Low major histocompatibility complex diversity in the Tasmanian devil predates European settlement and may explain susceptibility to disease epidemics
Open accessAbstract
The Tasmanian devil ( Sarcophilus harrisii ) is at risk of extinction owing to the emergence of a contagious cancer known as devil facial tumour disease (DFTD). The emergence and spread of DFTD has been linked to low genetic diversity in the major histocompatibility complex (MHC). We examined MHC diversity in historical and ancient devils to determine whether loss of diversity is recent or predates European settlement in Australia. Our results reveal no additional diversity in historical Tasmanian samples. Mainland devils had common modern variants plus six new variants that are highly similar to existing alleles. We conclude that low MHC diversity has been a feature of devil populations since at least the Mid-Holocene and could explain their tumultuous history of population crashes.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Muskox genetic diversity is lower than that of the Tasmanian devil and the cheetah.
“Muskox genetic diversity is lower than two mammalian species under threat that have undergo recent genetic bottlenecks, the Tasmanian devil (Sarcophilus harrisii)66 and the cheetah (Acinonyx jubatus)67.”
From Chromosomal-level reference genome assembly of muskox (Ovibos moschatus) from Banks Island in the Canadian Arctic, a resource for conservation genomics (2024) · cites this paper as [66]
Cites
Modern human origins: progress and prospects
Stringer, C. (2002) · Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences · doi:10.1098/rstb.2001.1057 · Cited by 534 · see citing works
Novacek, M. J., & Archer, M. (1983) · Systematic Zoology · doi:10.2307/2413177 · Cited by 385 · see citing works
Siddle, H. V. T., Kreiss, A., Eldridge, M. D. B., Noonan, E., Clarke, C. J., Pyecroft, S., Woods, G. M., & Belov, K. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704580104 · Cited by 299 · see citing works
Self-citationSavolainen, P., Leitner, T., Wilton, A. N., Matisoo-Smith, E. A., & Lundeberg, J. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0401814101 · Cited by 296 · see citing works
The Dingo: In Australia and Asia
Hayssen, V., & Corbett, L. K. (1996) · Journal of Wildlife Management · doi:10.2307/3802250 · Cited by 282 · see citing works
The dingo: in Australia and Asia
(1995) · Choice Reviews Online · doi:10.5860/choice.33-2129 · Cited by 236 · see citing works
Genetic diversity and population structure of Tasmanian devils, the largest marsupial carnivore
Jones, M. E., Paetkau, D., Geffen, E., et al. (2004) · Molecular Ecology · doi:10.1111/j.1365-294x.2004.02239.x · Cited by 226 · see citing works
Distribution and Impacts of Tasmanian Devil Facial Tumor Disease
McCallum, H. I., Tompkins, D. M., Jones, M. E., et al. (2007) · EcoHealth · doi:10.1007/s10393-007-0118-0 · Cited by 218 · see citing works
The Dingo in Australia and Asia
Sillero‐Zubiri, C., & Corbett, L. K. (1996) · Journal of Animal Ecology · doi:10.2307/5709 · Cited by 167 · see citing works
Belov, K., Deakin, J. E., Papenfuss, A. T., Baker, M. L., Melman, S. D., Siddle, H. V. T., Gouin, N., Goode, D. L., Sargeant, T., Robinson, M. D., et al. (2006) · PLoS Biology · doi:10.1371/journal.pbio.0040046 · Cited by 162 · see citing works
Self-citationSiddle, H. V. T., Marzec, J. A., Cheng, Y., Jones, M. E., & Belov, K. (2010) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2009.2362 · Cited by 141 · see citing works
Self-citationJohnson, C. N., & Wroe, S. W. (2003) · The Holocene · doi:10.1191/0959683603hl682fa · Cited by 112 · see citing works
Eimes, J. A., Bollmer, J. L., Whittingham, L. A., Johnson, J. A., van Oosterhout, C., & Dunn, P. O. (2011) · Journal of Evolutionary Biology · doi:10.1111/j.1420-9101.2011.02311.x · Cited by 111 · see citing works
