PreprintCited by 3Microbial metabolism and enzyme functionTuberculosis Research and EpidemiologyMicrobial Natural Products and Biosynthesis

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MftG is crucial for ethanol metabolism of mycobacteria by linking mycofactocin oxidation to respiration

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Preprint — published as 10.7554/elife.97559.4 · Paper page

Abstract

Mycofactocin is a redox cofactor essential for the alcohol metabolism of mycobacteria.. While the biosynthesis of mycofactocin is well established, the gene mftG , which encodes an oxidoreductase of the glucose-methanol-choline superfamily, remained functionally uncharacterized. Here, we show that MftG enzymes are almost exclusively found in genomes containing mycofactocin biosynthetic genes and are present in 75% of organisms harboring these genes. Gene deletion experiments in Mycolicibacterium smegmatis demonstrated a growth defect of the Δ mftG mutant on ethanol as a carbon source, accompanied by an arrest of cell division reminiscent of mild starvation. Investigation of carbon and cofactor metabolism implied a defect in mycofactocin reoxidation. Cell-free enzyme assays and respirometry using isolated cell membranes indicated that MftG acts as a mycofactocin dehydrogenase shuttling electrons toward the respiratory chain. Transcriptomics studies also indicated remodeling of redox metabolism to compensate for a shortage of redox equivalents. In conclusion, this work closes an important knowledge gap concerning the mycofactocin system and adds a new pathway to the intricate web of redox reactions governing the metabolism of mycobacteria.

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Research works printed but not linked: 53

  1. 10.1099/00221287-45-2-253 · DOI
  2. 10.1128/jb.72.2.132-141.1956 · DOI · Paper page
  3. Zimmermann, M. , Kogadeeva, M. , Gengenbacher, M. , McEwen, G. , Mollenkopf, H. J. , Zamboni, N. et al. (2017) Integration of metabolomics and transcriptomics reveals a complex diet of Mycobacterium tuberculosis during early macrophage infection mSystems 2, · DOI
  4. 10.1186/1471-2164-12-21 · DOI
  5. 10.1128/mBio.00190-19 · DOI
  6. Dubey, A. A. , Wani, S. R. , and Jain, V . (2018) Methylotrophy in mycobacteria: Dissection of the methanol metabolism pathway in Mycobacterium smegmatis J Bacteriol 200, · DOI
  7. 10.1016/j.bbrc.2019.07.008 · DOI
  8. 10.1039/D0SC01172J · DOI
  9. 10.1007/s00253-023-12966-7 · DOI
  10. 10.1016/j.jbc.2021.101474 · DOI
  11. 10.1371/journal.pone.0269847 · DOI
  12. 10.1128/mBio.01665-21 · DOI
  13. 10.1007/s00253-019-09684-4 · DOI
  14. 10.1074/jbc.M117.795682 · DOI
  15. 10.1021/acs.biochem.8b00816 · DOI
  16. 10.1021/jacs.9b06102 · DOI
  17. 10.1021/acschembio.2c00659 · DOI
  18. 10.1186/s13068-019-1457-0 · DOI
  19. 10.1016/0022-2836(92)90992-S · DOI
  20. 10.1177/193229681100500507 · DOI
  21. 10.1371/journal.pone.0149846 · DOI
  22. 10.1128/jb.165.3.849-855.1986 · DOI
  23. 10.1093/NAR/GKAB1061 · DOI · Paper page
  24. Aleksenko, V. A. , Anand, D. , Remeeva, A. , Nazarenko, V. V. , Gordeliy, V. , Jaeger, K. E. , et al. (2020) Phylogeny and structure of fatty acid photodecarboxylases and glucose-methanol-choline oxidoreductases Catalysts 10, · DOI
  25. Gao, C. H. , Yu, G. C. , and Cai, P . (2021) ggVennDiagram: An intuitive, easy-to-use, and highly customizable R package to generate Venn diagram Front Genet 12, · DOI
  26. Dubey, A. A. , and Jain, V . (2019) MnoSR is a bona fide two-component system Involved in methylotrophic metabolism in Mycobacterium smegmatis Appl Environ Microbiol 85, · DOI
  27. 10.3389/fmicb.2023.1139276 · DOI
  28. Peña-Ortiz, L. , Schlembach, I. , Lackner, G. , and Regestein, L. (2020) Impact of oxygen supply and scale up on Mycobacterium smegmatis cultivation and mycofactocin formation Front Bioeng Biotechnol 8, · DOI
  29. Garcia-Heredia, A. , Pohane, A. A. , Melzer, E. S. , Carr, C. R. , Fiolek, T. J. , Rundell, S. R. , et al. (2018) Peptidoglycan precursor synthesis along the sidewall of pole-growing mycobacteria Elife 7, · DOI · Paper page
  30. 10.3389/fmicb.2018.00961 · DOI
  31. 10.3389/fmicb.2016.00947 · DOI
  32. 10.1128/JB.187.14.5023-5028.2005 · DOI · Paper page
  33. 10.1128/JB.183.24.7076-7086.2001 · DOI · Paper page
  34. 10.1007/s00253-010-2529-z · DOI
  35. 10.1371/journal.pone.0008614 · DOI · Paper page
  36. 10.1038/ncomms8542 · DOI
  37. 10.1089/15230860152664966 · DOI
  38. 10.1128/AEM.02391-15 · DOI
  39. DeJesus, M. A. , Gerrick, E. R. , Xu, W. , Park, S. W. , Long, J. E. , Boutte, C. C. , et al. (2017) Comprehensive essentiality analysis of the Mycobacterium tuberculosis genome via saturating transposon mutagenesis mBio 8, · DOI
  40. Adolph, C. R. (2021) Essentiality of succinate metabolism in Mycobacterium tuberculosis Thesis, University of Otago
  41. 10.1016/J.CELL.2021.06.033 · DOI · Paper page
  42. 10.1021/acscatal.5b00031 · DOI
  43. 10.1002/pro.3235 · DOI · Paper page
  44. 10.1093/nar/gkf436 · DOI · Paper page
  45. 10.1371/journal.pone.0009490 · DOI · Paper page
  46. 10.1128/AEM.01318-12 · DOI
  47. 10.1002/(SICI)1097-0320(19990101)35:1<55::AID-CYTO8>3.0.CO;2-2 · DOI
  48. 10.1007/s11306-020-1645-8 · DOI
  49. 10.1016/j.tcsw.2021.100052 · DOI
  50. 10.1021/acschembio.9b00664 · DOI
  51. 10.1038/nmeth.2019 · DOI · Paper page
  52. 10.1186/1471-2105-11-395 · DOI
  53. 10.1021/acs.analchem.5b00941 · DOI

