelli S Newborn screening for lysosomal storage disorders and other neuronopathic conditions Dev Disabil Res Rev 2013 17 3 247 253 23798012 PMC3902890 source
The NBS for X-adrenoleukodystrophy section says C26:0-LPC can be elevated in dried blood spots from patients with X-ALD or Zellweger spectrum disorders, and that an improved LC-MS/MS assay is fast enough for high-throughput testing. It does not establish that the method has proved the most promising: the assay was still under pilot review, with test-performance data not yet reported. (LLM, conf=0.82)
Experimental — accuracy not yet measured - cites [69] Hubbard WC Moser AB Liu AC Newborn screening for X-linked adrenoleukodystrophy (X-ALD): validation of a combined liquid chromatography-tandem mass spectrometric (LC-MS/MS) method Mol Genet Metab 2009 97 3 212 220 19423374 source
- cites [70] Sandlers Y Moser AB Hubbard WC Kratz LE Jones RO Raymond GV Combined extraction of acyl carnitines and 26:0 lysophosphatidylcholine from dried blood spots: prospective newborn screening for X-linked adrenoleukodystrophy Mol Genet Metab 2012 105 3 416 420 22197596 source
- cites [71] Haynes CA De Jesus VR Improved analysis of C26:0-lysophosphatidylcholine in dried-blood spots via negative ion mode HPLC-ESI-MS/MS for X-linked adrenoleukodystrophy newborn screening Clin Chim Acta 2012 413 15–16 1217 1221 22503909 source
- Premisecitation
Two different studies found the very C-terminal region of ABCD1 to play a major role in homodimerization and heterodimerization of ABCD1.
“However, two different studies found the very C-terminal region to play a major role in homodimerization and heterodimerization of ABCD1.81,82”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites [81] Liu LX Janvier K Berteaux-Lecellier V Cartier N Benarous R Aubourg P Homo- and heterodimerization of peroxisomal ATP-binding cassette half-transporters J Biol Chem 1999 274 46 32738 32743 10551832 source
The Results (page unavailable) show that ABCD1/ALDP’s C-terminal fragment (residues 631–745) retained nearly normal interactions with ALDP and ALDRP, supporting a role in some homo- and heterodimerization. But it showed only background interaction with PMP70, and the Discussion (page unavailable) says the specific C-terminal subdomain responsible for dimerization could not be defined. The claim overstates how firmly this paper localizes that role to the very C-terminal region. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [82] Hillebrand M Verrier SE Ohlenbusch A Live cell FRET microscopy: homo- and heterodimerization of two human peroxisomal ABC transporters, the adrenoleukodystrophy protein (ALDP, ABCD1) and PMP70 (ABCD3) J Biol Chem 2007 282 37 26997 27005 17609205 source
- Interpretationcitation
If a mutated ABCD1 protein dimerizes with a functional monomer, it might exert a dominant-negative effect, resulting in a nonfunctional transporter.
“If such a mutated ABCD1 protein dimerizes with a functional monomer, it might exert a dominant-negative effect on its dimerization partner, thus resulting in a nonfunctional transporter.84”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [84] Unterrainer G Molzer B Forss-Petter S Berger J Co-expression of mutated and normal adrenoleukodystrophy protein reduces protein function: implications for gene therapy of X-linked adrenoleukodystrophy Hum Mol Genet 2000 9 18 2609 2616 11063720 source
- Premisecitation
Upon overexpression, ABCD2 and to some extent ABCD3 can compensate for the lack of ABCD1 in vivo and in vitro, making them candidates for modulation of the phenotype.
“Upon overexpression, ABCD2101–104 and, to some extent, ABCD35,102,105 can compensate for the lack of ABCD1 in vivo and in vitro, and therefore represent excellent candidates for a modulation of the phenotype.”
Quote in the paperNot a substantial claim3 of 6 sources checked- cites [101] Netik A Forss-Petter S Holzinger A Molzer B Unterrainer G Berger J Adrenoleukodystrophy-related protein can compensate functionally for adrenoleukodystrophy protein deficiency (X-ALD): implications for therapy Hum Mol Genet 1999 8 5 907 913 10196381 source
- cites [102] Kemp S Wei HM Lu JF Gene redundancy and pharmacological gene therapy: implications for X-linked adrenoleukodystrophy Nat Med 1998 4 11 1261 1268 9809549 source
- cites [103] Pujol A Ferrer I Camps C Functional overlap between ABCD1 (ALD) and ABCD2 (ALDR) transporters: a therapeutic target for X-adrenoleukodystrophy Hum Mol Genet 2004 13 23 2997 3006 15489218 source
The Introduction reports that ABCD2 (ALDR) overexpression compensates for ABCD1 loss in mice and cites correction of the defect in X-ALD fibroblasts, supporting the in vivo and in vitro ABCD2 claim. It describes ABCD3 (PMP70) as potentially having overlapping functions, but does not establish that ABCD3 overexpression compensates for ABCD1 loss. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [104] Muneer Z Wiesinger C Voigtlander T Werner HB Berger J Forss-Petter S ABCD2 is a strong modifier of the metabolic impairments in peritoneal macrophages of ABCD1-deficient mice PLoS One 2014 9 9 e108655 25255441 PMC4177892 source
- cites [5] Wiesinger C Kunze M Regelsberger G Forss-Petter S Berger J Impaired very long-chain acyl-CoA beta-oxidation in human X-linked adrenoleukodystrophy fibroblasts is a direct consequence of ABCD1 transporter dysfunction J Biol Chem 2013 288 26 19269 19279 23671276 PMC3696697 source
The paper’s introductory passage says that overexpressed ABCD2 and, to a lesser extent, ABCD3 can compensate for ABCD1 dysfunction in X-ALD patient fibroblasts, supporting the in vitro part of the claim. It does not establish compensation in vivo or demonstrate modulation of the clinical phenotype; it also says endogenous homologs do not rescue the defect. No page number is available in our copy. (LLM, conf=0.85)
Experimental — accuracy not yet measured - cites [105] Braiterman LT Zheng S Watkins PA Suppression of peroxisomal membrane protein defects by peroxisomal ATP binding cassette (ABC) proteins Hum Mol Genet 1998 7 2 239 247 9425230 source
- Premisecitation
Some ABCD1 mutations lead to stable and correctly localized proteins but without transporter activity.
“Some ABCD1 mutations lead to stable and correctly localized proteins but without transporter activity.75”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [75] Kemp S Pujol A Waterham HR ABCD1 mutations and the X-linked adrenoleukodystrophy mutation database: role in diagnosis and clinical correlations Hum Mutat 2001 18 6 499 515 11748843 source
The GENOTYPEPHENOTYPE section reports ABCD1 missense mutations with normal ALDP expression, supporting the claim that some mutant proteins remain stable. The FUNCTION OF ALDP section reports decreased ATP-binding capacity or reduced ATPase activity for two mutations, but does not establish that the mutant proteins are correctly localized or lack transporter activity altogether. Page numbers were not available in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measured
- Premisecitation
In many cell types, ABCD1 and ABCD2 have opposite expression patterns: where ABCD1 is high, ABCD2 is low, and vice versa.
