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TRPA1 rare variants in chronic neuropathic and nociplastic pain patients
Open accessAbstract
Missing aspects of the heritability of chronic neuropathic pain, as a complex adult-onset trait, may be hidden within rare variants with low effect on disease risk, unlikely to be resolved by a single-variant approach. To identify new risk genes, we performed a next-generation sequencing of 107 pain genes and collapsed the rare variants through gene-wise aggregation analysis. The optimal unified sequence kernel association test was applied to 169 patients with painful neuropathy, 223 patients with nociplastic pain (82 diagnosed with chronic widespread pain and 141 with fibromyalgia), and 216 healthy controls. Frequency and features of variants in TRPA1 , which was the most significant gene, were further validated in 2 independent cohorts of 140 patients with chronic pain (90 with painful neuropathy and 50 with chronic widespread pain) and 34 with painless neuropathy. The effect of aminoacidic changes were modeled in silico according to physicochemical characteristics. TRPA1 was significantly enriched of rare variants which significantly discriminated chronic pain patients from healthy controls after Bonferroni correction ( P = 6.7 × 10 −4 , ρ = 1), giving a risk of 4.8-fold higher based on the simple burden test ( P = 0.0015, OR = 4.8). Among the 32 patients harboring TRPA1 variants, 24 (75%) were diagnosed with nociplastic pain, either fibromyalgia (12; 37.5%) or chronic widespread pain (12; 37.5%), whereas 8 (25%) with painful neuropathy. Irrespective of the clinical diagnosis, 12 patients (38%) complained of itch and 10 (31.3%) of cold-induced or cold-accentuated pain, mostly episodic. Our study widens the spectrum of channelopathy-related chronic pain disorders and contributes to bridging the gap between phenotype and targeted therapies based on patients' molecular profile.
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“In addition, the variation in the transient receptor potential vanilloid 1 (TRPV1) gene has also been shown to be associated with NPP (32).”
From Nociplastic pain: the prominent role of non-neuronal cells in central and peripheral sensitization (2026) · cites this paper as [32]
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Chronic pain: an update on burden, best practices, and new advances
Cohen, S. P., Vase, L., & Hooten, W. M. (2021) · The Lancet · doi:10.1016/s0140-6736(21)00393-7 · Cited by 2,614
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“17 The Douleur Neuropathique 4 questions 8 and the 9-item adjusted PainDetect 28 were used to screen those individuals with higher probability of having neuropathic pain.”
The IASP classification of chronic pain for ICD-11: chronic primary pain
Nicholas, M., Vlaeyen, J. W. S., Rief, W., Barke, A., Aziz, Q., Benoliel, R., Cohen, M., Evers, S., Giamberardino, M. A., Goebel, A., et al. (2019) · Pain · doi:10.1097/j.pain.0000000000001390 · Cited by 1,424
Nociplastic pain: towards an understanding of prevalent pain conditions
Fitzcharles, M.-A., Cohen, S. P., Clauw, D. J., Littlejohn, G., Usui, C., & Häuser, W. (2021) · The Lancet · doi:10.1016/s0140-6736(21)00392-5 · Cited by 1,253
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Brum, E. S., Landini, L., Souza Monteiro de Araújo, D., Marini, M., Geppetti, P., Nassini, R., De Logu, F., & Oliveira, S. M. (2025) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2025.01.040 · Cited by 8
Nociplastic pain: the prominent role of non-neuronal cells in central and peripheral sensitization
Lai, W., Tang, X., Chen, S., Zhou, Y., Qi, Z., Cao, M., Yuan, C., Yu, J., & Wen, C. (2026) · Frontiers in Immunology · doi:10.3389/fimmu.2026.1677310 · Cited by 4
“In addition, the variation in the transient receptor potential vanilloid 1 (TRPV1) gene has also been shown to be associated with NPP (32).”
Metadata
- Authors
- Marchi, M., Salvi, E., Andelic, M., Mehmeti, E., D'Amato, I., Cazzato, D., Chiappori, F., Lombardi, R., Cartelli, D., Devigili, G., Dalla Bella, E., Gerrits, M., Almomani, R., Malik, R. A., Ślęczkowska, M., Mazzeo, A., Gentile, L., Dib-Hajj, S., Waxman, S. G., Faber, C. G., Vecchio, E., de Tommaso, M., & Lauria, G.
- Affiliations
- Fondazione IRCCS Istituto Neurologico Carlo Besta (IT)
- Neuroalgology Unit, Fondazione IRCCS Istituto Neurologico Carlo Besta, Milan, Italy
- Institute of Biomedical Technologies (IT)
- Maastricht University Medical Centre (NL)
- Jordan University of Science and Technology (JO)
- University of Manchester (GB)
- Maastricht University (NL)
- University of Messina (IT)
- Department of Neurology, Yale University School of Medicine, New Haven, CT, United States
- Yale University (US)
- University of Bari Aldo Moro (IT)
- University of Milan (IT)
- Corresponding author
- Lauria, Giuseppe
- ORCID
- Marchi, Margherita
- Salvi, Erika
- Andelic, Mirna
- Mehmeti, Elkadia
- D'Amato, Ilaria
- Cazzato, Daniele
- Chiappori, Federica
- Lombardi, Raffaella
- Cartelli, Daniele
- Devigili, Grazia
- Dalla Bella, Eleonora
- Gerrits, Monique
- Almomani, Rowida
- Malik, Rayaz A.
- Ślęczkowska, Milena
- Mazzeo, Anna
- Gentile, Luca
- Dib-Hajj, Sulayman
- Waxman, Stephen G.
- Faber, Catharina G.
- Vecchio, Eleonora
- de Tommaso, Marina
- Lauria, Giuseppe
- Venue
- Pain
- Published
- 2023-04-19
- Volume
- 164
- Issue
- 9
- Pages
- 2048-2059
- ISSN
- 0304-3959 (ISSN-L)
- 1872-6623
- PMC
- PMC10443199
- OpenAlex
- W4366465447
- Cited by
- 29
- References
- 6
- Citations by year
- 2026: 10 · 2025: 9 · 2024: 8 · 2023: 2
- FWCI
- 5.15
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Pain (publishedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Research Publications (Maastricht University) (publishedVersion, cc-by-nc-nd)
- Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano) (submittedVersion, other-oa)
- CNR ExploRA (submittedVersion)
- Funders
- European Commission (721841, HORIZON2020, 602273)
- Ministero della Salute
- Topics
- Health Sciences › Medicine › Physiology (medical) › Pain Mechanisms and Treatments
- Life Sciences › Neuroscience › Sensory Systems › Ion Channels and Receptors
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Hereditary Neurological Disorders
- Keywords
- TRPA1, rare variants, chronic neuropathic pain, nociplastic pain, fibromyalgia, chronic widespread pain, channelopathies, cold pain, pruritus, amino acid substitutions
- MeSH terms
- TRPA1 Cation Channel, Humans, Neuralgia, Chronic Pain
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