Regulatory divergence modifies limb length between mammals
Cretekos, Chris J., Wang, Ying, Green, Eric D., NISC Comparative Sequencing Program, Martin, James F., Rasweiler, John J., Behringer, Richard R.·2008·Genes & Development
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- From Development to Regeneration: Insights into Flight Muscle Adaptations from Bat Muscle Cell LinesFengyan Deng, Valentina Peña, Pedro Morales‐Sosa, Andrea Bernal Rivera, Bowen Yang, Shengping Huang, Sonia Ghosh, Maria L. Katt, Luciana Andrea Castellano, Lucinda E. Maddera et al. · 2025 · Cells
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- Mammalian Limbs Take FlightScott D. Weatherbee · 2008 · Developmental Cell
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