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Cited by 2,618

The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.

REPuter: the manifold applications of repeat analysis on a genomic scale

Open access
Kurtz, S.·2001·Nucleic Acids Research
DOI 10.1093/nar/29.22.4633
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Abstract

The repetitive structure of genomic DNA holds many secrets to be discovered. A systematic study of repetitive DNA on a genomic or inter-genomic scale requires extensive algorithmic support. The REPuter program described herein was designed to serve as a fundamental tool in such studies. Efficient and complete detection of various types of repeats is provided together with an evaluation of significance and interactive visualization. This article circumscribes the wide scope of repeat analysis using applications in five different areas of sequence analysis: checking fragment assemblies, searching for low copy repeats, finding unique sequences, comparing gene structures and mapping of cDNA/EST sequences.

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Metadata

Authors
Kurtz, S.
Venue
Nucleic Acids Research
Publisher
Oxford University Press (OUP)
Published
2001-11-15
Volume
29
Issue
22
Pages
4633-4642
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
DOI
10.1093/nar/29.22.4633
OpenAlex
W2124281279
Cited by
2,618
References
2
FWCI
7.38
Type
journal article
Language
en
Open access
bronze

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