“meaning that in cell types with high levels of ABCD1 expression, ABCD2 is often present at low abundance and vice versa.119–121”
Quote in the paperSubstantial claim1 of 3 sources checked- cites [119] Troffer-Charlier N Doerflinger N Metzger E Fouquet F Mandel JL Aubourg P Mirror expression of adrenoleukodystrophy and adrenoleukodystrophy related genes in mouse tissues and human cell lines Eur J Cell Biol 1998 75 3 254 264 9587057 source
- cites [120] Berger J Albet S Bentejac M The four murine peroxisomal ABC-transporter genes differ in constitutive, inducible and developmental expression Eur J Biochem 1999 265 2 719 727 10504404 source
- cites [121] Weber FD Wiesinger C Forss-Petter S X-linked adrenoleukodystrophy: very long-chain fatty acid metabolism is severely impaired in monocytes but not in lymphocytes Hum Mol Genet 2014 23 10 2542 2550 24363066 PMC3990157 source
- Interpretationcitation
The main reason ABCD2 fails to compensate is the opposite expression pattern of ABCD1 and ABCD2 in many cell types.
“Regarding ABCD2, the main reason for this seems to be the opposite expression pattern of ABCD1 and ABCD2 in many cell types, meaning that in cell types with high levels of ABCD1 expression, ABCD2 is often present at low abundance and vice versa.119–121”
Quote in the paperSubstantial claim1 of 3 sources checked- cites [119] Troffer-Charlier N Doerflinger N Metzger E Fouquet F Mandel JL Aubourg P Mirror expression of adrenoleukodystrophy and adrenoleukodystrophy related genes in mouse tissues and human cell lines Eur J Cell Biol 1998 75 3 254 264 9587057 source
- cites [120] Berger J Albet S Bentejac M The four murine peroxisomal ABC-transporter genes differ in constitutive, inducible and developmental expression Eur J Biochem 1999 265 2 719 727 10504404 source
- cites [121] Weber FD Wiesinger C Forss-Petter S X-linked adrenoleukodystrophy: very long-chain fatty acid metabolism is severely impaired in monocytes but not in lymphocytes Hum Mol Genet 2014 23 10 2542 2550 24363066 PMC3990157 source
- Premisecitation
Upon overexpression, ABCD2 and ABCD3 are in principle able to compensate for dysfunctional ABCD1.
“It has been reported that, upon overexpression, both of these homologs are in principle able to compensate for dysfunctional ABCD1.5,101–103”
Quote in the paperNot a substantial claim2 of 4 sources checked- cites [5] Wiesinger C Kunze M Regelsberger G Forss-Petter S Berger J Impaired very long-chain acyl-CoA beta-oxidation in human X-linked adrenoleukodystrophy fibroblasts is a direct consequence of ABCD1 transporter dysfunction J Biol Chem 2013 288 26 19269 19279 23671276 PMC3696697 source
- cites [101] Netik A Forss-Petter S Holzinger A Molzer B Unterrainer G Berger J Adrenoleukodystrophy-related protein can compensate functionally for adrenoleukodystrophy protein deficiency (X-ALD): implications for therapy Hum Mol Genet 1999 8 5 907 913 10196381 source
- cites [102] Kemp S Wei HM Lu JF Gene redundancy and pharmacological gene therapy: implications for X-linked adrenoleukodystrophy Nat Med 1998 4 11 1261 1268 9809549 source
- cites [103] Pujol A Ferrer I Camps C Functional overlap between ABCD1 (ALD) and ABCD2 (ALDR) transporters: a therapeutic target for X-adrenoleukodystrophy Hum Mol Genet 2004 13 23 2997 3006 15489218 source
The Introduction reports that overexpressed ABCD2 (ALDR) compensates for the absence of ABCD1 in mice. It identifies ABCD3 (PMP70) as a related transporter but does not report that ABCD3 overexpression compensates for dysfunctional ABCD1. Page numbers are unavailable in our copy. (LLM, conf=0.89)
Experimental — accuracy not yet measured
- Premisecitation
Chimeric heterodimers of ABCD1 and ABCD2 were shown in vitro to be functional.
“As chimeric heterodimers of ABCD1 and ABCD2 were shown in vitro to be functional, this would raise the possibility of different substrate preferences for such putative heterodimers.126”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [126] Geillon F Gondcaille C Charbonnier S Structure-function analysis of peroxisomal ATP-binding cassette transporters using chimeric dimers J Biol Chem 2014 289 35 24511 24520 25043761 PMC4148876 source
- Findingnone given
Missense mutations are rather equally distributed throughout the ABCD1 protein, with the exception of three regions devoid of disease-causing mutations.
“These missense mutations are rather equally distributed throughout the ABCD1 protein with the exception of three regions that are devoid of disease-causing mutations.”
Quote in the paperNot a substantial claim - Premisecitation
Between 4.1% and 19% of X-ALD cases carry mutations acquired de novo.
“While the majority of patients typically inherit the defective ABCD1 allele from one parent, between 4.1% and 19% of X-ALD cases have been reported to carry mutations acquired de novo”
Quote in the paperNot a substantial claim - Premisecitation
Even in monozygotic twins, different clinical phenotypes of X-ALD have been observed.
“Thirdly, even in monozygotic twins, different clinical phenotypes have been observed.34”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [34] Korenke GC Fuchs S Krasemann E Cerebral adrenoleukodystrophy (ALD) in only one of monozygotic twins with an identical ALD genotype Ann Neurol 1996 40 2 254 257 8773611 source
- Premisecitation
Plasma VLCFA levels strongly depend on dietary intake of VLCFAs, for example by consumption of peanuts.
“One possible diagnostic pitfall is the fact that plasma VLCFA levels strongly depend on dietary intake of VLCFAs, for example, by the consumption of peanuts.40”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [40] Lam C Wong D Cederbaum S Lim B Qu Y Peanut consumption increases levels of plasma very long chain fatty acids in humans Mol Genet Metab 2012 107 3 620 622 22864056 source
- Interpretationreasoning
Overall, the data suggest that no major differences in X-ALD incidence rates occur between countries across the world.
“Overall, the data suggest that no major differences in incidence rates occur between countries across the world.”
Quote in the paperNot a substantial claim - Premisecitation
When brain inflammation is detected early, it can be arrested by hematopoietic stem cell transplantation (HSCT).
“In cases where brain inflammation is detected early, it can be arrested by hematopoietic stem cell transplantation (HSCT).8”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [8] Peters C Charnas LR Tan Y Cerebral X-linked adrenoleukodystrophy: the international hematopoietic cell transplantation experience from 1982 to 1999 Blood 2004 104 3 881 888 15073029 source
- Premisecitation
Within individual kindreds, phenotypes of the entire clinical spectrum of X-ALD have been described.