Kreiss, A., Cheng, Y., Kimble, F. W., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0022402 · Cited by 90 · see citing works
Low MHC class II diversity in the Tasmanian devil (Sarcophilus harrisii)
Cheng, Y., Sanderson, C., Jones, M. E., et al. (2012) · Immunogenetics · doi:10.1007/s00251-012-0614-4 · Cited by 71 · see citing works
Guest, D. E., Wright, P. M., Paauwe, J., Paauwe, J., Guest, D. E., & Wright, P. M. (2013) · Research portal (Tilburg University) · Cited by 68 · see citing works
SMULDERS, M. J. M., Snoek, B. L., Booy, G., et al. (2003) · Conservation Genetics · doi:10.1023/a:1024767114707 · Cited by 64 · see citing works
Siddle, H. V. T., Sanderson, C., & Belov, K. (2007) · Immunogenetics · doi:10.1007/s00251-007-0238-2 · Cited by 63 · see citing works
Self-citationBROWN, O. J. F. (2006) · Alcheringa An Australasian Journal of Palaeontology · doi:10.1080/03115510609506855 · Cited by 54 · see citing works
Canine distemper: re‐emergence of an old enemy
Norris, J. M., Krockenberger, M. B., Baird, A., et al. (2006) · Australian Veterinary Journal · doi:10.1111/j.1751-0813.2006.00032.x · Cited by 42 · see citing works
Limited Genetic Diversity Preceded Extinction of the Tasmanian Tiger
Menzies, B. R., Renfree, M. B., Heider, T. N., Mayer, F., Hildebrandt, T. B., & Pask, A. J. (2012) · PLoS ONE · doi:10.1371/journal.pone.0035433 · Cited by 27 · see citing works
The thylacine's last straw: epidemic disease in a recent mammalian extinction
Paddle, R. (2012) · Australian Zoologist · doi:10.7882/az.2012.008 · Cited by 23 · see citing works
Guiler, E. R. (1992) · Medical Entomology and Zoology · Cited by 15 · see citing works
Miller, W., Hayes, V. M., Ratan, A., Petersen, D. C., Wittekindt, N. E., Miller, J., Walenz, B., Knight, J., Qi, J., Zhao, F., et al. (2011) · Smithsonian Digital Repository (Smithsonian Institution) · doi:10.1073/pnas.1102838108
Flagged first, then by citations
Cited by
Sorted by citations
Lok, S., Lau, T. N. H., Trost, B., Tong, A. H. Y., Paton, T., Wintle, R. F., Engstrom, M. D., Gunn, A., & Scherer, S. W. (2024) · Scientific Reports · doi:10.1038/s41598-024-67270-9 · Cited by 4 · see citing works
“Muskox genetic diversity is lower than two mammalian species under threat that have undergo recent genetic bottlenecks, the Tasmanian devil ( Sarcophilus harrisii ) 66 and the cheetah ( Acinonyx jubatus ) 67 .”
Background
- Authors
- Morris, K., Austin, J. J., & Belov, K.
- Affiliations
- The University of Sydney (AU)
- Museums Victoria (AU)
- Corresponding author
- Belov, Katherine
- Venue
- Biology Letters
- Publisher
- The Royal Society
- Published
- 2013-02-23
- Volume
- 9
- Issue
- 1
- Pages
- 20120900
- ISSN
- 1744-9561 (ISSN-L)
- 1744-957X
- PMC
- PMC3565505
- OpenAlex
- W2154385432
- Cited by
- 84
- References
- 24
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 2 · 2022: 34 · 2021: 1 · 2020: 6 · 2019: 9 · 2018: 7 · 2017: 2 · 2016: 5 · 2015: 8 · 2014: 2 · 2013: 3
- FWCI
- 2.50
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Biology Letters (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Adelaide Research & Scholarship (AR&S) (University of Adelaide) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Veterinary Oncology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Keywords
- Tasmanian devil, major histocompatibility complex, MHC diversity, devil facial tumour disease, contagious cancer, ancient DNA, population decline, disease susceptibility, extinction risk, Holocene
- MeSH terms
- Alleles, Amino Acid Sequence, Animals, Australia, Cloning, Molecular, Facial Neoplasms, Fossils, Genotype, Major Histocompatibility Complex, Marsupialia, Phylogeny, Time Factors, Genetic Variation, Polymerase Chain Reaction, Sequence Alignment, Sequence Analysis, DNA, Genetic Predisposition to Disease, Endangered Species
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review