Cited by 8Evolution and Genetic DynamicsEvolutionary Game Theory and CooperationComplex Systems and Dynamics

How Turing parasites expand the computational landscape of digital life

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Seoane, Luís F., Solé, Ricard·2023·Physical Review E

Abstract

Why are living systems complex? Why does the biosphere contain living beings with complexity features beyond those of the simplest replicators? What kind of evolutionary pressures result in more complex life forms? These are key questions that pervade the problem of how complexity arises in evolution. One particular way of tackling this is grounded in an algorithmic description of life: living organisms can be seen as systems that extract and process information from their surroundings to reduce uncertainty. Here we take this computational approach using a simple bit string model of coevolving agents and their parasites. While agents try to predict their worlds, parasites do the same with their hosts. The result of this process is that, to escape their parasites, the host agents expand their computational complexity despite the cost of maintaining it. This, in turn, is followed by increasingly complex parasitic counterparts. Such arms races display several qualitative phases, from monotonous to punctuated evolution or even ecological collapse. Our minimal model illustrates the relevance of parasites in providing an active mechanism for expanding living complexity beyond simple replicators, suggesting that parasitic agents are likely to be a major evolutionary driver for biological complexity.

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Crossref · 10.1103/physreve.108.044407

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  • In silico coevolution models, in vitro evolution and genomic analyses have shown that parasites actively promote diversity and evolvability.

    “In silico coevolution models [333,334], in vitro evolution [335,336] and genomic analyses [337,338] have shown that parasites actively promote diversity and evolvability, as illustrated by the phylogenetic trees in figure 9a,b.”

    From Fundamental constraints to the logic of living systems (2024) · cites this paper as [334]

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  • Fundamental constraints to the logic of living systems

    Solé, R., Kempes, C. P., Corominas-Murtra, B., De Domenico, M., Kolchinsky, A., Lachmann, M., Libby, E., Saavedra, S., Smith, E., & Wolpert, D. (2024) · Interface Focus · doi:10.1098/rsfs.2024.0010 · Cited by 34 · see citing works

    “In silico coevolution models [333,334], in vitro evolution [335,336] and genomic analyses [337,338] have shown that parasites actively promote diversity and evolvability, as illustrated by the phylogenetic trees in figure 9 a , b .”
    BackgroundSelf-citation

Authors
Seoane, L. F., & Solé, R.
Affiliations
  • Centro Nacional de Biotecnología (ES)
  • Institució Catalana de Recerca i Estudis Avançats (ES)
Venue
Physical Review E
Published
2023-10-23
Volume
108
Issue
4
Pages
044407-044407
ISSN
  • 2470-0045 (ISSN-L)
  • 2470-0053
OpenAlex
W3021896555
Cited by
8
References
8
Citations by year
2026: 1 · 2024: 2 · 2022: 2 · 2021: 1 · 2020: 2
FWCI
0.50
Type
journal article
Language
en
Open access
Locations
  • Physical review. E (publishedVersion)
  • PubMed (publishedVersion)
  • arXiv (Cornell University) (submittedVersion)
  • Repositori digital de la UPF (Universitat Pompeu Fabra) (submittedVersion)
  • DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion)
  • arXiv (Cornell University)
Funders
  • Ministerio de Economía y Competitividad (FIS2015-67616-P)
  • Ministerio de Ciencia e Innovación (IJC2018-036694-I)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
  • Social Sciences › Sociology and Political Science › Evolutionary Game Theory and Cooperation
  • Physical Sciences › Physics and Astronomy › Statistical and Nonlinear Physics › Complex Systems and Dynamics
Keywords
biological complexity, coevolution, arms race, host-parasite interactions, algorithmic complexity, evolutionary phases, ecological collapse, punctuated evolution, origin of life
MeSH terms
Animals, Biological Evolution, Parasites

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