“Secondly, within individual kindreds, phenotypes of the entire clinical spectrum of X-ALD have been described.15,32,33”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [15] Jardim LB da Silva AC Blank D X-linked adrenoleukodystrophy: clinical course and minimal incidence in South Brazil Brain Dev 2010 32 3 180 190 19269120 source
- cites [32] Berger J Molzer B Fae I Bernheimer H X-linked adrenoleukodystrophy (ALD): a novel mutation of the ALD gene in 6 members of a family presenting with 5 different phenotypes Biochem Biophys Res Commun 1994 205 3 1638 1643 7811247 source
- cites [33] Guimaraes CP Lemos M Sa-Miranda C Azevedo JE Molecular characterization of 21 X-ALD Portuguese families: identification of eight novel mutations in the ABCD1 gene Mol Genet Metab 2002 76 1 62 67 12175782 source
- Premisenone given
VLCFAs are elevated in all male X-ALD patients regardless of age, disease duration, metabolic status, or clinical symptoms.
“VLCFAs are elevated in all male X-ALD patients regardless of age, disease duration, metabolic status, or clinical symptoms.”
Quote in the paperSubstantial claim - Premisenone given
For heterozygous female carriers, the probability of transmission of the affected gene is 50% for both sons and daughters.
“For heterozygous female carriers, the probability for transmission of the affected gene is 50% for both sons and daughters.”
Quote in the paperNot a substantial claim - Interpretationreasoning
No generalized correlation exists between types of mutations in ABCD1 and the two main clinical phenotypes AMN and CALD.
“Based on several different observations, it is now well established that no generalized correlation exists between certain types of mutations in ABCD1 and the two main clinical phenotypes, ie, AMN and CALD, observed in X-ALD patients.”
Quote in the paperSubstantial claim - Premisecitation
Horn et al. found that no heterozygous females older than 50 years were free of neurological symptoms.
“Similarly, Horn et al found that no heterozygous females older than 50 years were free of neurological symptoms.24”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [24] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Age-dependent penetrance among females with X-linked adrenoleukodystrophy Brain 2015 138 Pt 2 e325 25149409 source
- Premisecitation
Even large deletions or frameshift mutations leading to complete absence of ABCD1 protein can lead to the milder AMN phenotype.
“Firstly, even large deletions or frameshift mutations leading to the complete absence of protein can lead to the milder AMN phenotype.31”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31] Smith KD Kemp S Braiterman LT X-linked adrenoleukodystrophy: genes, mutations, and phenotypes Neurochem Res 1999 24 4 521 535 10227685 source
- Premisecitation
Five different ABCD1 pseudogenes are assigned to chromosomal regions 2p11 (two copies), 10p11, 16p11, and 22q11.
“While various pseudogenes were originally attributed to chromosomes 1, 2, 10, 16, 20, and 22 by polymerase chain reaction analysis of monochromosomal mapping panels and by the use of fluorescence in situ hybridization (FISH), five different pseudogenes are now assigned to chromosomal regions 2p11 (two copies), 10p11, 16p11, and 22q11.31,47”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [31] Smith KD Kemp S Braiterman LT X-linked adrenoleukodystrophy: genes, mutations, and phenotypes Neurochem Res 1999 24 4 521 535 10227685 source
- cites [47] Eichler EE Budarf ML Rocchi M Interchromosomal duplications of the adrenoleukodystrophy locus: a phenomenon of pericentromeric plasticity Hum Mol Genet 1997 6 7 991 1002 9215666 source
- Premiseown data
Preliminary newborn screening results suggest an X-ALD incidence rate of around 1:30,000.
“Preliminary results already suggest a similar incidence rate of around 1:30,000.”
Quote in the paperNot a substantial claim - Premisecitation
VLCFAs are increased not only in X-ALD patients but also in other peroxisomal disorders such as peroxisomal biogenesis defects of the Zellweger syndrome spectrum or single enzyme defects of peroxisomal beta-oxidation.
“Furthermore, VLCFAs are not only increased in X-ALD patients, but also in other peroxisomal disorders such as peroxisomal biogenesis defects of the Zellweger syndrome spectrum or single enzyme defects of peroxisomal beta-oxidation (acyl-CoA oxidase deficiency and D-bifunctional protein deficiency).”
Quote in the paperSubstantial claim - Premisenone given
Two predominant phenotypes of X-ALD are AMN and the cerebral form of X-ALD (CALD).
“Two predominant phenotypes prevail: adrenomyeloneuropathy (AMN) and the cerebral form of X-ALD (CALD).”
Quote in the paperNot a substantial claim - Premisecitation
HSCT is thought to only arrest inflammatory demyelination and not impact non-inflammatory axonopathy.
“However, HSCT is thought to only arrest the inflammatory demyelination and not impact the non-inflammatory axonopathy.10”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [10] van Geel BM Poll-The BT Verrips A Boelens JJ Kemp S Engelen M Hematopoietic cell transplantation does not prevent myelopathy in X-linked adrenoleukodystrophy: a retrospective study J Inherit Metab Dis 2015 38 2 359 361 25488625 source
- Premisecitation
Other peroxisomal disorders can usually be excluded by measuring phytanic acid and plasmalogen levels.
“Although other peroxisomal disorders can usually be excluded by measuring phytanic acid and plasmalogen levels,46”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [46] Takemoto Y Suzuki Y Horibe R Shimozawa N Wanders RJ Kondo N Gas chromatography/mass spectrometry analysis of very long chain fatty acids, docosahexaenoic acid, phytanic acid and plasmalogen for the screening of peroxisomal disorders Brain Dev 2003 25 7 481 487 13129591 source
- Premisecitation
Recent reports suggest a substantial risk to develop CALD even at ages higher than 45 years.
“However, while CALD was previously considered to occur only rarely after the age of 45 years, recent reports suggest a substantial risk to develop CALD even at higher ages.27–29”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [27] de Beer M Engelen M van Geel BM Frequent occurrence of cerebral demyelination in adrenomyeloneuropathy Neurology 2014 83 24 2227 2231 25378668 source
- cites [28] Costello DJ Eichler FS Grant PE Auluck PK Case records of the Massachusetts General Hospital. Case 1-2009. A 57-year-old man with progressive cognitive decline N Engl J Med 2009 360 2 171 181 19129531 source
- cites [29] van Geel BM Bezman L Loes DJ Moser HW Raymond GV Evolution of phenotypes in adult male patients with X-linked adrenoleukodystrophy Ann Neurol 2001 49 2 186 194 11220738 source
- Premisenone given
All four members of the ABCD protein family are half transporters that must dimerize to form functional units.
“All four members of the ABCD protein family are half transporters, which have to dimerize in order to form functional units.”
Quote in the paperSubstantial claim - Premisecitation
Segregation analysis based on 3,862 individuals from 89 kindreds suggested the presence of an autosomal modifier locus.
“Indeed, segregation analysis based on 3,862 individuals from 89 kindreds suggested the presence of an autosomal modifier locus.96”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [96] Moser HW Moser AB Smith KD Adrenoleukodystrophy: phenotypic variability and implications for therapy J Inherit Metab Dis 1992 15 4 645 664 1528023 source
- Premisecitation
A recent population-based Norwegian study reported a higher de novo mutation rate of at least 19%.