Metadata

Authors
Graça, A. P., Nikitushkin, V., Ellerhorst, M., Vilhena, C., Klassert, T. E., Starick, A., Siemers, M., Al-Jammal, W. K., Vilotijevic, I., Slevogt, H., Papenfort, K., & Lackner, G.
Affiliations
  • Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) (DE)
  • Medizinische Hochschule Hannover (DE)
  • Friedrich Schiller University Jena (DE)
Corresponding author
Lackner, Gerald
Venue
eLife
Publisher
openRxiv
Published
2024-03-28
Volume
13
ISSN
2050-084X (ISSN-L)
OpenAlex
W4406929589
Cited by
3
References
2
Citations by year
2025: 3
FWCI
0.91
Type
journal article
Language
en
Open access
Locations
  • eLife (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
Funders
  • Carl-Zeiss-Stiftung
  • Freistaat Thüringen (2019 FGI 0003)
  • Deutscher Akademischer Austauschdienst
  • Deutsche Forschungsgemeinschaft (EXC 2051—, 390713860)
  • Leibniz-Gemeinschaft
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial metabolism and enzyme function
  • Health Sciences › Medicine › Infectious Diseases › Tuberculosis Research and Epidemiology
  • Life Sciences › Immunology and Microbiology › Applied Microbiology and Biotechnology › Microbial Natural Products and Biosynthesis
Keywords
alcohol metabolism, mycobacteria, glucose-methanol-choline oxidoreductase, redox cofactors, Mycolicibacterium smegmatis, redox metabolism, cell division arrest, carbon source utilization

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