New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

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22. Evolution of Genome Size and Complexity in the Rhabdoviridae
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25. Flavan-3-ols Are an Effective Chemical Defense against Rust Infection
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26. Global transmission of influenza viruses from humans to swine
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27. Genome Degeneration and Adaptation in a Nascent Stage of Symbiosis
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41. Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens
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42. Four decades of transmission of a multidrug-resistant Mycobacterium tuberculosis outbreak strain
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43. Next Generation Sequencing Provides Rapid Access to the Genome of Puccinia striiformis f. sp. tritici, the Causal Agent of Wheat Stripe Rust
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45. Evidence for the sexual origin of heterokaryosis in arbuscular mycorrhizal fungi
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46. The pomegranate ( Punica granatum L.) genome provides insights into fruit quality and ovule developmental biology
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47. Identification of Alpha and Beta Coronavirus in Wildlife Species in France: Bats, Rodents, Rabbits, and Hedgehogs
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48. The Prevalence and Impact of Model Violations in Phylogenetic Analysis
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87. Rapid Evolution of PARP Genes Suggests a Broad Role for ADP-Ribosylation in Host-Virus Conflicts
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89. Evidence for common horizontal transmission of Wolbachia among butterflies and moths
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90. Genome-wide Comparative Analysis of the GRAS Gene Family in Populus, Arabidopsis and Rice
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91. Evolution of Animal and Plant Dicers: Early Parallel Duplications and Recurrent Adaptation of Antiviral RNA Binding in Plants
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93. Genomoviridae: a new family of widespread single-stranded DNA viruses
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94. Evolutionary and Functional Analyses of the Interaction between the Myeloid Restriction Factor SAMHD1 and the Lentiviral Vpx Protein
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95. Paired quantitative and qualitative assessment of the replication-competent HIV-1 reservoir and comparison with integrated proviral DNA
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97. Clarification of Taxonomic Status within the Pseudomonas syringae Species Group Based on a Phylogenomic Analysis
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98. A near-chromosome-scale genome assembly of the gemsbok ( Oryx gazella ): an iconic antelope of the Kalahari desert
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99. Marine Heatwave Drives Cryptic Loss of Genetic Diversity in Underwater Forests
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