PreprintCited by 5Microtubule and mitosis dynamicsCellular Mechanics and InteractionsProtein Structure and Dynamics

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Dimerization GAS2 mediates microtubule and F-actin crosslinking

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Preprint — published as 10.1038/s44318-025-00415-2 · Paper page

Abstract

GAS2 was originally identified as a growth arrest-specific protein, and recent studies have revealed its involvement in multiple cellular processes. Its dual interaction with actin filaments and microtubules highlights its essential role in cytoskeletal organization, such as cell division, apoptosis, and possibly tumorigenesis. However, the structural bases by which GAS2 regulates cytoskeletal dynamics remain unclear. In this study, we present cryo-EM structures of the GAS2- CH3 domain in complex with F-actin at 2.8 Å resolution, representing the first type 3 CH domain structure bound to F-actin, confirming its actin-binding activity. We also provide the first near- atomic resolution cryo-EM structure of the GAS2-GAR domain bound to microtubules and identified conserved microtubule-binding residues. Our biochemical experiments show that GAS2 promotes microtubule nucleation and polymerization and its C-terminal region is essential for dimerization, bundling of both F-actin and microtubules, and microtubule nucleation. Based on these results, we propose how GAS2 controls cytoskeletal organization.

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Research works printed but not linked: 63

  1. 10.1038/nature08908 · DOI
  2. 10.1091/mbc.E19-09-0491 · DOI
  3. 10.1038/s41580-018-0067-1 · DOI
  4. 2003, Conserved microtubule–actin interactions in cell movement and morphogenesis, Nat. Cell Biol, 57, 599
  5. Nakos, K. , et al. Septins mediate a microtubule–actin crosstalk that enables actin growth on microtubules. Proc. Natl. Acad. Sci. 119, e2202803119 (2022). · DOI
  6. 10.1016/j.ceb.2014.10.005 · DOI
  7. Willige, D. et al. Cytolinker Gas2L1 regulates axon morphology through microtubule-modulated actin stabilization. EMBO Rep. 20, (2019). · DOI
  8. 10.1038/ncomms5105 · DOI
  9. 10.1083/jcb.201112034 · DOI
  10. Pinto-Costa, R. & Sousa, M. M . Microtubules, actin and cytolinkers: how to connect cytoskeletons in the neuronal growth cone. Neurosci. Lett. 747, 135693 (2021). · DOI
  11. 10.1016/j.semcdb.2017.05.019 · DOI
  12. 10.1016/j.cell.2008.07.045 · DOI
  13. 10.1242/jcs.140558 · DOI
  14. 10.1006/dbio.1998.9086 · DOI
  15. Zhang, T. , Dayanandan, B. , Rouiller, I. , Lawrence, E. J. & Mandato, C. A . Growth-Arrest-Specific protein 2 inhibits cell division in xenopus embryos. PLoS One 6, (2011). · DOI
  16. 2002, Solution Structure of the Calponin CH Domain and Fitting to the 3D-Helical Reconstruction of F-Actin:Calponin, Structure, 10, 249, 10.1016/S0969-2126(02)00703-7 · DOI
  17. 10.1006/jmbi.1998.2406 · DOI
  18. 10.1016/S0969-2126(98)00141-5 · DOI
  19. 10.1002/9783527610754.PP02 · DOI
  20. 10.1038/ncomms11388 · DOI
  21. 10.1016/0014-5793(95)01098-Y · DOI
  22. 10.1242/jcs.00003 · DOI
  23. 1998, The single CH domain of calponin is neither sufficient nor necessary for F-actin binding, J. Cell Sci, 111, 1813, 10.1242/jcs.111.13.1813 · DOI
  24. 10.1016/j.cell.2015.07.012 · DOI · Paper page
  25. 10.1091/mbc.E12-11-0798 · DOI
  26. 10.1091/mbc.E10-01-0011 · DOI
  27. 10.1016/S0962-8924(01)02180-8 · DOI
  28. 10.1038/embor.2012.140 · DOI
  29. 10.1016/j.str.2017.05.006 · DOI
  30. 10.1016/j.ajhg.2018.10.019 · DOI
  31. 1995, Microfilament reorganization during apoptosis: The role of Gas2, a possible substrate for ICE-like proteases, EMBO J, 14, 5179, 10.1002/j.1460-2075.1995.tb00202.x · DOI
  32. 10.1083/jcb.117.6.1251 · DOI
  33. 10.1016/j.devcel.2021.04.017 · DOI
  34. Zhang, L. et al. A novel variant in GAS2 is associated with autosomal dominant nonsyndromic hearing impairment in a Chinese family. Hum. Genomics 18, (2024). · DOI
  35. 1987, Synapsin I bundles F-actin in a phosphorylation-dependent manner, Nat, 3266114, 704
  36. Cook, A. D. , Manka, S. W. , Wang, S. , Moores, C. A. & Atherton, J . A microtubule RELION-based pipeline for cryo-EM image processing. J. Struct. Biol. 209, (2020). · DOI · Paper page
  37. 10.1016/0888-7543(87)90001-2 · DOI
  38. 2022, ColabFold: making protein folding accessible to all, Nat. Methods, 196, 679
  39. 1982, Structural Diversity of Microtubules in the Supporting Cells of the Sensory Epithelium of Guinea Pig Organ of Corti, J. Electron Microsc, 31, 278
  40. Tolomeo, J. A. & Holley, M. C . Mechanics of Microtubule Bundles in Pillar Cells from the Inner Ear. Biophys. J. 73, (1997). · DOI
  41. 10.1038/s41594-018-0128-3 · DOI
  42. 10.15252/embj.2019102378 · DOI
  43. 10.1073/pnas.2205370119 · DOI
  44. 10.1016/j.jmb.2017.03.022 · DOI
  45. 10.1016/j.jmb.2016.01.032 · DOI
  46. 1999, Caspase-3 and caspase-7 but not caspase-6 cleave Gas2 in vitro: implications for microfilament reorganization during apoptosis, J. Cell Sci, 112, 4475, 10.1242/jcs.112.23.4475 · DOI
  47. 2006, The sensory and motor roles of auditory hair cells, Nat. Rev. Neurosci, 71, 19
  48. 1995, Three microtubule-organizing centres collaborate in a mouse cochlear epithelial cell during supracellularly coordinated control of microtubule positioning, J. Cell Sci, 108, 37, 10.1242/jcs.108.1.37 · DOI
  49. 10.1083/jcb.201201161 · DOI
  50. 10.1016/j.jsb.2005.07.007 · DOI
  51. Zheng, S. Q. et al. MotionCor2 - anisotropic correction of beam-induced motion for improved cryo- electron microscopy. Nat. Methods 14, 331 (2017). · DOI
  52. 10.1016/j.jsb.2015.08.008 · DOI
  53. 10.1016/j.jsb.2012.09.006 · DOI · Paper page
  54. 10.1016/j.jsb.2015.09.015 · DOI
  55. 10.1038/s41467-020-14842-8 · DOI
  56. 10.1016/j.jsb.2006.05.004 · DOI
  57. 10.1016/j.jsb.2013.07.005 · DOI
  58. 10.1016/j.str.2008.03.005 · DOI
  59. 10.1016/j.ymeth.2009.04.005 · DOI
  60. Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. Sect. D Biol. Crystallogr. 66, 213 (2010). · DOI · Paper page
  61. 10.1073/pnas.1403135111 · DOI
  62. Imasaki, T. et al. CAMSAP2 organizes a γ-tubulin-independent microtubule nucleation centre through phase separation. Elife 11, (2022). · DOI
  63. Taguchi, S. et al. Structural model of microtubule dynamics inhibition by kinesin-4 from the crystal structure of KLP-12 –tubulin complex. Elife 11, (2022). · DOI

