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Autorepression of Yeast Hsp70 co-chaperones by intramolecular interactions involving their J-domains
Open accessPreprint — published as 10.1016/j.cstres.2024.03.008 · Paper page
Abstract
The Hsp70 chaperones control protein homeostasis in all ATP-containing cellular compartments. J-domain proteins (JDPs) co-evolved with Hsp70s to trigger ATP-hydrolysis and catalytically upload various substrate polypeptides in need to be structurally modified by the chaperone. Here, we measured the protein disaggregation and refolding activities of the main yeast cytosolic Hsp70, Ssa1, in the presence of its most abundant JDPs, Sis1 and Ydj1, and two swap mutants, in which the J-domains have been interchanged. The observed differences by which the four constructs differently cooperate with Ssa1 and cooperate with each other, as well as their observed intrinsic ability to bind misfolded substrates and trigger Ssa1’s ATPase, indicates the presence of yet uncharacterized intra-molecular dynamic interactions between the J-domains and their remaining C-terminal domains. Taken together, the data suggest an auto-regulatory role to these intra-molecular interactions within both type A and B JDPs, which might have evolved to reduce energy-costly ATPase cycles by the Ssa1-4 chaperones that are the most abundant Hsp70s in the yeast cytosol. Graphical abstract: Lower panel: autoinhibited DnaJA or DnaJB dimers, drawn here as Swiss army knives with sequestered J-domains as folded blades, can bind misfolded polypeptides (violet). Upper panel: DnaJA or DnaJB become active when their J-domains are exposed and can bind ATP-Hsp70s, and transfer the misfolded polypeptides, respectively, onto Hsp70’s nucleotide binding (Cyan) and protein binding domains (Orange and Green). Hsp70’s interdomain linker (DLLLLDV, Magenta).
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Research works printed but not linked: 46
- 10.1074/jbc.M300922200 · DOI
- 10.1074/jbc.M511192200 · DOI
- 10.7554/eLife.02218 · DOI
- 10.1091/mbc.E03-03-0146 · DOI
- 10.1038/s41586-020-2906-4 · DOI
- Fauvet, B. , M. E. Rebeaud , S. Tiwari , P. De Los Rios and P. Goloubinoff (2021). “Repair or Degrade: the Thermodynamic Dilemma of Cellular Protein Quality-Control.” Frontiers in molecular biosciences 8. · DOI
- 10.1126/scisignal.2004135 · DOI
- 10.1038/nature02046 · DOI · Paper page
- 10.1038/s41589-018-0013-8 · DOI
- 10.1016/S0014-5793(04)00290-X · DOI
- 10.1126/science.aax1280 · DOI
- 10.1083/jcb.152.4.851 · DOI
- 2022, Two distinct classes of cochaperones compete for the EEVD motif in heat shock protein 70 to tune its chaperone activities, J Biol Chem, 298, 101697, 10.1016/j.jbc.2022.101697 · DOI
- 10.1007/s12192-018-0948-4 · DOI
- 10.1038/nrm2941 · DOI
- 10.1073/pnas.1914999116 · DOI
- 10.1016/j.molcel.2017.12.003 · DOI
- 2021, Yeast J-protein Sis1 prevents prion toxicity by moderating depletion of prion protein, Genetics, 219, 2
- 10.1073/pnas.96.10.5452 · DOI
- 10.1074/mcp.M115.054288 · DOI
- 2019, Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation, Cell reports, 26, 29, 10.1016/j.celrep.2018.12.037 · DOI
- 10.1074/jbc.273.43.27824 · DOI
- 10.1002/pmic.201500503 · DOI
