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Lipid-facilitated opening of the ADAM10 sheddase revealed by enhanced sampling simulations
Open accessPreprint — published as 10.1002/advs.202515713
Abstract
ADAM10 is a crucial membrane-bound metalloprotease that regulates cellular physiology by cleaving and releasing membrane-anchored proteins, including adhesion molecules and growth factor precursors, thereby modulating cell signaling, adhesion, and migration. Despite its central role, its activation mechanisms are not fully understood. Here, we model how phosphatidylserine (PS) exposure during apoptosis triggers ADAM10 activation. We confirmed that PS externalization leads to shedding of CD43 from the surface of T cells via ADAM10 activity. Intriguingly, ADAM10 activation correlated with a loss of monoclonal ADAM10 antibody binding, suggesting a PS-induced conformational change that alters epitope accessibility. To explore this lipid-mediated conformational change of ADAM10, we employed molecular dynamics (MD) simulations to map the conformational landscape of ADAM10. Our simulations revealed that in the absence of PS, ADAM10 samples predominantly closed and intermediate states. By contrast, the presence of PS destabilizes the closed conformation, thereby favoring open states. We provide a mechanistic explanation for this PS-induced conformational change which drives ADAM10 activation and loss of mAb binding through conformational change. These findings offer new insights into the lipid-mediated regulation of ADAM10 and its conformational dynamics.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Metadata
- Authors
- Schahl, A., Haloi, N., Carroni, M., Zhang, S., Sattentau, Q. J., Sezgin, E., Delemotte, L., & Howard, R. J.
- Affiliations
- Science for Life Laboratory (SE)
- Stockholm University (SE)
- University of Oxford (GB)
- Max Delbrück Center (DE)
- Corresponding author
- Schahl, Adrien
- Sezgin, Erdinc
- Delemotte, Lucie
- Howard, Rebecca J
- ORCID
- Venue
- Advanced Science
- Publisher
- openRxiv
- Published
- 2025-08-22
- Volume
- 13
- Issue
- 19
- Pages
- e15713-e15713
- ISSN
- 2198-3844 (ISSN-L)
- PMC
- PMC13045381
- OpenAlex
- W7131392829
- Cited by
- 3
- References
- 1
- Citations by year
- 2026: 3
- FWCI
- 9.61
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Advanced Science (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- PubMed Central (publishedVersion, cc-by)
- MDC Repository (Max-Delbrueck-Center for Molecular Medicine) (acceptedVersion)
- MDC Repository (Max-Delbrueck-Center for Molecular Medicine) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Hevolution Foundation
- European High Performance Computing Joint Undertaking
- Human Frontier Science Program
- UK Research and Innovation
- University of Oxford
- Karolinska Institutet
- Knut och Alice Wallenbergs Stiftelse
- Vetenskapsrådet (2024-00289, 2020-00997, 2019-02433, 2022-04305, VR-RFI 2016-00968, 2016‐00968, 2020-02682, 2024-02993, 2021-05806)
- China Scholarship Council
- Science for Life Laboratory (VR-RFI 2016-00968)
- Medical Research Council
- HORIZON EUROPE Marie Sklodowska-Curie Actions (101107036)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Protease and Inhibitor Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
- Keywords
- ADAM10, phosphatidylserine exposure, apoptosis, T cells, conformational change, epitope accessibility, monoclonal antibody binding, protein-lipid interactions, membrane-bound protease, enhanced sampling molecular dynamics
- MeSH terms
- ADAM10 Protein, Humans, Membrane Proteins, Phosphatidylserines, Protein Conformation, Apoptosis, Amyloid Precursor Protein Secretases, Molecular Dynamics Simulation
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