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Consensus proposals for classification of the family Hepeviridae
Open accessAbstract
The family Hepeviridae consists of positive-stranded RNA viruses that infect a wide range of mammalian species, as well as chickens and trout. A subset of these viruses infects humans and can cause a self-limiting acute hepatitis that may become chronic in immunosuppressed individuals. Current published descriptions of the taxonomical divisions within the family Hepeviridae are contradictory in relation to the assignment of species and genotypes. Through analysis of existing sequence information, we propose a taxonomic scheme in which the family is divided into the genera Orthohepevirus (all mammalian and avian hepatitis E virus (HEV) isolates) and Piscihepevirus (cutthroat trout virus). Species within the genus Orthohepevirus are designated Orthohepevirus A (isolates from human, pig, wild boar, deer, mongoose, rabbit and camel), Orthohepevirus B (isolates from chicken), Orthohepevirus C (isolates from rat, greater bandicoot, Asian musk shrew, ferret and mink) and Orthohepevirus D (isolates from bat). Proposals are also made for the designation of genotypes within the human and rat HEVs. This hierarchical system is congruent with hepevirus phylogeny, and the three classification levels (genus, species and genotype) are consistent with, and reflect discontinuities in the ranges of pairwise distances between amino acid sequences. Adoption of this system would include the avoidance of host names in taxonomic identifiers and provide a logical framework for the assignment of novel variants.
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Bodewes, R., van der Giessen, J., Haagmans, B. L., Osterhaus, A. D. M. E., & Smits, S. L. (2013) · Journal of Virology · doi:10.1128/jvi.00568-13 · Cited by 117 · cited 3×
“Both schemes are out-of-date in light of the recent publication of sequences from divergent variants isolated from moose (Lin et al. , 2014), mink (Krog et al. , 2013), fox (Bodewes et al. , 2013), ferret (Li et al. , 2014), wild boar (Takahashi et al. , 2014) and camel (Woo et al. , 2014).”
Background
Cited by
EASL Clinical Practice Guidelines on hepatitis E virus infection
Dalton, H. R., Kamar, N., Baylis, S. A., Moradpour, D., Wedemeyer, H., & Negro, F. (2018) · Journal of Hepatology · doi:10.1016/j.jhep.2018.03.005 · Cited by 665
Hepatitis-E-Virus: Stellungnahmen des Arbeitskreises Blut des Bundesministeriums für Gesundheit
Gesundheit, M. D. A. B. D. B. F. (2015) · Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz · doi:10.1007/s00103-014-2103-4 · Cited by 374
Nair, V. P., Anang, S., Subramani, C., Madhvi, A., Bakshi, K., Srivastava, A., Shalimar, Nayak, B., CT, R. K., & Surjit, M. (2016) · PLOS Pathogens · doi:10.1371/journal.ppat.1005521 · Cited by 257
Zoonotic Hepatitis E Virus: Classification, Animal Reservoirs and Transmission Routes
Doceul, V., Bagdassarian, E., Demange, A., & Pavio, N. (2016) · Viruses · doi:10.3390/v8100270 · Cited by 257
Common and potential emerging foodborne viruses: a comprehensive review
Olaimat, A., Taybeh, A., Al-Nabulsi, A., Al-Holy, M., Hatmal, M., Alzyoud, J., Aolymat, I., Abughoush, M., Shahbaz, H., Alzyoud, A., et al. (2024) · Life · doi:10.3390/life14020190 · Cited by 52
Metadata
- Authors
- Smith, D. B., Simmonds, P., members of the International Committee on the Taxonomy of Viruses Study Group, Jameel, S., Emerson, S. U., Harrison, T. J., Meng, X.-J., Okamoto, H., Van der Poel, W. H. M., & Purdy, M. A.
- Venue
- Journal of General Virology
- Publisher
- Microbiology Society
- Published
- 2014-10-01
- Volume
- 95
- Issue
- 10
- Pages
- 2223-2232
- ISSN
- 0022-1317 (ISSN-L)
- 1465-2099
- OpenAlex
- W2003719005
- Cited by
- 671
- References
- 1
- FWCI
- 36.46
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Smith, D. B., Simmonds, P., members of the International Committee on the Taxonomy of Viruses Study Group, Jameel, S., Emerson, S. U., Harrison, T. J., Meng, X.-J., Okamoto, H., Van der Poel, W. H. M., & Purdy, M. A. (2014). Consensus proposals for classification of the family Hepeviridae. Journal of General Virology. https://doi.org/10.1099/vir.0.068429-0
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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