“However, a recent population-based Norwegian study reported a higher de novo mutation rate of at least 19%.14”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [14] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Adrenoleukodystrophy in Norway: high rate of de novo mutations and age-dependent penetrance Pediatr Neurol 2013 48 3 212 219 23419472 source
- Premisecitation
HSCT is only effective in CALD when performed at an early disease stage, because cerebral inflammation still progresses for 12-18 months after the procedure.
“For instance, HSCT is only effective in CALD when performed at an early disease stage, because cerebral inflammation still progresses for 12–18 months after the procedure.8,66”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [8] Peters C Charnas LR Tan Y Cerebral X-linked adrenoleukodystrophy: the international hematopoietic cell transplantation experience from 1982 to 1999 Blood 2004 104 3 881 888 15073029 source
- cites [66] Cartier N Aubourg P Hematopoietic stem cell transplantation and hematopoietic stem cell gene therapy in X-linked adrenoleukodystrophy Brain Pathol 2010 20 4 857 862 20626747 PMC8094635 source
- Premisecitation
A polymorphism within the TCN2 gene was found to be significantly associated with cerebral demyelination in X-ALD.
“However, a polymorphism within the TCN2 gene was found to be significantly associated with cerebral demyelination in X-ALD.100,107,108”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [100] Semmler A Bao X Cao G Genetic variants of methionine metabolism and X-ALD phenotype generation: results of a new study sample J Neurol 2009 256 8 1277 1280 19353223 source
- cites [107] Cao GN Bao XH Xiong H Wu Y Wu XR Association of genetic polymorphisms in methionine metabolism genes with X-linked adrenoleukodystrophy Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2011 28 3 279 282 Chinese 21644223 source
- cites [108] Linnebank M Kemp S Wanders RJ Methionine metabolism and phenotypic variability in X-linked adrenoleukodystrophy Neurology 2006 66 3 442 443 16476952 source
- The authors state this as an assumption: X-ALD patients without cerebral involvement at 45 years can be considered cases of “pure AMN”.
- Rests on an assumption: The likelihood for initiation of brain inflammation strongly diminishes with age.
- Interpretationnone given
The unaffected region in the middle of ABCD1 (AA 430-470) acts as a linker between the transmembrane and ATP-binding domains, probably allowing structural flexibility.
“The unaffected region in the middle of the protein (AA 430–470) acts as a linker between the transmembrane and the ATP-binding domains of ABCD1, probably allowing a considerable degree of structural flexibility.”
Quote in the paperNot a substantial claim - Premisecitation
A comprehensive study based on molecular characterization of 489 families found only 4.1% of index cases to carry de novo mutations in ABCD1.
“Similarly, a comprehensive study based on molecular characterization of 489 families found only 4.1% of index cases to carry de novo mutations in the ABCD1 gene.11”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [11] Wang Y Busin R Reeves C X-linked adrenoleukodystrophy: ABCD1 de novo mutations and mosaicism Mol Genet Metab 2011 104 1–2 160 166 21700483 source
- Interpretationreasoning
Owing to X-inactivation, negative dominance should not have harmful consequences for heterozygous carriers.
“Owing to X-inactivation, negative dominance should not have any harmful consequences at all for heterozygous carriers.”
Quote in the paperNot a substantial claim - Interpretationreasoning
Not one single major factor is responsible for the different clinical phenotypes in X-ALD.
“In summary, it appears that not one single major factor is responsible for the different clinical phenotypes in X-ALD.”
Quote in the paperSubstantial claim - Interpretationreasoning
At endogenous basal levels, ABCD2 and ABCD3 fail to compensate for ABCD1 deficiency, as they do not prevent clinical manifestations in X-ALD patients.
“However, at the endogenous basal levels, ABCD2 and ABCD3 obviously fail to compensate for ABCD1 deficiency, as they are not able to prevent the clinical manifestations in X-ALD patients.”
Quote in the paperSubstantial claim - Interpretationreasoning
The likelihood for this to occur may depend on specific genetic modifiers.
“Thus, it is possible that independently of the genetic background, every male X-ALD patient might be at risk of developing the inflammatory form of the disease in response to environmental factors, but the likelihood for this to occur may depend on specific genetic modifiers.”
Quote in the paperSubstantial claim - Premisereasoning
Genes with a smaller influence typically remain below the significance threshold level in association studies with low sample numbers.
“As studies with relatively low sample numbers can only detect genetic associations with a relatively large effect on the disease course, genes with a smaller influence typically remain below the significance threshold level.”
Quote in the paperSubstantial claim - Interpretationreasoning
For the inflammatory demyelination in children and adults, next to genetic modifiers, different environmental factors are likely to be involved as triggers, contributing to the overall complexity of X-ALD.
“For the inflammatory demyelination in children and adults, next to genetic modifiers, different environmental factors are likely to be involved as triggers, contributing to the overall complexity of X-ALD.”
Quote in the paperSubstantial claim - Interpretationreasoning
Several different genetic and environmental factors contribute to some extent to the phenotypic variability in X-ALD.
“More likely, several different genetic as well as environmental factors contribute to some extent to the phenotypic variability in X-ALD.”
Quote in the paperSubstantial claim - Premisereasoning
Association studies in rare diseases like X-ALD inevitably analyze low numbers of subjects.
“An obvious, although often unavoidable, problem in carrying out association studies in rare diseases like X-ALD, is the inevitably low number of analyzed subjects.”
Quote in the paperSubstantial claim - Premisecitation
For ABCD2, ABCD3, and ACSVL1, no significant differences in mRNA expression levels were found in brain tissues when comparing CALD and AMN.
“While for ABCD2, ABCD3, and ACSVL1 no significant differences in mRNA expression levels were found in brain tissues when comparing CALD and AMN”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [115] Asheuer M Bieche I Laurendeau I Decreased expression of ABCD4 and BG1 genes early in the pathogenesis of X-linked adrenoleukodystrophy Hum Mol Genet 2005 14 10 1293 1303 15800013 source
- Premisecitation
Previous studies investigating the association of HLA type II haplotypes with cerebral involvement were not able to demonstrate significant associations.
“However, previous studies investigating this association were not able to demonstrate significant associations of certain HLA type II haplotypes with cerebral involvement.110–112”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [110] Berger J Bernheimer H Fae I Association of X-linked adrenoleukodystrophy with HLA DRB1 alleles Biochem Biophys Res Commun 1995 216 2 447 451 7488132 source
- cites [111] Schmidt S Marrosu GM Kolsch H Genetic variations and humoral immune responses to myelin oligodendroglia glycoprotein in adult phenotypes of X-linked adrenoleukodystrophy J Neuroimmunol 2003 135 1–2 148 153 12576235 source
- cites [112] McGuinness MC Powers JM Bias WB Human leukocyte antigens and cytokine expression in cerebral inflammatory demyelinative lesions of X-linked adrenoleukodystrophy and multiple sclerosis J Neuroimmunol 1997 75 1–2 174 182 9143252 source
- The authors state this as an assumption: X-ALD patients without cerebral involvement at 45 years can be considered cases of “pure AMN”.
- Rests on an assumption: The likelihood for initiation of brain inflammation strongly diminishes with age.
