PreprintCited by 1Carbohydrate Chemistry and SynthesisEnzyme Structure and FunctionAdvanced Electron Microscopy Techniques and Applications

Mapping the architecture of the initiating phosphoglycosyl transferase from S. enterica O-antigen biosynthesis in a liponanoparticle

Open access
Dodge, Greg J., Anderson, Alyssa J., He, Yi, Liu, Weijing, Viner, Rosa, Imperiali, Barbara·2023·bioRxiv (Cold Spring Harbor Laboratory)

Preprint — published as 10.7554/elife.91125.2

Abstract

Bacterial cell surface glycoconjugates are critical for cell survival and for interactions between bacteria and their hosts. Consequently, the pathways responsible for their biosynthesis have untapped potential as therapeutic targets. The localization of many glycoconjugate biosynthesis enzymes to the membrane represents a significant challenge for expressing, purifying, and characterizing these enzymes. Here, we leverage cutting-edge methods to stabilize, purify, and structurally characterize WbaP, a phosphoglycosyl transferase (PGT) from Salmonella enterica (LT2) O-antigen biosynthesis without detergent solubilization from the lipid bilayer. From a functional perspective, these studies establish WbaP as a homodimer, reveal the structural elements responsible for oligomerization, shed light on the regulatory role of a domain of unknown function embedded within WbaP, and identify conserved structural motifs between PGTs and functionally unrelated UDP-sugar dehydratases. From a technological perspective, the strategy developed here is generalizable and provides a toolkit for studying small membrane proteins embedded in liponanoparticles beyond PGTs.

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Crossref · 10.1101/2023.06.16.545297

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Authors
Dodge, G. J., Anderson, A. J., He, Y., Liu, W., Viner, R., & Imperiali, B.
Affiliations
  • Massachusetts Institute of Technology (US)
  • Thermo Fisher Scientific (United States) (US)
Corresponding author
Imperiali, Barbara
Venue
bioRxiv (Cold Spring Harbor Laboratory)
Publisher
openRxiv
Published
2023-06-16
OpenAlex
W4381053482
Cited by
1
References
3
Citations by year
2024: 1
Type
posted content
Language
en
Open access
Licence
cc-by-nc-nd
Locations
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • PubMed Central (submittedVersion, cc-by-nc-nd)
Funders
  • National Institutes of Health (GM039334)
  • National Institute of General Medical Sciences (F32GM134576, R01GM039334, R01GM131627)
Topics
  • Physical Sciences › Chemistry › Organic Chemistry › Carbohydrate Chemistry and Synthesis
  • Physical Sciences › Materials Science › Materials Chemistry › Enzyme Structure and Function
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Advanced Electron Microscopy Techniques and Applications
Keywords
homodimerization, domain of unknown function, therapeutic target

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