PreprintCited by 2Bacterial Genetics and BiotechnologyEscherichia coli research studiesBiochemical and Structural Characterization

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A novel peptidoglycan deacetylase modulates daughter cell separation in E. coli

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Preprint — published as 10.1371/journal.pgen.1011626 · Paper page

Abstract

Peptidoglycan hydrolases facilitate bacterial cell wall growth by creating space for insertion of new material and allowing physical separation of daughter cells. In Escherichia coli , three peptidoglycan amidases, AmiA, AmiB and AmiC, cleave septal peptidoglycan during cell division. The LytM-domain proteins EnvC and NlpD activate these amidases either from inside the cell or the outer membrane: EnvC binds to the cytoplasmic membrane-anchored divisome components FtsEX, and NlpD and ActS are outer membrane lipoproteins. Here we report the identification of a novel periplasmic deacetylase called SddA that removes acetyl groups from denuded peptidoglycan glycan strands, the products of amidases. SddA is a substrate for the periplasmic protease Prc, suggesting regulation via protein degradation. The sddA gene is co-expressed with the gene encoding EnvC, linking SddA function to amidase activation. Consistent with this link, the deletion of sddA alleviates phenotypes associated with lack of amidase activation, while overexpression of sddA alleviates phenotypes related to a defective Tol-Pal system and causes cell chaining due to reduced septum peptidoglycan cleavage unless envC is co-expressed. We present a model according to which SddA modulates the activation of the septum-splitting amidases during cell division. AUTHOR SUMMARY: Bacteria surround their cell membrane by the essential peptidoglycan (cell wall) layer to prevent bursting open due to their turgor. During cell division, bacteria produce a septum at midcell, which must be cleaved for daughter cells to separate. Here, we report the identification of a new enzyme, SddA, that modifies a particular type of peptidoglycan material, denuded glycan chains released during the splitting of septal peptidoglycan for daughter cell separation, in the Gram-negative Escherichia coli . We propose a model in which SddA modulates a switch in the septal peptidoglycan splitting, ensuring splitting is activated from the cell membrane in the early stages of cell division and from the outer membrane in the late stages.

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Metadata

Authors
Hernandez-Rocamora, V., Martorana, A. M., Belloso, A., Ballesteros, D., Zaccaria, M., Perez, A. J., Iorga, B. I., Abia, D., Gray, J., Breukink, E., Xiao, J., Pazos, M., Polissi, A., & Vollmer, W.
Affiliations
  • Centre for Bacterial Cell Biology, Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom
  • University of Milan (IT)
  • Consejo Superior de Investigaciones Científicas (ES)
  • Johns Hopkins University (US)
  • Centre National de la Recherche Scientifique (FR)
  • Newcastle University (GB)
  • Utrecht University (NL)
  • The University of Queensland (AU)
Corresponding author
Vollmer, Waldemar
Venue
PLoS Genetics
Publisher
openRxiv
Published
2025-02-19
Volume
21
Issue
9
Pages
e1011626-e1011626
ISSN
1553-7390 (ISSN-L)
OpenAlex
W4414037568
Cited by
2
References
1
Citations by year
2026: 1 · 2025: 1
FWCI
1.18
Type
journal article
Language
en
Open access
Locations
  • PLoS Genetics (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • DIGITAL.CSIC (Spanish National Research Council (CSIC)) (publishedVersion, other-oa)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed Central (submittedVersion, cc-by)
  • HAL (submittedVersion, cc-by)
  • Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano) (submittedVersion, other-oa)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • Utrecht University Repository (Utrecht University) (submittedVersion, other-oa)
Funders
  • Agence Nationale de la Recherche (ANR-20-PAMR-0010)
  • Biotechnology and Biological Sciences Research Council (BB/W005557/1, BB/W013630/1)
  • National Institute of General Medical Sciences (F32GM150262, R35GM136436)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Immunology and Microbiology › Microbiology › Escherichia coli research studies
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Structural Characterization
Keywords
Escherichia coli cell division, daughter cell separation, Amia, AMIC, ACT, periplasmic enzymes, Tol-Pal system, divisome

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