PreprintCited by 5Advanced Fluorescence Microscopy TechniquesMolecular Sensors and Ion DetectionLuminescence and Fluorescent Materials

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

A tripartite chemogenetic fluorescent reporter: design and evaluation for visualizing ternary protein complexes

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Preprint — published as 10.1038/s41467-025-62241-8

Abstract

Most cellular processes are carried out by multiprotein assemblies. Although various molecular tools exist to visualize binary protein interactions in live cells, the visualization of multiprotein complexes remains a challenge. Here, we report the engineering of a complementation-based approach allowing one to visualize the interaction of three proteins through effective proximity-induced complementation of three fragments of pFAST, a chemogenetic fluorescent reporter that binds and stabilizes the fluorescent state of fluorogenic chromophores (so-called fluorogens). This tripartite-split-pFAST allowed the observation of dynamic ternary protein complexes in the cytosol, at the plasma membrane, in the nucleus and at the junction of multiple organelles, opening great prospects to study the role and function of multiprotein complexes in live cells and in various biologically relevant contexts.

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Research works printed but not linked: 38

  1. 10.1038/s41467-019-09253-3 · DOI
  2. 10.1038/s41580-019-0180-9 · DOI
  3. 10.1016/j.copbio.2008.06.003 · DOI
  4. 10.1016/j.tibs.2007.08.003 · DOI
  5. 10.1021/ja046699g · DOI
  6. 10.1146/annurev.biophys.37.032807.125842 · DOI
  7. 10.1146/annurev-biophys-051013-022846 · DOI
  8. 10.1038/s41467-019-10855-0 · DOI
  9. 10.1038/s41589-020-0611-0 · DOI
  10. 2020, A Far-Red Emitting Fluorescent Chemogenetic Reporter for In Vivo Molecular Imaging, Angew. Chem., 132, 18073, 10.1002/ange.202006576 · DOI
  11. 10.1021/acschembio.3c00631 · DOI
  12. 10.1073/pnas.1513094113 · DOI
  13. 10.1021/acs.accounts.2c00098 · DOI
  14. 10.1039/C7SC01364G · DOI
  15. García Casas, P. , et al. Simultaneous detection of membrane contact dynamics and associated Ca2+ signals by reversible chemogenetic reporters. Nat. Commun. 15, (2024). · DOI
  16. Li, X. et al. A fluorogenic complementation tool kit for interrogating lipid droplet-organelle interaction. J. Cell Biol. 223, (2024). · DOI · Paper page
  17. 10.1016/S0092-8674(00)80922-8 · DOI · Paper page
  18. 10.1038/nmeth720 · DOI
  19. 10.1073/pnas.0705181105 · DOI
  20. 10.1038/srep02854 · DOI
  21. 10.1021/acs.analchem.7b05140 · DOI
  22. 10.1021/acschembio.8b00417 · DOI
  23. 10.1093/nar/gks529 · DOI
  24. 10.1039/d1sc01454d · DOI
  25. 10.1073/pnas.92.11.4947 · DOI · Paper page
  26. 10.1021/ja043277y · DOI
  27. 10.1038/s41592-023-01988-8 · DOI · Paper page
  28. 10.1038/s41467-021-27334-0 · DOI
  29. 10.1038/s41592-020-0913-x · DOI
  30. 10.1083/jcb.201401126 · DOI
  31. 10.1038/nature22369 · DOI · Paper page
  32. 10.1016/S0955-0674(97)80068-3 · DOI
  33. 10.1126/science.2494702 · DOI
  34. 10.1021/bi001881p · DOI
  35. 10.1038/s41467-021-22102-6 · DOI
  36. 10.1038/nmeth.1318 · DOI
  37. 10.1021/acs.biochem.8b00649 · DOI
  38. 10.1016/j.crmeth.2021.100052 · DOI

Metadata

Authors
Bottone, S., Broch, F., Gedeon, A., Brion, A., El Hajji, L., Benaissa, H., & Gautier, A.
Affiliations
Centre National de la Recherche Scientifique (FR)
Corresponding author
Gautier, Arnaud
Venue
Nature Communications
Publisher
openRxiv
Published
2023-10-20
Volume
16
Issue
1
Pages
6955-6955
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4412785354
Cited by
5
References
1
Citations by year
2026: 3 · 2025: 2
FWCI
1.88
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by-nc-nd)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • HAL (submittedVersion, cc-by-nc-nd)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • Institut Universitaire de France
  • Sorbonne Université
  • H2020 European Research Council (724705)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Biophysics › Advanced Fluorescence Microscopy Techniques
  • Physical Sciences › Chemistry › Spectroscopy › Molecular Sensors and Ion Detection
  • Physical Sciences › Materials Science › Materials Chemistry › Luminescence and Fluorescent Materials
Keywords
ternary protein complex, protein complexes, fluorogens, split fluorescent proteins, live-cell imaging, protein-protein interaction, plasma membrane
MeSH terms
Chemogenetics, Cell Membrane, Cell Nucleus, Cytosol, Fluorescent Dyes, HeLa Cells, Humans, Microscopy, Fluorescence, Genes, Reporter, Multiprotein Complexes, HEK293 Cells

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