PreprintCited by 9Enzyme Catalysis and ImmobilizationBiochemical and biochemical processesMicrobial Metabolic Engineering and Bioproduction

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Engineering of Transmembrane Alkane Monooxygenases to Improve a Key Reaction Step in the Synthesis of Polymer Precursor Tulipalin A

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Preprint — published as 10.1002/anie.202503464 · Paper page

Abstract

The α-methylene-γ-butyrolactone tulipalin A, naturally found in tulips can polymerize via addition at the vinyl group or via ring-opening polymerization, making it a highly promising monomer for biobased polymers. As tulipalin A biosynthesis in plants remains elusive, we propose a pathway for its synthesis starting from the metabolic intermediate isoprenol. For this, terminal hydroxylation of the α-methylene substrate isoprenyl acetate is a decisive step. While a panel of fungal unspecific peroxygenases showed a preference for the undesired epoxidation of the exo- olefin group, bacterial alkane monooxygenases were specific for terminal hydroxylation. A combination of protein engineering based on de novo structure prediction of the membrane enzymes with cell engineering allowed to increase the specific activity by 6-fold to 1.83 U g cdw -1 , unlocking this reaction for the fermentative production of tulipalin A from renewable resources.

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Research works printed but not linked: 47

  1. 1946, J. Am. Chem. Soc, 68, 2332, 10.1021/ja01215a057 · DOI
  2. 1967, Recl. Trav. Chim. Pays-Bas, 86, 709, 10.1002/recl.19670860703 · DOI
  3. 2017, Biosci. Biotechnol. Biochem, 81, 81, 10.1080/09168451.2016.1240608 · DOI
  4. S. Agarwal , Q. Jin , S. Maji , in Biobased Monomers Polym. Mater. (Eds.: P.B. Smith , R.A. Gross ), American Chemical Society, Washington, DC, 2012, pp. 197–212. · DOI
  5. 2020, Prog. Polym. Sci, 110, 101309, 10.1016/j.progpolymsci.2020.101309 · DOI
  6. 10.1021/jacs.6b07974 · DOI · Paper page
  7. 2014, Macromolecules, 47, 3614, 10.1021/ma5007717 · DOI
  8. 1970, J. Chem. Soc. Chem. Commun, 0, 1189, 10.1039/C29700001189 · DOI
  9. 10.1104/pp.112.195388 · DOI
  10. 10.1186/s13068-018-1210-0 · DOI
  11. 10.1016/j.ymben.2015.12.002 · DOI
  12. 2014, Microb. Cell Factories, 13, 135, 10.1186/s12934-014-0135-y · DOI
  13. 2023, Process Biochem, 130, 256, 10.1016/j.procbio.2023.04.021 · DOI
  14. 2018, ChemCatChem, 10, 1192, 10.1002/cctc.201701804 · DOI
  15. 10.1186/s13068-018-1051-x · DOI
  16. 2001, Tetrahedron Lett, 42, 3745, 10.1016/S0040-4039(01)00536-6 · DOI
  17. 2009, J. Am. Chem. Soc, 131, 6997, 10.1021/ja901289r · DOI
  18. 10.1016/j.copbio.2005.04.005 · DOI
  19. 10.1007/s00253-006-0748-0 · DOI
  20. 10.1016/0141-0229(94)90066-3 · DOI
  21. 10.1128/AEM.02053-12 · DOI
  22. 10.1042/BJ20131648 · DOI
  23. 10.1128/AEM.00822-16 · DOI
  24. 2023, Nat. Commun, 14, 2180, 10.1038/s41467-023-37869-z · DOI
  25. 2023, Nat. Struct. Mol. Biol, 30, 521, 10.1038/s41594-023-00958-0 · DOI
  26. 10.1016/j.ymben.2017.10.005 · DOI
  27. 10.1002/adsc.201100440 · DOI
  28. 10.1128/AEM.00949-12 · DOI
  29. 10.1006/plas.2001.1522 · DOI
  30. 10.1016/0957-4166(94)80031-6 · DOI
  31. 10.1128/JB.187.1.85-91.2005 · DOI
  32. 10.1128/AEM.01758-08 · DOI
  33. 2001, Microbiol. Read. Engl, 147, 1621, 10.1099/00221287-147-6-1621 · DOI
  34. 10.1111/j.1462-2920.2004.00567.x · DOI
  35. 10.1128/AEM.64.4.1175-1179.1998 · DOI
  36. 10.1038/sdata.2017.203 · DOI
  37. 10.1016/S0014-5793(03)00529-5 · DOI
  38. 2021, Proteins Struct. Funct. Bioinforma, 89, 436, 10.1002/prot.26030 · DOI · Paper page
  39. 10.1038/s41592-020-0848-2 · DOI · Paper page
  40. 2011, J. Cheminformatics, 3, 33, 10.1186/1758-2946-3-33 · DOI
  41. 10.1021/acs.jctc.0c01184 · DOI
  42. G. Bartoli , M. Bosco , R. Dalpozzo , E. Marcantoni , M. Massaccesi , S. Rinaldi , L. Sambri , Synlett 2002, 0039–0042. · DOI
  43. 2007, J. Sulfur Chem, 28, 581, 10.1080/17415990701516457 · DOI
  44. 1974, J. Org. Chem, 39, 1854, 10.1021/jo00927a015 · DOI
  45. 10.1016/S0957-4166(00)80144-5 · DOI
  46. 10.1186/1472-6750-11-92 · DOI
  47. 2017, Microb. Biotechnol, 10, 594, 10.1111/1751-7915.12607 · DOI

Metadata

Authors
Nigl, A., Delsoglio, V., Grgić, M., Malihan-Yap, L., Myrtollari, K., Spasic, J., Winkler, M., Oberdorfer, G., Taden, A., Anić, I., & Kourist, R.
Affiliations
  • Graz University of Technology (AT)
  • Henkel (Germany) (DE)
Corresponding author
Kourist, Robert
Venue
Angewandte Chemie International Edition
Publisher
openRxiv
Published
2024-07-08
Volume
64
Issue
25
Pages
e202503464-e202503464
ISSN
1433-7851 (ISSN-L)
OpenAlex
W4408707485
Cited by
9
References
1
Citations by year
2026: 8 · 2025: 1
FWCI
2.71
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • Angewandte Chemie International Edition (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • TU Graz, Internationale Beziehungen und Mobilitätsprogramme
  • Amt der NÖ Landesregierung
  • European Commission (101135542)
  • Österreichische Forschungsförderungsgesellschaft (91013)
  • Standortagentur Tirol
  • Bundesministerium für Digitalisierung und Wirtschaftsstandort
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Enzyme Catalysis and Immobilization
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Biotechnology › Biochemical and biochemical processes
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial Metabolic Engineering and Bioproduction
Keywords
alkane monooxygenase, protein engineering, terpenoid biosynthesis, allylic alcohol oxidation, ring-opening polymerization, bio-based polymers, fungal peroxygenases, de novo structure prediction, cell engineering, lactonization
MeSH terms
Mixed Function Oxygenases, Polymers, 4-Butyrolactone, Protein Engineering

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