- Premisereasoning
Studies with relatively low sample numbers can only detect genetic associations with a relatively large effect on the disease course.
“As studies with relatively low sample numbers can only detect genetic associations with a relatively large effect on the disease course, genes with a smaller influence typically remain below the significance threshold level.”
Quote in the paperSubstantial claim - Interpretationcitation
The amount of VLCFAs may be directly related to the risk of developing inflammatory demyelination.
“There is some evidence that the amount of VLCFAs may be directly related to the risk of developing inflammatory demyelination.115”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [115] Asheuer M Bieche I Laurendeau I Decreased expression of ABCD4 and BG1 genes early in the pathogenesis of X-linked adrenoleukodystrophy Hum Mol Genet 2005 14 10 1293 1303 15800013 source
- Interpretationnone given
The individual genetic background, involving many different genes, may be responsible for the age of onset of AMN symptoms in male as well as in female patients.
“Although X-ALD is a monogenic disorder, the individual genetic background, involving many different genes, may be responsible for the age of onset of AMN symptoms in male as well as in female patients.”
Quote in the paperSubstantial claim - Premisecitation
Altered expression of ACSBG1 and ABCD4 mRNA was observed in normal appearing white matter of CALD patients.
“an altered expression of ACSBG1 and ABCD4 mRNA was observed in normal appearing white matter of CALD patients.115”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [115] Asheuer M Bieche I Laurendeau I Decreased expression of ABCD4 and BG1 genes early in the pathogenesis of X-linked adrenoleukodystrophy Hum Mol Genet 2005 14 10 1293 1303 15800013 source
- May combine two claims. 27
- Classified as probably not a substantial claim. 13
May combine two claims.
PremisereasoningNo curative therapy is currently available for AMN, and treatment is limited to symptomatic therapy of adrenal or gonadal insufficiency, neuropathic pain, and spasticity.
“Thus, no curative therapy is currently available for AMN, and treatment is limited to symptomatic therapy of adrenal or gonadal insufficiency, neuropathic pain, and spasticity.2”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [2] Engelen M Kemp S de Visser M X-linked adrenoleukodystrophy (X-ALD): clinical presentation and guidelines for diagnosis, follow-up and management Orphanet J Rare Dis 2012 7 51 22889154 PMC3503704 source
The Clinical management section (page unavailable in our copy) says there is no effective disease-modifying therapy for AMN and that follow-up mainly provides symptomatic treatment. It specifies steroid replacement for adrenal insufficiency and medication for spasticity; the Women with X-ALD subsection also recommends treating neuropathic pain as for men with AMN. The copy notes testicular insufficiency in AMN but does not describe treatment for it, so the gonadal-treatment detail is not supported. (LLM, conf=0.85)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationCALD usually only affects males and presents with rapidly progressive inflammatory demyelination in the brain, leading to rapid cognitive and neurological decline.
“In contrast, CALD usually only affects males and presents with rapidly progressive inflammatory demyelination in the brain, leading to rapid cognitive and neurological decline.3,4”
Quote in the paperNot a substantial claim1 of 2 sources checked- cites [3] Moser HW Smith KD Watkins PA Powers J Moser AB X-linked adrenoleukodystrophy Scriver R Beaudet AL Sly WS Valle D The Metabolic and Molecular Bases of Inherited Disease 8th ed New York, NY, USA McGraw-Hill Book Co 2001
Not checked in the free run.
- cites [4] Berger J Forss-Petter S Eichler FS Pathophysiology of X-linked adrenoleukodystrophy Biochimie 2014 98 135 142 24316281 PMC3988840 source
The Introduction and clinical aspects section describes CALD as rapidly progressive inflammatory cerebral demyelination in male patients, accompanied by progressive neurological decline; it also says cerebral disease in females is exceedingly rare. The cited passages do not specifically report cognitive decline (searched: “cognitive”), so that part of the claim is not established by our copy. Page numbers were not available. (LLM, conf=0.85)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationA high number, if not all, heterozygous females develop at least some symptoms of AMN, and the severity of symptoms increases with age.
“During recent more detailed studies, it became apparent that a high number, if not all, of the heterozygous females develop at least some symptoms of AMN and that the severity of symptoms increases with age.12,24,89”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites [12] Engelen M Barbier M Dijkstra IM X-linked adrenoleukodystrophy in women: a cross-sectional cohort study Brain 2014 137 Pt 3 693 706 24480483 source
- cites [24] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Age-dependent penetrance among females with X-linked adrenoleukodystrophy Brain 2015 138 Pt 2 e325 25149409 source
- cites [89] Habekost CT Schestatsky P Torres VF Neurological impairment among heterozygote women for X-linked adrenoleukodystrophy: a case control study on a clinical, neurophysiological and biochemical characteristics Orphanet J Rare Dis 2014 9 1 6 24410807 PMC3896743 source
May combine two claims.
PremisecitationAll cases of translation initiation mutations in ABCD1 reported to date have presented with the AMN phenotype and none with CALD.
“Indeed, all cases of translation initiation mutations in ABCD1 reported to date have presented with the AMN phenotype and none with CALD.35,79,80”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites [35] O’Neill GN Aoki M Brown RH Jr ABCD1 translation-initiator mutation demonstrates genotype-phenotype correlation for AMN Neurology 2001 57 11 1956 1962 11739809 source
- cites [79] Engelen M van der Kooi AJ Kemp S X-linked adrenomyeloneuropathy due to a novel missense mutation in the ABCD1 start codon presenting as demyelinating neuropathy J Peripher Nerv Syst 2011 16 4 353 355 22176151 source
- cites [80] Vachalova I Chandoga J Petrovic R Copikova-Cudrakova D Sykora M Traubner P Adrenoleukodystrophy – a new mutation identified Bratisl Lek Listy 2007 108 10–11 462 466 18306728 source
The Discussion describes one patient with an ABCD1 initiation-codon mutation whose presentation was consistent with AMN. It does not establish that all reported initiation mutations presented as AMN or that none presented as CALD; it also notes possible early cerebral involvement in this patient. Page numbers are unavailable in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measured
May combine two claims.
InterpretationcitationDetermination of C26:0-LPC will also identify the majority of female X-ALD carriers as well as patients affected by different peroxisomal biogenesis disorders or single enzyme deficiencies of the peroxisomal beta-oxidation pathway.
“In addition to the detection of male X-ALD patients, determination of C26:0-LPC will also identify the majority of female X-ALD carriers as well as patients affected by different peroxisomal biogenesis disorders or single enzyme deficiencies of the peroxisomal beta-oxidation pathway.72,74”
Quote in the paperSubstantial claim1 of 2 sources checked- cites [72] Theda C Gibbons K Defor TE Newborn screening for X-linked adrenoleukodystrophy: further evidence high throughput screening is feasible Mol Genet Metab 2014 111 1 55 57 24268529 PMC3935823 source
The Discussion (page unavailable) says screening may identify female heterozygotes and that positive results can reflect peroxisomal biogenesis disorders. It expects only a portion of female heterozygotes to be identified, however, not necessarily a majority. The Introduction mentions single-enzyme defects but does not establish that this test identifies patients with them. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [74] Vogel BH Bradley SE Adams DJ Newborn screening for X-linked adrenoleukodystrophy in New York State: Diagnostic protocol, surveillance protocol and treatment guidelines Mol Genet Metab 2 12 2015 Epub ahead of print 25724074 source
May combine two claims.