Metadata

Authors
An, J., Imasaki, T., Narita, A., Niwa, S., Sasaki, R., Makino, T., Nitta, R., & Kikkawa, M.
Affiliations
  • The University of Tokyo (JP)
  • Kobe University (JP)
  • Nagoya University (JP)
  • Tohoku University (JP)
Corresponding author
Kikkawa, Masahide
Venue
The EMBO Journal
Publisher
openRxiv
Published
2024-08-19
Volume
44
Issue
10
Pages
2997-3024
ISSN
0261-4189 (ISSN-L)
OpenAlex
W4409039625
Cited by
5
References
1
Citations by year
2026: 4 · 2025: 1
FWCI
2.48
Type
journal article
Language
en
Open access
Locations
  • The EMBO Journal (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • Japan Agency for Medical Research and Development (JP22ama121002j002)
  • Ministry of Education, Culture, Sports, Science and Technology (22H05523, 23K27145, 21H05254, 21H05248, 21H04762)
  • Japan Society for the Promotion of Science (21H05248, 21H05254, 21H05247, 22K06809, 22H05523, 23K06315, 23K27145, 21H04762)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
Keywords
GAS2, spectraplakins, calponin homology domain, F-actin binding, microtubule binding, protein dimerization, microtubule nucleation, microtubule bundling, actin bundling, cytoskeletal organization, cryo-EM structure, hearing loss
MeSH terms
Growth Arrest-Specific Protein 6, Actins, Animals, Humans, Microfilament Proteins, Microtubules, Models, Molecular, Protein Binding, Cryoelectron Microscopy, Intercellular Signaling Peptides and Proteins, Protein Multimerization

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