Collagen-related genes influence the glaucoma risk factor, central corneal thickness
Abstract
Central corneal thickness (CCT) is a risk factor of glaucoma, the most common cause of irreversible blindness worldwide. The identification of genetic determinants affecting CCT in the normal population will provide insights into the mechanisms underlying the association between CCT and glaucoma, as well as the pathogenesis of glaucoma itself. We conducted two genome-wide association studies for CCT in 5080 individuals drawn from two ethnic populations in Singapore (2538 Indian and 2542 Malays) and identified novel genetic loci significantly associated with CCT (COL8A2 rs96067, p(meta) = 5.40 × 10⁻¹³, interval of RXRA-COL5A1 rs1536478, p(meta) = 3.05 × 10⁻⁹). We confirmed the involvement of a previously reported gene for CCT and brittle cornea syndrome (ZNF469) [rs9938149 (p(meta) = 1.63 × 10⁻¹⁶) and rs12447690 (p(meta) = 1.92 × 10⁻¹⁴)]. Evidence of association exceeding the formal threshold for genome-wide significance was observed at rs7044529, an SNP located within COL5A1 when data from this study (n = 5080, P = 0.0012) were considered together with all published data (reflecting an additional 7349 individuals, p(Fisher) = 1.5 × 10⁻⁹). These findings implicate the involvement of collagen genes influencing CCT and thus, possibly the pathogenesis of glaucoma.
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Expression profiling studies suggest that both PRDM5 and ZNF469 might be part of a common pathway regulating the expression of ECM genes such as fibrillary collagens, and several studies have suggested a role for ZNF469 in normal corneal development.
“In addition, expression profiling studies suggest that both PRDM5 and ZNF469 might be part of a common pathway regulating the expression of ECM genes such as fibrillary collagens, and several studies have suggested a role for ZNF469 normal corneal development [Lu et al., 2010;Vitart et al., 2010;Vithana et al., 2011;Rohrbach et al., 2013].”
From The Ehlers–Danlos syndromes, rare types (2017) · cites this paper as Vithana et al., 2011
Genome-wide association studies have consistently associated single nucleotide polymorphisms (SNPs) in the vicinity of the ZNF469 locus with central corneal thickness (CCT).
“Genome-wide association studies have consistently associated single nucleotide polymorphisms (SNPs) in the vicinity of the ZNF469 locus with central corneal thickness (CTT) [Lu et al., 2010;Vitart et al., 2010;Vithana et al., 2011;Hoehn et al., 2012;Ulmer et al., 2012]”
From The Ehlers–Danlos syndromes, rare types (2017) · cites this paper as Vithana et al., 2011
Cites
Deleterious Mutations in the Zinc-Finger 469 Gene Cause Brittle Cornea Syndrome
Abu, A., Frydman, M., Marek, D., Pras, E., Nir, U., Reznik-Wolf, H., & Pras, E. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.04.001 · Cited by 139 · see citing works
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The Ehlers–Danlos syndromes, rare types
Brady, A. F., Demirdas, S., Fournel‐Gigleux, S., Ghali, N., Giunta, C., Kapferer‐Seebacher, I., Kosho, T., Mendoza‐Londono, R., Pope, M. F., Rohrbach, M., et al. (2017) · American Journal of Medical Genetics Part C Seminars in Medical Genetics · doi:10.1002/ajmg.c.31550 · Cited by 249 · see citing works
Burkitt Wright, E. M. M., Spencer, H. L., Daly, S. B., Manson, F. D. C., Zeef, L. A. H., Urquhart, J., Zoppi, N., Bonshek, R., Tosounidis, I., Mohan, M., et al. (2011) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2011.05.007 · Cited by 135 · see citing works
Genetics of the Ehlers–Danlos syndrome: More than collagen disorders
Van Damme, T., Syx, D., Coucke, P., Symoens, S., De Paepe, A., & Malfait, F. (2015) · Expert Opinion on Orphan Drugs · doi:10.1517/21678707.2015.1022528 · Cited by 4 · see citing works
- Authors
- Vithana, E. N., Aung, T., Khor, C. C., Cornes, B. K., Tay, W.-T., Sim, X., Lavanya, R., Wu, R., Zheng, Y., Hibberd, M. L., Chia, K. S., Seielstad, M., Goh, L. K., Saw, S.-M., Shyong Tai, E., & Wong, T. Y.
- Affiliations
- Singapore Eye Research Institute (SG)
- Singapore National Eye Center (SG)
- Agency for Science, Technology and Research (SG)
- National University of Singapore (SG)
- University of California, San Francisco (US)
- The University of Melbourne (AU)
- Corresponding author
- Vithana, Eranga N.
- ORCID
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 2010-11-23
- Volume
- 20
- Issue
- 4
- Pages
- 649-658
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2137168556
- Cited by
- 153
- References
- 1
- Citations by year
- 2025: 3 · 2024: 6 · 2023: 1 · 2022: 5 · 2021: 11 · 2020: 9 · 2019: 10 · 2018: 10 · 2017: 16 · 2016: 10 · 2015: 15 · 2014: 13 · 2013: 16 · 2012: 15
- FWCI
- 2.01
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- National University of Singapore (submittedVersion)
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Corneal surgery and disorders
- Health Sciences › Medicine › Ophthalmology › Glaucoma and retinal disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Keywords
- central corneal thickness, glaucoma, collagen genes, COL8A2, COL5A1, retinoid X receptor alpha, ZNF469, brittle cornea syndrome, genetic susceptibility, genome-wide association study, Singapore
- MeSH terms
- Adult, Aged, Aged, 80 and over, Collagen, Cornea, Female, Glaucoma, Humans, Malaysia, Male, Middle Aged, Risk Factors, Singapore, Cohort Studies, Polymorphism, Single Nucleotide, Collagen Type VIII, Quantitative Trait Loci, Asian People, Genome-Wide Association Study
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