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Coral anthozoan-specific opsins employ a novel chloride counterion for spectral tuning
Open accessPreprint — published as 10.7554/elife.105451 · Paper page
Abstract
Animal opsins are G protein coupled receptors that have evolved to sense light by covalently binding a retinal chromophore via a protonated (positively charged) Schiff base. A negatively charged amino acid in the opsin, acting as a counterion, stabilizes the proton on the Schiff base, which is essential for sensitivity to visible light. In this study, we investigate the spectroscopic properties of a unique class of opsins from a reef-building coral belonging to the anthozoan-specific opsin II group (ASO-II opsins), which intriguingly lack a counterion residue at any of established sites. Our findings reveal that, unlike other known animal opsins, the protonated state of the Schiff base in visible light-sensitive ASO-II opsins is highly dependent on exogenously supplied chloride ions (Cl − ). By using structural modelling and QM/MM calculations to interpret spectroscopy data, we conclude that, in the dark state, ASO-II opsins employ environmental Cl − as their native counterion, while a nearby polar residue, Glu292 in its protonated neutral form, facilitates Cl − binding. In contrast, Glu292 plays a crucial role in maintaining the protonation state of the Schiff base in the light-activated protein, serving as the counterion in the photoproduct. Furthermore, Glu292 is involved in G protein activation of the ASO-II opsin, suggesting that this novel counterion system coordinates multiple functional properties.
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Highly accurate protein structure prediction with AlphaFold
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Metadata
- Authors
- Sakai, Y., Sen, S., Sugihara, T., Kakeyama, Y., Iwasaki, M., Schertler, G. F. X., Deupi, X., Koyanagi, M., & Terakita, A.
- Affiliations
- Osaka Metropolitan University (JP)
- SIB Swiss Institute of Bioinformatics (CH)
- Paul Scherrer Institute (CH)
- Corresponding author
- Terakita, Akihisa
- ORCID
- Venue
- eLife
- Publisher
- openRxiv
- Published
- 2024-12-12
- Volume
- 14
- ISSN
- 2050-084X (ISSN-L)
- OpenAlex
- W4413905433
- Cited by
- 3
- References
- 1
- Citations by year
- 2026: 3
- FWCI
- 1.18
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- eLife (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
- Funders
- Japanese Ministry of Education, Culture, Sports, Science and Technology Grants-in-Aid for Scientific Research (23H02516, 22H02663, JP20J01841)
- Japan Science and Technology Agency Core Research for Evolutional Science and Technology (JPMJCR1753)
- European Union's Horizon 2020 research and innovation programme (grant agreement 951644, Marie Skłodowska-Curie grant agreement 884104)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Photoreceptor and optogenetics research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Physical Sciences › Materials Science › Materials Chemistry › Photochromic and Fluorescence Chemistry
- Keywords
- chloride counterion, Schiff base protonation, retinal chromophore, spectral tuning, G protein activation, photoproducts, G protein-coupled receptors, reef-building corals, photosensitivity
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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