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Cited by 2,779

The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.

Primer3Plus, an enhanced web interface to Primer3

Open access
Untergasser, A., Nijveen, H., Rao, X., Bisseling, T., Geurts, R., Leunissen, J. A.M.·2007·Nucleic Acids Research

Abstract

Here we present Primer3Plus, a new web interface to the popular Primer3 primer design program as an enhanced alternative for the CGI- scripts that come with Primer3. Primer3 consists of a command line program and a web interface. The web interface is one large form showing all of the possible options. This makes the interface powerful, but at the same time confusing for occasional users. Primer3Plus provides an intuitive user interface using present-day web technologies and has been developed in close collaboration with molecular biologists and technicians regularly designing primers. It focuses on the task at hand, and hides detailed settings from the user until these are needed. We also added functionality to automate specific tasks like designing primers for cloning or step-wise sequencing. Settings and designed primer sequences can be stored locally for later use. Primer3Plus supports a range of common sequence formats, such as FASTA. Finally, primers selected by Primer3Plus can be sent to an order form, allowing tight integration into laboratory ordering systems. Moreover, the open architecture of Primer3Plus allows easy expansion or integration of external software packages. The Primer3Plus Perl source code is available under GPL license from SourceForge. Primer3Plus is available at http://www.bioinformatics.nl/primer3plus.

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Metadata

Authors
Untergasser, A., Nijveen, H., Rao, X., Bisseling, T., Geurts, R., & Leunissen, J. A. M.
Venue
Nucleic Acids Research
Published
2007-05-08
Volume
35
Issue
Web Server
Pages
W71-W74
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
OpenAlex
W2103740237
Cited by
2,779
References
6
FWCI
13.29
Type
journal article
Language
en
Open access
gold

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CoChat. (2026). Citation check: Primer3Plus, an enhanced web interface to Primer3. https://app.cochat.ai/papers/10.1093/nar/gkm306
The paper
Untergasser, A., Nijveen, H., Rao, X., Bisseling, T., Geurts, R., & Leunissen, J. A. M. (2007). Primer3Plus, an enhanced web interface to Primer3. Nucleic Acids Research. https://doi.org/10.1093/nar/gkm306

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Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.