Bacteria-induced mineral precipitation: a mechanistic review
Open accessAbstract
Micro-organisms contribute to Earth’s mineral deposits through a process known as bacteria-induced mineral precipitation (BIMP). It is a complex phenomenon that can occur as a result of a variety of physiological activities that influence the supersaturation state and nucleation catalysis of mineral precipitation in the environment. There is a good understanding of BIMP induced by bacterial metabolism through the control of metal redox states and enzyme-mediated reactions such as ureolysis. However, other forms of BIMP often cannot be attributed to a single pathway but rather appear to be a passive result of bacterial activity, where minerals form as a result of metabolic by-products and surface interactions within the surrounding environment. BIMP from such processes has formed the basis of many new innovative biotechnologies, such as soil consolidation, heavy metal remediation, restoration of historic buildings and even self-healing concrete. However, these applications to date have primarily incorporated BIMP-capable bacteria sampled from the environment, while detailed investigations of the underpinning mechanisms have been lagging behind. This review covers our current mechanistic understanding of bacterial activities that indirectly influence BIMP and highlights the complexity and connectivity between the different cellular and metabolic processes involved. Ultimately, detailed insights will facilitate the rational design of application-specific BIMP technologies and deepen our understanding of how bacteria are shaping our world.
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The thick cell walls of Gram-positive bacteria have an enormous ion-binding capacity, with near equal contributions from peptidoglycan and teichoic acids.
“Similarly, the thick cell walls of Gram-positive bacteria have an enormous ion-binding capacity,61 with near equal contributions from peptidoglycan and teichoic acids.62”
From Metals in Motion: Understanding Labile Metal Pools in Bacteria (2025) · cites this paper as [62]
The cell-surface section reports roughly equal contributions from teichoic-acid polyphosphate groups and peptidoglycan carboxyl groups, but specifically for calcium and magnesium binding in Gram-positive cell walls. Citation 62 supports that narrower finding, not an equal contribution to ion binding generally; the separate claim about enormous capacity is attached to citation 61. (LLM, conf=0.82)
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Cited by
Sorted by citations
A critical review of mineral-microbe interaction and co-evolution: Mechanisms and applications
Dong, H., Huang, L., Zhao, L., Zeng, Q., Liu, X., Sheng, Y., Shi, L., Wu, G., Jiang, H., Li, F., et al. (2022) · National Science Review · doi:10.1093/nsr/nwac128 · Cited by 472 · see citing works
Metals in Motion: Understanding Labile Metal Pools in Bacteria
Helmann, J. D. (2025) · Biochemistry · doi:10.1021/acs.biochem.4c00726 · Cited by 49 · see citing works
- Authors
- Hoffmann, T. D., Reeksting, B. J., & Gebhard, S.
- Affiliations
- University of Bath (GB)
- Corresponding author
- Hoffmann, Timothy D.
- Gebhard, Susanne
- Venue
- Microbiology
- Publisher
- Microbiology Society
- Published
- 2021-04-19
- Volume
- 167
- Issue
- 4
- ISSN
- 1350-0872 (ISSN-L)
- 1465-2080
- PMC
- PMC8289221
- OpenAlex
- W3137001576
- Cited by
- 206
- References
- 9
- Citations by year
- 2026: 73 · 2025: 48 · 2024: 34 · 2023: 27 · 2022: 20 · 2021: 4
- FWCI
- 1.86
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Locations
- Microbiology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- Engineering and Physical Sciences Research Council (EP/PO2081X/1)
- Topics
- Physical Sciences › Environmental Science › Environmental Engineering › Microbial Applications in Construction Materials
- Physical Sciences › Earth and Planetary Sciences › Earth-Surface Processes › Building materials and conservation
- Physical Sciences › Materials Science › Biomaterials › Calcium Carbonate Crystallization and Inhibition
- Keywords
- bacterial metabolism, ureolysis, mineral nucleation, supersaturation, metabolic by-products, bacterial surface interactions, biomineralization, soil consolidation, heavy metal remediation, historic building restoration, self-healing concrete, biotechnology applications
- MeSH terms
- Bacteria, Minerals, Oxidation-Reduction, Chemical Precipitation, Soil
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