BetaCavityWeb: a webserver for molecular voids and channels

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Principles of CAD/CAM/CAE Systems

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Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells

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Structure of the Human BK Channel Ca 2+ -Activation Apparatus at 3.0 Å Resolution

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The Geometry of the Ribosomal Polypeptide Exit Tunnel

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MOLE: A Voronoi Diagram-Based Explorer of Molecular Channels, Pores, and Tunnels

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Intramolecular cavities in globular proteins

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PoreWalker: A Novel Tool for the Identification and Characterization of Channels in Transmembrane Proteins from Their Three-Dimensional Structure

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A 30 Å long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase

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MOLEonline 2.0: interactive web-based analysis of biomacromolecular channels

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Euclidean Voronoi diagram of 3D balls and its computation via tracing edges

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Software tools for identification, visualization and analysis of protein tunnels and channels

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A correlation between the loss of hydrophobic core packing interactions and protein stability 1 1Edited by A. R. Fersht

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Quasi-triangulation and interworld data structure in three dimensions

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MolAxis: a server for identification of channels in macromolecules

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Voronoi-Based Extraction and Visualization of Molecular Paths

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Dissection of multi-protein complexes using mass spectrometry: Subunit interactions in transthyretin and retinol-binding protein complexes

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Updating the topology of the dynamic Voronoi diagram for spheres in Euclidean d-dimensional space

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Three-dimensional beta-shapes and beta-complexes via quasi-triangulation

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Analysis of Void Volumes in Proteins and Application to Stability of the p53 Tumour Suppressor Protein

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Quasi-worlds and quasi-operators on quasi-triangulations

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RosettaHoles2: A volumetric packing measure for protein structure refinement and validation

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Structural insights into the substrate tunnel of Saccharomyces cerevisiae carbonic anhydrase Nce103

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BetaVoid: Molecular voids via beta-complexes and Voronoi diagrams

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Beta‐decomposition for the volume and area of the union of three‐dimensional balls and their offsets

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Voronoi diagrams, quasi-triangulations, and beta-complexes for disks in R2: the theory and implementation in BetaConcept

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Anomalies in quasi-triangulations and beta-complexes of spherical atoms in molecules

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Tunnels and Voids in Molecules via Voronoi Diagrams and Beta-Complexes

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QTF: Quasi-triangulation file format

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Folding the ribonuclease H domain of Moloney murine leukemia virus reverse transcriptase requires metal binding or a short N-terminal extension

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Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures

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Large language models generate functional protein sequences across diverse families

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On Generalization of Voronoi Diagram

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Edge-tracing algorithm for Euclidean Voronoi diagram of 3D spheres

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Euclidean proximity and power diagrams.

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On 2-Site Voronoi Diagrams under Geometric Distance Functions

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Region-expansion for the Voronoi diagram of 3D spheres

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