The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
The EMBL-EBI Job Dispatcher sequence analysis tools framework in 2024
Open accessAbstract
The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions.
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Cites
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Katoh, K., & Standley, D. M. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mst010 · Cited by 46,209
BLAST+: architecture and applications
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., & Madden, T. L. (2009) · BMC Bioinformatics · doi:10.1186/1471-2105-10-421 · Cited by 22,074
UniProt: the Universal Protein Knowledgebase in 2023
The UniProt Consortium, Bateman, A., Martin, M.-J., Orchard, S., Magrane, M., Ahmad, S., Alpi, E., Bowler-Barnett, E. H., Britto, R., Bye-A-Jee, H., et al. (2023) · Nucleic Acids Research · doi:10.1093/nar/gkac1052 · Cited by 7,210
Self-citation
Cited by
Ghosh, S., Das, C. K., Uddin, S., Stripp, S. T., Engelbrecht, V., Winkler, M., Leimkühler, S., Brocks, C., Duan, J., Schäfer, L. V., et al. (2025) · Journal of the American Chemical Society · doi:10.1021/jacs.4c18483 · Cited by 21
Filament formation activates protease and ring nuclease activities of CRISPR Lon-SAVED
Smalakyte, D., Ruksenaite, A., Sasnauskas, G., Tamulaitiene, G., & Tamulaitis, G. (2024) · Molecular Cell · doi:10.1016/j.molcel.2024.09.002 · Cited by 17
Fine-tuning protein language models unlocks the potential of underrepresented viral proteomes
Sawhney, R., Ferrell, B. D., Dejean, T., Schreiber, Z., Harrigan, W., Polson, S. W., Wommack, K. E., & Belcaid, M. (2025) · PeerJ · doi:10.7717/peerj.19919 · Cited by 14
Yilmaz, S. N., Steiner, K., Marksteiner, J., Faserl, K., Villunger, M., Sarg, B., & Humpel, C. (2024) · Biomolecules · doi:10.3390/biom14101326 · Cited by 9
The SH protein of mumps virus is a druggable pentameric viroporin
Devantier, K., Toft-Bertelsen, T. L., Prestel, A., Kjær, V. M. S., Sahin, C., Giulini, M., Louka, S., Spiess, K., Manandhar, A., Qvortrup, K., et al. (2025) · Science Advances · doi:10.1126/sciadv.ads3071 · Cited by 8
Metadata
- Authors
- Madeira, F., Madhusoodanan, N., Lee, J., Eusebi, A., Niewielska, A., Tivey, A. R. N., Lopez, R., & Butcher, S.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2024-04-10
- Volume
- 52
- Issue
- W1
- Pages
- W521-W525
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W4394694796
- Cited by
- 1,723
- References
- 3
- FWCI
- 656.64
- Type
- journal article
- Language
- en
- Open access
- gold
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