- Marszalek, J. , P. De Los Rio , D. Cyr , M. P. Mayer , V. Adupa , C. Andréasson , G. L. Blatch , J. Braun , J. L. Brodsky , B. Bukau , J. P. Chapple , C. Conz , S. Dementin , P. Genevaux , O. Genest , P. Goloubinoff , J. Gestwicki , C. M. Hammond , J. K. Hines , K. Ishikawa , L. Joachimiak , J. Kirstein , K. Liberek , D. Mokranjac , N. Nillegoda , C. Ramos , M. Rebeaud , D. Ron , S. Rospert , C. Sahi , R. Shalgi , B. Tomiczek , R. Ushioda , E. Ustyantseva , Y. Ye , M. Zylicz and H. H. Kampinga (2023). “J-Domain Proteins: from Molecular Mechanisms to Diseases.” Cell Stress and Chaperones. · DOI
- 2014, Synergism between a foldase and an unfoldase: reciprocal dependence between the thioredoxin-like activity of DnaJ and the polypeptide-unfolding activity of DnaK, Front Mol Biosci, 1, 7
- 2015, Insights into the molecular mechanism of allostery in Hsp70s, Front Mol Biosci, 2, 58
- 2023, UCSF ChimeraX: Tools for structure building and analysis, Protein Science, 32, e4792, 10.1002/pro.4792 · DOI
- 10.1016/j.molcel.2018.03.028 · DOI
- 10.1074/jbc.RA120.013478 · DOI
- 10.1038/nature14884 · DOI
- 10.1073/pnas.2014979118 · DOI
- 10.1021/bi9824036 · DOI
- 2021, Regulatory inter-domain interactions influence Hsp70 recruitment to the DnaJB8 chaperone, Nature Communications, 12, 946, 10.1038/s41467-021-21147-x · DOI
- 10.1371/journal.pgen.1007084 · DOI
- 10.1038/nchembio.455 · DOI
- 10.1371/journal.pone.0026319 · DOI
- 2017, Protein misfolding in neurodegenerative diseases: implications and strategies, Transl Neurodegener, 6, 6, 10.1186/s40035-017-0077-5 · DOI · Paper page
- 2023, A fluorescent multi-domain protein reveals the unfolding mechanism of Hsp70, Nature Chemical Biology, 19, 198, 10.1038/s41589-022-01162-9 · DOI
- 10.1093/nar/gku989 · DOI · Paper page
- 10.1074/jbc.273.18.11032 · DOI
- 10.1074/jbc.270.5.2139 · DOI
- 2018, A biosensor-based framework to measure latent proteostasis capacity, Nature Communications, 9, 287, 10.1038/s41467-017-02562-5 · DOI
- 10.1073/pnas.2108163118 · DOI
- 10.1128/MCB.19.11.7751 · DOI
- 10.1016/j.jmb.2015.02.007 · DOI
- Zhang, R. , D. Malinverni , D. M. Cyr , P. L. Rios and N. B. Nillegoda (2022). “J-domain protein chaperone circuits in proteostasis and disease.” Trends Cell Biol. · DOI
Metadata
- Authors
- Rebeaud, M. E., Tiwari, S., Fauvet, B., Mohr, A., De Los Rios, P., & Goloubinoff, P.
- Affiliations
- École Polytechnique Fédérale de Lausanne (CH)
- University of Lausanne (CH)
- Corresponding author
- Goloubinoff, Pierre
- Venue
- Cell Stress and Chaperones
- Publisher
- openRxiv
- Published
- 2024-02-05
- Volume
- 29
- Issue
- 2
- Pages
- 338-348
- ISSN
- 1355-8145 (ISSN-L)
- PMC
- PMC10999819
- OpenAlex
- W4393058061
- Cited by
- 6
- References
- 1
- Citations by year
- 2026: 1 · 2025: 5
- FWCI
- 0.82
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by-nc-nd
- Locations
- Cell Stress and Chaperones (publishedVersion, cc-by-nc-nd)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- SERVAL (Université de Lausanne) (publishedVersion, cc-by-nc-nd)
- IRIS (submittedVersion, cc-by-nc-nd)
- Infoscience (Ecole Polytechnique Fédérale de Lausanne) (submittedVersion, cc-by-nc-nd)
- Funders
- National Science Foundation
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (200020, 175453, 178763)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Keywords
- Hsp70 chaperones, Hsp40, autorepression, intramolecular interactions, Ssa1, Sis1, Ydj1, protein disaggregation, protein refolding, ATPase activation, ATP hydrolysis, proteostasis
- MeSH terms
- Adenosine Triphosphatases, Adenosine Triphosphate, Protein Binding, Saccharomyces cerevisiae, Molecular Chaperones, HSP70 Heat-Shock Proteins, Saccharomyces cerevisiae Proteins, HSP40 Heat-Shock Proteins
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