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Global identifiability of nonlinear models of biological systems
Abstract
A prerequisite for well-posedness of parameter estimation of biological and physiological systems is a priori global identifiability, a property which concerns uniqueness of the solution for the unknown model parameters. Assessing a priori global identifiability is particularly difficult for nonlinear dynamic models. Various approaches have been proposed in the literature but no solution exists in the general case. In this paper, we present a new algorithm for testing global identifiability of nonlinear dynamic models, based on differential algebra. The characteristic set associated to the dynamic equations is calculated in an efficient way and computer algebra techniques are used to solve the resulting set of nonlinear algebraic equations. The algorithm is capable of handling many features arising in biological system models, including zero initial conditions and time-varying parameters. Examples of usage of the algorithm for analyzing a priori global identifiability of nonlinear models of biological and physiological systems are presented.
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Ritt, J. (1950) · Colloquium Publications · doi:10.1090/coll/033 · Cited by 460
Cited by
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Miao, H., Xia, X., Perelson, A. S., & Wu, H. (2011) · SIAM Review · doi:10.1137/090757009 · Cited by 610
Systems biology: parameter estimation for biochemical models
Ashyraliyev, M., Fomekong‐Nanfack, Y., Kaandorp, J. A., & Blom, J. G. (2009) · The FEBS Journal · doi:10.1111/j.1742-4658.2008.06844.x · Cited by 323
A hybrid approach for efficient and robust parameter estimation in biochemical pathways
Rodriguez-Fernandez, M., Mendes, P., & Banga, J. R. (2006) · Biosystems · doi:10.1016/j.biosystems.2005.06.016 · Cited by 304
Novel metaheuristic for parameter estimation in nonlinear dynamic biological systems
Rodriguez-Fernandez, M., Egea, J. A., & Banga, J. R. (2006) · BMC Bioinformatics · doi:10.1186/1471-2105-7-483 · Cited by 278
Data-based identifiability analysis of non-linear dynamical models
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Metadata
- Authors
- Audoly, S., Bellu, G., D'Angio, L., Saccomani, M. P., & Cobelli, C.
- Venue
- IEEE Transactions on Biomedical Engineering
- Published
- 2001
- Volume
- 48
- Issue
- 1
- Pages
- 55-65
- ISSN
- 0018-9294 (ISSN-L)
- OpenAlex
- W2126571583
- Cited by
- 325
- References
- 1
- FWCI
- 14.35
- Type
- journal article
- Language
- en
- Open access
- closed
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- Audoly, S., Bellu, G., D'Angio, L., Saccomani, M. P., & Cobelli, C. (2001). Global identifiability of nonlinear models of biological systems. IEEE Transactions on Biomedical Engineering. https://doi.org/10.1109/10.900248
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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