Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 1,334

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

AUGUSTUS: a web server for gene finding in eukaryotes

Open access
Stanke, M., Steinkamp, R., Waack, S., Morgenstern, B.·2004·Nucleic Acids Research

Abstract

We present a www server for AUGUSTUS, a novel software program for ab initio gene prediction in eukaryotic genomic sequences. Our method is based on a generalized Hidden Markov Model with a new method for modeling the intron length distribution. This method allows approximation of the true intron length distribution more accurately than do existing programs. For genomic sequence data from human and Drosophila melanogaster, the accuracy of AUGUSTUS is superior to existing gene-finding approaches. The advantage of our program becomes apparent especially for larger input sequences containing more than one gene. The server is available at http://augustus.gobics.de.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1093/nar/gkh379

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cited by

See all 1,334

Metadata

Authors
Stanke, M., Steinkamp, R., Waack, S., & Morgenstern, B.
Venue
Nucleic Acids Research
Published
2004-07-01
Volume
32
Issue
Web Server
Pages
W309-W312
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
OpenAlex
W2118970397
Cited by
1,334
References
1
FWCI
0.87
Type
journal article
Language
en
Open access
hybrid

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: AUGUSTUS: a web server for gene finding in eukaryotes. https://app.cochat.ai/papers/10.1093/nar/gkh379
The paper
Stanke, M., Steinkamp, R., Waack, S., & Morgenstern, B. (2004). AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Research. https://doi.org/10.1093/nar/gkh379

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.