PremisecitationThe fatal cerebral phenotype of X-ALD is extremely rare in females and probably only occurs when both alleles are affected.
“Indeed, the fatal cerebral phenotype of the disease is extremely rare in females and probably only occurs when both alleles are affected.4,87,88”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites [4] Berger J Forss-Petter S Eichler FS Pathophysiology of X-linked adrenoleukodystrophy Biochimie 2014 98 135 142 24316281 PMC3988840 source
- cites [87] Hershkovitz E Narkis G Shorer Z Cerebral X-linked adrenoleukodystrophy in a girl with Xq27-Ter deletion Ann Neurol 2002 52 2 234 237 12210797 source
- cites [88] Chen X Chen Z Huang D Liu X Gui Q Yu S Adult cerebral adrenoleukodystrophy and Addison’s disease in a female carrier Gene 2014 544 2 248 251 24768737 source
May combine two claims.
PremisecitationDifferent substrate preferences were suggested for ABCD1-3: straight-chain VLCFAs for ABCD1, unsaturated VLCFAs for ABCD2, and branched-chain fatty acids, dicarboxylic acids, and bile acid precursors for ABCD3.
“Different substrate preferences were suggested for ABCD1-3: straight-chain VLCFAs for ABCD1, unsaturated VLCFAs for ABCD2, and branched-chain fatty acids, dicarboxylic acids, and bile acid precursors for ABCD3.122–124”
Quote in the paperSubstantial claim2 of 3 sources checked- cites [122] Genin EC Geillon F Gondcaille C Substrate specificity overlap and interaction between adrenoleukodystrophy protein (ALDP/ABCD1) and adrenoleukodystrophy-related protein (ALDRP/ABCD2) J Biol Chem 2011 286 10 8075 8084 21209459 PMC3048694 source
The Discussion (page unavailable) describes a preference for saturated VLCFAs in ABCD1 and polyunsaturated fatty acids in ABCD2, while emphasizing that their substrate specificities overlap. The passage labeled Abstract (page unavailable) suggests that ABCD3 preferentially transports branched-chain fatty acids and bile acid precursors. Our copy does not support the additional attribution of dicarboxylic acids to ABCD3. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [123] van Roermund CW Ijlst L Wagemans T Wanders RJ Waterham HR A role for the human peroxisomal half-transporter ABCD3 in the oxidation of dicarboxylic acids Biochim Biophys Acta 2014 1841 4 563 568 24333844 source
- cites [124] Ferdinandusse S Jimenez-Sanchez G Koster J A novel bile acid biosynthesis defect due to a deficiency of peroxisomal ABCD3 Hum Mol Genet 2015 24 2 361 370 25168382 source
The supplied passages contain no match for the claim. Searches of our copy for ABCD1, ABCD2, ABCD3, dicarboxylic acids, and substrate specificity returned no passages, so I cannot verify the proposed substrate preferences from this source. (LLM, conf=0.65)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
InterpretationcitationA further explanation for the lack of compensation in vivo may be different affinities toward VLCFAs.
“A further explanation for the lack of compensation in vivo may be different affinities toward VLCFAs.”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites [122] Genin EC Geillon F Gondcaille C Substrate specificity overlap and interaction between adrenoleukodystrophy protein (ALDP/ABCD1) and adrenoleukodystrophy-related protein (ALDRP/ABCD2) J Biol Chem 2011 286 10 8075 8084 21209459 PMC3048694 source
The Discussion (page unavailable) describes different substrate preferences for ALDP and ALDRP, which supports the possibility of a functional difference toward VLCFAs. But it says there are no clear data on differences in affinity toward C24:0 and C26:0, and it does not establish affinity differences as an explanation for the lack of compensation in vivo. (LLM, conf=0.82)
Experimental — accuracy not yet measured - cites [123] van Roermund CW Ijlst L Wagemans T Wanders RJ Waterham HR A role for the human peroxisomal half-transporter ABCD3 in the oxidation of dicarboxylic acids Biochim Biophys Acta 2014 1841 4 563 568 24333844 source
- cites [124] Ferdinandusse S Jimenez-Sanchez G Koster J A novel bile acid biosynthesis defect due to a deficiency of peroxisomal ABCD3 Hum Mol Genet 2015 24 2 361 370 25168382 source
No passage from our indexed copy addresses whether different affinities for very-long-chain fatty acids could explain a lack of compensation in vivo. Searches for the claim’s wording, VLCFA, affinity, and compensation found no relevant passage. (LLM, conf=0.70)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataThe average incidence rates for X-ALD in male patients are between 1:20,000 and 1:30,000.
“In summary, the data given in Table 1 suggest the average incidence rates for X-ALD in male patients to be between 1:20,000 and 1:30,000.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Findingnone givenTo date, 695 non-recurrent mutations have been described in the X-ALD database, out of which 343 represent missense mutations.
“To date, 695 non-recurrent mutations have been described in the X-ALD database, out of which 343 represent missense mutations.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Premisenone givenX-ALD presents with heterogeneous phenotypes ranging from adrenomyeloneuropathy (AMN) to inflammatory demyelinating cerebral ALD (CALD).
“X-ALD presents with heterogeneous phenotypes ranging from adrenomyeloneuropathy (AMN) to inflammatory demyelinating cerebral ALD (CALD).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationHorn et al. found a combined incidence rate of 1:61,000 for males plus females in the Norwegian population.
“Further, the study of Horn et al for the first time also directly addressed the number of affected females and found a combined incidence rate of 1:61,000 for males plus females in the Norwegian population.14”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [14] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Adrenoleukodystrophy in Norway: high rate of de novo mutations and age-dependent penetrance Pediatr Neurol 2013 48 3 212 219 23419472 source
- The authors state this as an assumption: Some underestimation must be assumed in the Norwegian study of Horn et al.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisenone givenAMN is characterized by a slowly progressive axonopathy with first symptoms in males usually between 20 and 30 years of age and in affected females with an average onset between 40 and 50 years.
“AMN is characterized by a slowly progressive axonopathy and first symptoms in males usually appear between 20 and 30 years of age, while affected females may develop some symptoms of AMN with an average onset between 40 and 50 years.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationAMN has near 100% lifetime penetrance; all male and possibly most female patients will develop at least some symptoms of AMN late in life.
“It was recently reported that all male and possibly even most female patients will develop at least some symptoms of AMN late in life and thus AMN has a near 100% lifetime penetrance.12,14,23”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [12] Engelen M Barbier M Dijkstra IM X-linked adrenoleukodystrophy in women: a cross-sectional cohort study Brain 2014 137 Pt 3 693 706 24480483 source
- cites [14] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Adrenoleukodystrophy in Norway: high rate of de novo mutations and age-dependent penetrance Pediatr Neurol 2013 48 3 212 219 23419472 source
- cites [23] Engelen M Kemp S Poll-The BT X-linked adrenoleukodystrophy: pathogenesis and treatment Curr Neurol Neurosci Rep 2014 14 10 486 25115486 source
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenThe peak occurrence of CALD is between 5 and 12 years of age.
