The DOI matches its Crossref record; 54 of the 54 references it cites were found in a registry or an index.
Sites and Regulation of Auxin Biosynthesis in Arabidopsis Roots
Open accessAbstract
Auxin has been shown to be important for many aspects of root development, including initiation and emergence of lateral roots, patterning of the root apical meristem, gravitropism, and root elongation. Auxin biosynthesis occurs in both aerial portions of the plant and in roots; thus, the auxin required for root development could come from either source, or both. To monitor putative internal sites of auxin synthesis in the root, a method for measuring indole-3-acetic acid (IAA) biosynthesis with tissue resolution was developed. We monitored IAA synthesis in 0.5- to 2-mm sections of Arabidopsis thaliana roots and were able to identify an important auxin source in the meristematic region of the primary root tip as well as in the tips of emerged lateral roots. Lower but significant synthesis capacity was observed in tissues upward from the tip, showing that the root contains multiple auxin sources. Root-localized IAA synthesis was diminished in a cyp79B2 cyp79B3 double knockout, suggesting an important role for Trp-dependent IAA synthesis pathways in the root. We present a model for how the primary root is supplied with auxin during early seedling development.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Assaying chimeric genes in plants: The GUS gene fusion system
Jefferson, R. A. (1987) · Plant Molecular Biology Reporter · doi:10.1007/bf02667740 · Cited by 4,486
Local, Efflux-Dependent Auxin Gradients as a Common Module for Plant Organ Formation
Benková, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertová, D., Jürgens, G., & Friml, J. (2003) · Cell · doi:10.1016/s0092-8674(03)00924-3 · Cited by 2,633
Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis
Friml, J., Wiśniewska, J., Benková, E., Mendgen, K., & Palme, K. (2002) · Nature · doi:10.1038/415806a · Cited by 1,426
A Gene Expression Map of the Arabidopsis Root
Birnbaum, K., Shasha, D. E., Wang, J. Y., Jung, J. W., Lambert, G. M., Galbraith, D. W., & Benfey, P. N. (2003) · Science · doi:10.1126/science.1090022 · Cited by 1,258
Organization and cell differentiation in lateral roots of Arabidopsis thaliana
Malamy, J. E., & Benfey, P. N. (1997) · Development · doi:10.1242/dev.124.1.33 · Cited by 1,258
Auxin Transport Promotes Arabidopsis Lateral Root Initiation
Casimiro, I., Marchant, A., Bhalerao, R. P., Beeckman, T., Dhooge, S., Swarup, R., Graham, N., Inzé, D., Sandberg, G., Casero, P. J., et al. (2001) · The Plant Cell · doi:10.1105/tpc.13.4.843 · Cited by 1,060
Self-citationAtPIN4 Mediates Sink-Driven Auxin Gradients and Root Patterning in Arabidopsis
Friml, J., Benková, E., Blilou, I., Wisniewska, J., Hamann, T., Ljung, K., Woody, S., Sandberg, G., Scheres, B., Jürgens, G., et al. (2002) · Cell · doi:10.1016/s0092-8674(02)00656-6 · Cited by 851
Self-citationAuxin transport — shaping the plant
Friml, J. (2003) · Current Opinion in Plant Biology · doi:10.1016/s1369526602000031 · Cited by 745
Dissecting Arabidopsis lateral root development
Casimiro, I., Beeckman, T., Graham, N., Bhalerao, R., Zhang, H., Casero, P., Sandberg, G., & Bennett, M. J. (2003) · Trends in Plant Science · doi:10.1016/s1360-1385(03)00051-7 · Cited by 683
Self-citationSites and homeostatic control of auxin biosynthesis in Arabidopsis during vegetative growth
Ljung, K., Bhalerao, R. P., & Sandberg, G. (2001) · The Plant Journal · doi:10.1046/j.1365-313x.2001.01173.x · Cited by 653
Self-citation
Cited by
The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, J. A., Nishiyama, T., Hasebe, M., Bowman, J. L., Gribskov, M., dePamphilis, C., Albert, V. A., Aono, N., Aoyama, T., Ambrose, B. A., et al. (2011) · Science · doi:10.1126/science.1203810 · Cited by 868
Self-citationAuxin Control of Root Development
Overvoorde, P., Fukaki, H., & Beeckman, T. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a001537 · Cited by 848
Arabidopsis lateral root development: an emerging story
Péret, B., De Rybel, B., Casimiro, I., Benková, E., Swarup, R., Laplaze, L., Beeckman, T., & Bennett, M. J. (2009) · Trends in Plant Science · doi:10.1016/j.tplants.2009.05.002 · Cited by 818
The auxin influx carrier LAX3 promotes lateral root emergence
Swarup, K., Benková, E., Swarup, R., Casimiro, I., Péret, B., Yang, Y., Parry, G., Nielsen, E., De Smet, I., Vanneste, S., et al. (2008) · Nature Cell Biology · doi:10.1038/ncb1754 · Cited by 817
Self-citationGlucosinolate metabolism and its control
Grubb, C. D., & Abel, S. (2006) · Trends in Plant Science · doi:10.1016/j.tplants.2005.12.006 · Cited by 733
Metadata
- Authors
- Ljung, K., Hull, A. K., Celenza, J., Yamada, M., Estelle, M., Normanly, J., & Sandberg, G.
- Venue
- The Plant Cell
- Publisher
- Oxford University Press (OUP)
- Published
- 2005-03-16
- Volume
- 17
- Issue
- 4
- Pages
- 1090-1104
- ISSN
- 1040-4651 (ISSN-L)
- 1532-298X
- OpenAlex
- W2170109671
- Cited by
- 560
- References
- 54
- FWCI
- 40.15
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Sites and Regulation of Auxin Biosynthesis in Arabidopsis Roots. https://app.cochat.ai/papers/10.1105/tpc.104.029272
- The paper
- Ljung, K., Hull, A. K., Celenza, J., Yamada, M., Estelle, M., Normanly, J., & Sandberg, G. (2005). Sites and Regulation of Auxin Biosynthesis in Arabidopsis Roots. The Plant Cell. https://doi.org/10.1105/tpc.104.029272
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.