A General Comparison of Relaxed Molecular Clock Models
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- Inaccurate fossil placement does not compromise tip-dated divergence timesNicolás Mongiardino Koch, Russell J. Garwood, Luke A. Parry · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
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- Species-level diversity dynamics during the Great Ordovician biodiversification event: a phylodynamic case study of Laurentian brachiopod lineagesAlycia L. Stigall, David F. Wright, Shaolin Meliora Censullo · 2026 · Palaeogeography Palaeoclimatology Palaeoecology
- Coalescent theory and species treesZiheng Yang · 2014 · Oxford University Press eBooks
- Locating uncertainty in stochastic evolutionary models: divergence time estimationCharles H. Pence · 2019 · Biology & Philosophy
- Rooting Gene Trees via Phylogenetic NetworksJerzy Tiuryn, Natalia Rutecka, Paweł Górecki · 2022 · Lecture notes in computer science
- Phylogenetic network-assisted rooting of unrooted gene treesJerzy Tiuryn, Natalia Rutecka, Paweł Górecki · 2024 · Journal of Combinatorial Optimization
- An implementation of the Brownian motion model for Bayesian phylogenetic inference using continuous traits with missing statesZiye Wang, Chi Zhang · 2025 · Paleobiology
- Supergene validation: A model-based protocol for assessing the accuracy of non-model-based supergene methodsRichard H. Jr. Adams, Todd A. Castoe · 2019 · MethodsX
- Molecules, Morphology, Fossils and the Origination and Extinction Dynamics of Scleractinian CoralsMarcos S. Barbeitos · 2011 · The Paleontological Society Papers
- Environmental factors affect the evolution of linguistic subgroups in BorneoAlexander D. Smith, Taraka Rama · 2022 · Diachronica
- 亚洲古近纪哺乳动物群交流及其反映的古地理格局喜军 倪, 强 李, 驰 张, Khizar Samiullah, 立民 张, 阳河山 杨, 文心 曹 · 2019 · SCIENTIA SINICA Terrae
- INACCURATE FOSSIL PLACEMENT DOES NOT COMPROMISE TIP-DATED DIVERGENCE TIMESUC San Diego, Nicolás Mongiardino Koch, Russell J. Garwood, Russell J. Garwood, Luke A. Parry, Luke A. Parry · 2022 · Abstracts with programs - Geological Society of America
- Phylogenetic utility of mitochondrial and nuclear genes: a case study in the diptera (true flies)Jason Caravas · 2012 · Human Biology
- Evolution of marsupial biodiversityManuela Cascini · 2020 · Queensland University of Technology
- Maximum likelihood methodsZiheng Yang · 2014 · Oxford University Press eBooks
- Timing the Evolution of Phosphorus-Cycling Enzymes Through Geological TimeJoanne Sarah Boden, Juntao Zhong, Rika E. Anderson, Eva E. Stüeken · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Impact of Partition Models on Phylogenetic Inference and Divergence Times of Lampyridae from Mitochondrial GenomesSebastian Höhna, Haoqing Du, Ana Catalán · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Filogeografia ssaków w europie - koncepcja badań i wybrane zagadnieniaJoanna Stojak · 2014
- The Molecular ClockAlan R. Rogers · 2013 · Elsevier eBooks
- Time Calibration of Linguistic Phylograms: A Molecular Clock for Historical Linguistics2015 · Journal of Phylogenetics & Evolutionary Biology
- THE PROTISTAN ORIGINS OF MULTICELLUARITY: TIMING AND EVOLUTION OF CELL ADHESION MOLECULESSusan C. Sharpe · 2015 · DalSpace (Dalhousie University)
- Understanding the importance of taxonomic sampling for large-scale phylogenetic analyses by simulating evolutionary processes under complex modelsTracy A. Heath · 2008 · Texas ScholarWorks (Texas Digital Library)
- Bayesian computation (MCMC)Ziheng Yang · 2014 · Oxford University Press eBooks
- Comparison of phylogenetic methods and tests on treesZiheng Yang · 2014 · Oxford University Press eBooks
- Probabilistic Modelling of Domain and Gene EvolutionSayyed Auwn Muhammad · 2016 · KTH Publication Database DiVA (KTH Royal Institute of Technology)
- Genetic and evolutionary perspectives on genogroup III, genotype 2 bovine norovirusesSpringer-Verlag Wien · 2014
- Análise e anotação do genoma de Epicoccum nigrum e metabolismo secundário.Almir José Ferreira · 2016 · Digital Library of Theses and Dissertations (Universidade de São Paulo)
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- Three tree priors and five datasets: A study of the effect of tree priors in Indo-European phylogeneticsTaraka Rama · 2018 · arXiv (Cornell University)
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- Inference of Infectious Disease Dynamics from Genetic Data via Sequential Monte CarloRichard A. Smith · 2018 · Deep Blue (University of Michigan)
- Peer Review #2 of "Phylogenomic analyses reveal a Gondwanan origin and repeated out of India colonizations into Asia by tarantulas (Araneae: Theraphosidae) (v0.1)"2021 · PeerJ
- Peer Review #1 of "Phylogenomic analyses reveal a Gondwanan origin and repeated out of India colonizations into Asia by tarantulas (Araneae: Theraphosidae) (v0.1)"2021 · PeerJ
- The infinite alleles model revisited: a Gibbs sampling approachMarc Manceau · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Peer Review #2 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.2)"2021 · PeerJ
- Peer Review #1 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.1)"2021 · PeerJ
- Peer Review #2 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.1)"2021 · PeerJ
- Peer Review #1 of "Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system (v0.2)"2021 · PeerJ
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- Peer Review #3 of "Phylogenomic analyses reveal a Gondwanan origin and repeated out of India colonizations into Asia by tarantulas (Araneae: Theraphosidae) (v0.1)"2021 · PeerJ
- References2019 · Wiley eBooks
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- Bayesian theoryZiheng Yang · 2014 · Oxford University Press eBooks
- Peer Review #2 of "Local and relaxed clocks: the best of both worlds (v0.1)"2018 · PeerJ
- AppendicesZiheng Yang · 2014 · Oxford University Press eBooks
- Molecular clock and estimation of species divergence timesZiheng Yang · 2014 · Oxford University Press eBooks
- Bayesian phylogeneticsZiheng Yang · 2014 · Oxford University Press eBooks
- Phylogeny reconstruction: overviewZiheng Yang · 2014 · Oxford University Press eBooks
- Molecular and morphological clocks for estimating evolutionary divergence timesJose Barba‐Montoya, Qiqing Tao, Sudhir Kumar · 2020 · Research Square
- Molecular and morphological clocks for estimating evolutionary divergence timesJose Barba‐Montoya, Qiqing Tao, Sudhir Kumar · 2021 · Research Square
- Peer Review #3 of "Local and relaxed clocks: the best of both worlds (v0.1)"2018 · PeerJ
- Local and relaxed clocks, the best of both worldsMathieu Fourment, Aaron E. Darling · 2018
- References2014 · Elsevier eBooks
- Peer Review #1 of "Local and relaxed clocks: the best of both worlds (v0.1)"2018 · PeerJ
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- Preface2014 · Oxford University Press eBooks
- Copyright Page2014 · Oxford University Press eBooks
- Foreword2014 · Oxford University Press eBooks
- Fossil-calibrated inference of divergence times among the Volvocine algae enables reconstruction of the steps that led to differentiated multicellularityCharles Ross Lindsey, Andrew H. Knoll, Matthew D. Herron, Frank Rosenzweig · 2023 · bioRxiv (Cold Spring Harbor Laboratory)