“While the lifetime risk for male X-ALD patients to develop CALD is estimated to be at least 60%, the peak occurrence is between 5 and 12 years of age.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationX-linked adrenoleukodystrophy (X-ALD) is a monogenic disease caused by mutations in the ABCD1 gene located on Xq28.
“X-linked adrenoleukodystrophy (X-ALD) is a monogenic disease caused by mutations in the ABCD1 gene located on Xq28.1”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [1] Mosser J Douar AM Sarde CO Putative X-linked adrenoleukodystrophy gene shares unexpected homology with ABC transporters Nature 1993 361 6414 726 730 8441467 source
May combine two claims.
PremisereasoningX-ALD is a monogenic, X-linked disorder, and the risk of affected parents transmitting the affected allele can be clearly predicted.
“X-ALD is a monogenic, X-linked disorder and the risk of affected parents for transmitting the affected allele can be clearly predicted.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationBezman et al. reported a combined incidence rate of 1:16,800, an extrapolation based on male incidence rates that includes unidentified and unaffected female carriers.
“In contrast, the combined incidence rate of 1:16,800 reported by the thorough study of Bezman et al represents an extrapolation based on male incidence rates and therefore also includes unidentified and unaffected female carriers.17”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [17] Bezman L Moser AB Raymond GV Adrenoleukodystrophy: incidence, new mutation rate, and results of extended family screening Ann Neurol 2001 49 4 512 517 11310629 source
May combine two claims.
PremisecitationMeasurement of total C26:0 is highly specific in male patients, but VLCFA measurement detects only about 85% of heterozygous female carriers.
“While the measurement of total C26:0 is highly specific in male patients, measurement of VLCFAs can only detect about 85% of heterozygous female carriers.13”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [13] Moser AB Kreiter N Bezman L Plasma very long chain fatty acids in 3,000 peroxisome disease patients and 29,000 controls Ann Neurol 1999 45 1 100 110 9894883 source
May combine two claims.
InterpretationreasoningAn elevated level of VLCFAs is the standard biomarker for diagnosis of X-ALD but does not predict phenotype or progression of disease.
“Thus, an elevated level of VLCFAs represents the standard biomarker for diagnosis of X-ALD, but does not predict the phenotype or progression of disease.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationIn a prospective cross-sectional cohort of 46 heterozygous X-ALD females, 18% of women under age 40 had symptoms, while 88% in the age group 60 years or older were symptomatic.
“A recent prospective cross-sectional cohort study including 46 heterozygous X-ALD females reported that 18% of women under the age of 40 years had symptoms but in the age group 60 years or older, 88% were symptomatic.12”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [12] Engelen M Barbier M Dijkstra IM X-linked adrenoleukodystrophy in women: a cross-sectional cohort study Brain 2014 137 Pt 3 693 706 24480483 source
May combine two claims.
Interpretationnone givenThe ABCD1 mutation is necessary but not sufficient for CALD; additional genetic or environmental factors are required to trigger brain inflammation.
“The mutation in ABCD1 is necessary but not sufficient for CALD to occur, as additional genetic or environmental factors are required to trigger this devastating brain inflammation.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationThe majority of male X-ALD patients develops primary adrenocortical insufficiency (Addison's disease), which can be the first and often sole symptom in young male X-ALD patients.
“The majority of male X-ALD patients develops primary adrenocortical insufficiency (Addison’s disease) which can be the first and often sole symptom in young male X-ALD patients.30”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [30] Dubey P Raymond GV Moser AB Kharkar S Bezman L Moser HW Adrenal insufficiency in asymptomatic adrenoleukodystrophy patients identified by very long-chain fatty acid screening J Pediatr 2005 146 4 528 532 15812458 source
May combine two claims.
Premisenone givenThe risk of developing the inflammatory form of X-ALD between 5 and 12 years of age is around 35%-40% and decreases during adulthood.
“The risk of developing the inflammatory form of X-ALD between 5 and 12 years of age is around 35%–40% and decreases during adulthood.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenThe lifetime risk for male X-ALD patients to develop CALD is estimated to be at least 60%.
“While the lifetime risk for male X-ALD patients to develop CALD is estimated to be at least 60%, the peak occurrence is between 5 and 12 years of age.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationPrevalence rates of around 1:200,000 for males and 1:100,000 for females were estimated for the Dutch and Norwegian populations.
“In addition to incidence rates, prevalence rates of around 1:200,000 for males and 1:100,000 for females were estimated by thorough investigations carried out for the Dutch and the Norwegian populations.14,21”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [14] Horn MA Retterstol L Abdelnoor M Skjeldal OH Tallaksen CM Adrenoleukodystrophy in Norway: high rate of de novo mutations and age-dependent penetrance Pediatr Neurol 2013 48 3 212 219 23419472 source
- cites [21] van Geel BM Assies J Weverling GJ Barth PG Predominance of the adrenomyeloneuropathy phenotype of X-linked adrenoleukodystrophy in The Netherlands: a survey of 30 kindreds Neurology 1994 44 12 2343 2346 7991123 source
May combine two claims.
PremisereasoningSons of males with X-ALD will never inherit the affected X chromosome from their father, while their daughters will automatically be carriers of the disease allele.
“While sons of males with X-ALD will never inherit the affected X chromosome from their father, their daughters will automatically be carriers of the disease allele.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationThe mutation c.1823 G>A in exon 8 of ABCD1 was previously shown to cause X-ALD, as it was found in the ABCD1 coding sequence in different patients.
“However, in a previous study, this mutation was clearly shown to cause X-ALD, as it was found in the ABCD1 coding sequence in different patients.53”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [53] Dvorakova L Storkanova G Unterrainer G Eight novel ABCD1 gene mutations and three polymorphisms in patients with X-linked adrenoleukodystrophy: the first polymorphism causing an amino acid exchange Hum Mutat 2001 18 1 52 60 11438993 source
May combine two claims.
PremisecitationThe ABCD1 pseudogenes consist of exons 7-10 of the ABCD1 gene and are derived from one ancestral duplication, probably to chromosome 2, followed by further duplications.
“These all consist of exons 7–10 of the ABCD1 gene and are derived from one ancestral duplication, probably to chromosome 2, which was followed by further duplications in a process termed pericentromeric plasticity.47”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [47] Eichler EE Budarf ML Rocchi M Interchromosomal duplications of the adrenoleukodystrophy locus: a phenomenon of pericentromeric plasticity Hum Mol Genet 1997 6 7 991 1002 9215666 source
May combine two claims.
PremisereasoningContradictory results concerning skewed X-inactivation have been reported, possibly due to inadequate neurological characterization and consideration of patient age.
“However, contradictory results concerning skewed X-inactivation have been reported, possibly due to inadequate neurological characterization and consideration of the age of the patients.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationThe majority of female carriers have elevated plasma VLCFA levels, although to a lesser extent than male patients, and the rate of beta-oxidation of VLCFAs is decreased in fibroblasts.
