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GENECLASS2: A Software for Genetic Assignment and First-Generation Migrant Detection
Open accessAbstract
GENECLASS2 is a software that computes various genetic assignment criteria to assign or exclude reference populations as the origin of diploid or haploid individuals, as well as of groups of individuals, on the basis of multilocus genotype data. In addition to traditional assignment aims, the program allows the specific task of first-generation migrant detection. It includes several Monte Carlo resampling algorithms that compute for each individual its probability of belonging to each reference population or to be a resident (i.e., not a first-generation migrant) in the population where it was sampled. A user-friendly interface facilitates the treatment of large datasets.
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Cited by
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Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges
HELYAR, S. J., HEMMER‐HANSEN, J., BEKKEVOLD, D., TAYLOR, M. I., OGDEN, R., LIMBORG, M. T., CARIANI, A., MAES, G. E., DIOPERE, E., CARVALHO, G. R., et al. (2011) · Molecular Ecology Resources · doi:10.1111/j.1755-0998.2010.02943.x · Cited by 478
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UNDERWOOD, J. N., SMITH, L. D., VAN OPPEN, M. J. H., & GILMOUR, J. P. (2007) · Molecular Ecology · doi:10.1111/j.1365-294x.2006.03187.x · Cited by 231
Metadata
- Authors
- Piry, S., Alapetite, A., Cornuet, J.-M., Paetkau, D., Baudouin, L., & Estoup, A.
- Venue
- Journal of Heredity
- Publisher
- Oxford University Press (OUP)
- Published
- 2004-11-01
- Volume
- 95
- Issue
- 6
- Pages
- 536-539
- ISSN
- 0022-1503 (ISSN-L)
- 1465-7333
- OpenAlex
- W2149799970
- Cited by
- 2,508
- References
- 0
- FWCI
- 41.76
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Piry, S., Alapetite, A., Cornuet, J.-M., Paetkau, D., Baudouin, L., & Estoup, A. (2004). GENECLASS2: A Software for Genetic Assignment and First-Generation Migrant Detection. Journal of Heredity. https://doi.org/10.1093/jhered/esh074
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