The DOI matches its Crossref record; 31 of the 31 references it cites were found in a registry or an index.
The Sol Genomics Network (SGN)—from genotype to phenotype to breeding
Open accessAbstract
The Sol Genomics Network (SGN, http://solgenomics.net) is a web portal with genomic and phenotypic data, and analysis tools for the Solanaceae family and close relatives. SGN hosts whole genome data for an increasing number of Solanaceae family members including tomato, potato, pepper, eggplant, tobacco and Nicotiana benthamiana. The database also stores loci and phenotype data, which researchers can upload and edit with user-friendly web interfaces. Tools such as BLAST, GBrowse and JBrowse for browsing genomes, expression and map data viewers, a locus community annotation system and a QTL analysis tools are available. A new tool was recently implemented to improve Virus-Induced Gene Silencing (VIGS) constructs called the SGN VIGS tool. With the growing genomic and phenotypic data in the database, SGN is now advancing to develop new web-based breeding tools and implement the code and database structure for other species or clade-specific databases.
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Cites
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A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
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The map-based sequence of the rice genome
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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
The French–Italian Public Consortium for Grapevine Genome Characterization (2007) · Nature · doi:10.1038/nature06148 · Cited by 3,767
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Self-citationThe tomato genome sequence provides insights into fleshy fruit evolution
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Genome sequence and analysis of the tuber crop potato
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Cited by
Shivnauth, V., Pretheepkumar, S., Marchetta, E. J. R., Rossi, C. A. M., Amani, K., & Castroverde, C. D. M. (2023) · Functional & Integrative Genomics · doi:10.1007/s10142-023-01172-3 · Cited by 15
Nicotine biosynthesis is completed by cryptic activating glucosylation
Schwabe, B. T. W., Angstman, I. M., Vollheyde, K., Ingold, Z., Li, J., Stankevich, K. S., Spicer, C. D., Fascione, M. A., Grogan, G., Geu-Flores, F., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-72705-0 · Cited by 12
Metadata
- Authors
- Fernandez-Pozo, N., Menda, N., Edwards, J. D., Saha, S., Tecle, I. Y., Strickler, S. R., Bombarely, A., Fisher-York, T., Pujar, A., Foerster, H., Yan, A., & Mueller, L. A.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2014-11-26
- Volume
- 43
- Issue
- D1
- Pages
- D1036-D1041
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2122245399
- Cited by
- 710
- References
- 31
- FWCI
- 20.01
- Type
- journal article
- Language
- en
- Open access
- gold
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- Fernandez-Pozo, N., Menda, N., Edwards, J. D., Saha, S., Tecle, I. Y., Strickler, S. R., Bombarely, A., Fisher-York, T., Pujar, A., Foerster, H., Yan, A., & Mueller, L. A. (2015). The Sol Genomics Network (SGN)—from genotype to phenotype to breeding. Nucleic Acids Research. https://doi.org/10.1093/nar/gku1195
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