“However, the majority of female carriers have elevated plasma VLCFA levels, although to a lesser extent than male patients, and the rate of beta-oxidation of VLCFAs was found to be decreased in fibroblasts.12”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [12] Engelen M Barbier M Dijkstra IM X-linked adrenoleukodystrophy in women: a cross-sectional cohort study Brain 2014 137 Pt 3 693 706 24480483 source
May combine two claims.
PremisecitationAmino acids 694-745 are not necessary for ABCD1 function, as truncated ABCD1 1-693 restored beta-oxidation of VLCFAs in X-ALD fibroblasts.
“This idea is further supported by the finding that amino acids 694–745 are not necessary for ABCD1 function, as truncated ABCD11–693 was also able to restore beta-oxidation of VLCFAs in X-ALD fibroblasts.31”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31] Smith KD Kemp S Braiterman LT X-linked adrenoleukodystrophy: genes, mutations, and phenotypes Neurochem Res 1999 24 4 521 535 10227685 source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationSince the beginning of 2014, X-ALD is included in the New York State newborn screening program.
“Indeed, since the beginning of 2014, X-ALD is included in the New York State newborn screening program,74”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [74] Vogel BH Bradley SE Adams DJ Newborn screening for X-linked adrenoleukodystrophy in New York State: Diagnostic protocol, surveillance protocol and treatment guidelines Mol Genet Metab 2 12 2015 Epub ahead of print 25724074 source
May combine two claims.
InterpretationreasoningNo disease-causing mutations have been found after amino acid position 693, although evolutionary conservation remains high up to position 721, suggesting this region of ABCD1 is not directly involved in substrate transport.
“Interestingly, no disease-causing mutations have been found after amino acid position 693, although evolutionary conservation remains high up to position 721, suggesting that this region of ABCD1 is not directly involved in substrate transport.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
InterpretationcitationThis raises the possibility of different substrate preferences for such putative heterodimers.
“As chimeric heterodimers of ABCD1 and ABCD2 were shown in vitro to be functional, this would raise the possibility of different substrate preferences for such putative heterodimers.126”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
InterpretationreasoningIndependently of the genetic background, every male X-ALD patient might be at risk of developing the inflammatory form of the disease in response to environmental factors.
“Thus, it is possible that independently of the genetic background, every male X-ALD patient might be at risk of developing the inflammatory form of the disease in response to environmental factors, but the likelihood for this to occur may depend on specific genetic modifiers.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S4 (based). May combine two claims.
Interpretationnone givenThe implementation of newborn screening for X-ALD will ensure that boys affected by X-ALD will not remain undiagnosed, and thus their chance to receive HSCT at an appropriate time will increase.
“The implementation of newborn screening for X-ALD will ensure that boys affected by X-ALD will not remain undiagnosed, and thus their chance to receive HSCT at an appropriate time will increase.”
Quote in the paperNot a substantial claim
The authors state this as an assumption.
Some underestimation must be assumed in the Norwegian study of Horn et al.
“However, some underestimation must be assumed in this study.”
The authors state this as an assumption.
X-ALD patients without cerebral involvement at 45 years can be considered cases of “pure AMN”.
“As the likelihood for initiation of brain inflammation strongly diminishes with age, X-ALD patients without cerebral involvement at 45 years were considered as cases of “pure AMN””
The paper relies on this without support.
The likelihood for initiation of brain inflammation strongly diminishes with age.
“As the likelihood for initiation of brain inflammation strongly diminishes with age, X-ALD patients without cerebral involvement at 45 years were considered as cases of “pure AMN””
The paper relies on this without support.
The ABCD family of transporters needs to form dimers in order to be functional.
“Furthermore, the ABCD family of transporters needs to form dimers in order to be functional.”
The paper relies on this without support.
X-ALD is a monogenic disorder.
“Although X-ALD is a monogenic disorder, the individual genetic background, involving many different genes, may be responsible for the age of onset of AMN symptoms in male as well as in female patients.”
The paper relies on this without support.
Severe head trauma can elicit rapidly progressive brain inflammation in adult X-ALD patients.
“For example, it has been reported that severe head trauma can elicit the rapidly progressive brain inflammation in adult patients.”
The paper relies on this without support.
ABCD2 and ABCD3 are located in the peroxisomal membrane.
“In addition to ABCD1, its two closest homologs, ABCD2 (ALDRP) and ABCD3 (PMP70), are also located in the peroxisomal membrane.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
VLCFA are elevated in all male X-ALD patients regardless of age, disease duration, metabolic status, or clinical symptoms.
“VLCFA are elevated in all male X-ALD patients regardless of age, disease duration, metabolic status, or clinical symptoms15.”
From Defining diagnostic cutoffs in neurological patients for serum very long chain fatty acids (VLCFA) in genetically confirmed X-Adrenoleukodystrophy (2020) · cites this paper as [15]
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Adrenoleukodystrophy—Neuroendocrine pathogenesis and redefinition of natural history
Kemp, S., Huffnagel, I. C., Linthorst, G. E., Wanders, R. J., & Engelen, M. (2016) · Nature Reviews Endocrinology · doi:10.1038/nrendo.2016.90 · Cited by 275 · see citing works
Peroxisomes in brain development and function
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Impaired plasticity of macrophages in X-linked adrenoleukodystrophy
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Self-citation
- Authors
- Berger, J., Wiesinger, C., & Eichler, F.
- Affiliations
- Medical University of Vienna (AT)
- Harvard University (US)
- Venue
- The Application of Clinical Genetics
- Publisher
- Informa UK Limited
- Published
- 2015-05
- Volume
- 8
- Pages
- 109
- ISSN
- 1178-704X (ISSN-L)
- PMC
- PMC4427263
- OpenAlex
- W1891483234
- Cited by
- 140
- References
- 137
- Citations by year
- 2026: 6 · 2025: 7 · 2024: 14 · 2023: 9 · 2022: 16 · 2021: 25 · 2020: 11 · 2019: 17 · 2018: 11 · 2017: 12 · 2016: 10 · 2015: 2
- FWCI
- 7.65
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- The Application of Clinical Genetics (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- PubMed Central (submittedVersion, cc-by-nc)
- Digital Access to Scholarship at Harvard (DASH) (Harvard University) (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Dove Medical Press (Taylor and Francis Group) (submittedVersion, cc-by-nc)
- Funders
- Forskningsrådet i Sydöstra Sverige
- Austrian Science Fund (P26112-B19,)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Metabolism and Genetic Disorders
- Health Sciences › Medicine › Physiology › Lysosomal Storage Disorders Research
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Hereditary Neurological Disorders
- Keywords
- X-linked adrenoleukodystrophy, ABCD1 gene, peroxisomal ABC transporters, heredity (biology), ABCD1 mutations, genotype-phenotype correlation, genetic modifiers, adrenomyeloneuropathy, cerebral adrenoleukodystrophy, disease incidence, prenatal diagnosis, very long chain fatty acids, lysophosphatidylcholine, newborn screening, peroxisomal disorders
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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