The DOI matches its Crossref record; 3 of the 3 references it cites were found in a registry or an index.
Decision making in xia 2
Open accessAbstract
xia 2 is an expert system for the automated reduction of macromolecular crystallography (MX) data employing well trusted existing software. The system can process a full MX data set consisting of one or more sequences of images at one or more wavelengths from images to structure-factor amplitudes with no user input. To achieve this many decisions are made, the rationale for which is described here. In addition, it is critical to support the testing of hypotheses and to allow feedback of results from later stages in the analysis to earlier points where decisions were made: the flexible framework employed by xia 2 to support this feedback is summarized here. While the decision-making protocols described here were developed for xia 2, they are equally applicable to interactive data reduction.
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Kabsch, W. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909047337 · Cited by 16,463
Overview of the CCP 4 suite and current developments
Winn, M. D., Ballard, C. C., Cowtan, K. D., Dodson, E. J., Emsley, P., Evans, P. R., Keegan, R. M., Krissinel, E. B., Leslie, A. G. W., McCoy, A., et al. (2011) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444910045749 · Cited by 12,353
Linking Crystallographic Model and Data Quality
Karplus, P. A., & Diederichs, K. (2012) · Science · doi:10.1126/science.1218231 · Cited by 1,781
Research works printed but not linked: 21
- Allan, R. et al. (2003). Proceedings of the UK e-Science All Hands Meeting 2003, edited by S. Cox, p. 230. http://www.nesc.ac.uk/events/ahm2003/AHMCD/pdf/049.pdf.
- Battye, 2011, Acta Cryst. D, 67, 271, 10.1107/S0907444910048675 · DOI
- Dauter, 1999, Acta Cryst. D, 55, 1703, 10.1107/S0907444999008367 · DOI
- Evans, 2006, Acta Cryst. D, 62, 72, 10.1107/S0907444905036693 · DOI · Paper page
- Evans, 2013, Acta Cryst. D, 69, 1204, 10.1107/S0907444913000061 · DOI · Paper page
- French, 1978, Acta Cryst. A, 34, 517, 10.1107/S0567739478001114 · DOI
- Grosse-Kunstleve, 2004, Acta Cryst. A, 60, 1, 10.1107/S010876730302186X · DOI
- Grosse-Kunstleve, 2002, J. Appl. Cryst., 35, 126, 10.1107/S0021889801017824 · DOI · Paper page
- Holton, 2004, Proc. Natl Acad. Sci. USA, 101, 1537, 10.1073/pnas.0306241101 · DOI
- Howell, 1992, J. Appl. Cryst., 25, 81, 10.1107/S0021889891010385 · DOI
- Kantardjieff, 2003, Protein Sci., 12, 1865, 10.1110/ps.0350503 · DOI · Paper page
- Le Page, 1982, J. Appl. Cryst., 15, 255, 10.1107/S0021889882011959 · DOI
- Leslie, A. G. W. & Powell, H. R. (2007). Evolving Methods for Macromolecular Crystallography, edited by R. J. Read & J. L. Sussman, pp. 41-51. Dordrecht: Springer.
- Leslie, 2002, Acta Cryst. D, 58, 1924, 10.1107/S0907444902016864 · DOI
- Powell, 1999, Acta Cryst. D, 55, 1690, 10.1107/S0907444999009506 · DOI
- Sauter, 2004, J. Appl. Cryst., 37, 399, 10.1107/S0021889804005874 · DOI
- Steller, 1997, J. Appl. Cryst., 30, 1036, 10.1107/S0021889897008777 · DOI
- Vonrhein, 2011, Acta Cryst. D, 67, 293, 10.1107/S0907444911007773 · DOI
- Weiss, 1997, J. Appl. Cryst., 30, 203, 10.1107/S0021889897003907 · DOI
- Wilson, 1942, Nature (London), 150, 152, 10.1038/150152a0 · DOI · Paper page
- Winter, 2010, J. Appl. Cryst., 43, 186, 10.1107/S0021889809045701 · DOI · Paper page
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Crystal structures of a GABAA-receptor chimera reveal new endogenous neurosteroid-binding sites.
Laverty, D., Thomas, P., Field, M., Andersen, O. J., Gold, M. G., Biggin, P. C., Gielen, M., & Smart, T. G. (2017) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.3477 · Cited by 179
Crystal structures of a double-barrelled fluoride ion channel
Stockbridge, R. B., Kolmakova-Partensky, L., Shane, T., Koide, A., Koide, S., Miller, C., & Newstead, S. (2015) · Nature · doi:10.1038/nature14981 · Cited by 119
A supramolecular assembly mediates lentiviral DNA integration
Ballandras-Colas, A., Maskell, D. P., Serrao, E., Locke, J., Swuec, P., Jónsson, S. R., Kotecha, A., Cook, N. J., Pye, V. E., Taylor, I. A., et al. (2017) · Science · doi:10.1126/science.aah7002 · Cited by 107
The second messenger c-di-AMP inhibits the osmolyte uptake system OpuC in Staphylococcus aureus
Schuster, C. F., Bellows, L. E., Tosi, T., Campeotto, I., Corrigan, R. M., Freemont, P., & Gründling, A. (2016) · Science Signaling · doi:10.1126/scisignal.aaf7279 · Cited by 109
Metadata
- Authors
- Winter, G., Lobley, C. M. C., & Prince, S. M.
- Venue
- Acta Crystallographica Section D Biological Crystallography
- Published
- 2013-06-18
- Volume
- 69
- Issue
- 7
- Pages
- 1260-1273
- ISSN
- 0907-4449 (ISSN-L)
- OpenAlex
- W2164382089
- Cited by
- 559
- References
- 3
- FWCI
- 17.32
- Type
- journal article
- Language
- en
- Open access
- hybrid
- Licence
- creativecommons.org/licenses/by/2.0/uk/legalcode (vor)
- creativecommons.org/licenses/by/2.0/uk/legalcode (tdm)
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