The DOI matches its Crossref record; 31 of the 31 references it cites were found in a registry or an index.
Combination Strategies in Multi-Atlas Image Segmentation: Application to Brain MR Data
Abstract
It has been shown that employing multiple atlas images improves segmentation accuracy in atlas-based medical image segmentation. Each atlas image is registered to the target image independently and the calculated transformation is applied to the segmentation of the atlas image to obtain a segmented version of the target image. Several independent candidate segmentations result from the process, which must be somehow combined into a single final segmentation. Majority voting is the generally used rule to fuse the segmentations, but more sophisticated methods have also been proposed. In this paper, we show that the use of global weights to ponderate candidate segmentations has a major limitation. As a means to improve segmentation accuracy, we propose the generalized local weighting voting method. Namely, the fusion weights adapt voxel-by-voxel according to a local estimation of segmentation performance. Using digital phantoms and MR images of the human brain, we demonstrate that the performance of each combination technique depends on the gray level contrast characteristics of the segmented region, and that no fusion method yields better results than the others for all the regions. In particular, we show that local combination strategies outperform global methods in segmenting high-contrast structures, while global techniques are less sensitive to noise when contrast between neighboring structures is low. We conclude that, in order to achieve the highest overall segmentation accuracy, the best combination method for each particular structure must be selected.
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Cites
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Cited by
The multimodal brain tumor image segmentation benchmark (BRATS)
Menze, B. H., Jakab, A., Bauer, S., Kalpathy-Cramer, J., Farahani, K., Kirby, J., Burren, Y., Porz, N., Slotboom, J., Wiest, R., et al. (2015) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2014.2377694 · Cited by 6,781
Elastix: a toolbox for intensity-based medical image registration
Klein, S., Staring, M., Murphy, K., Viergever, M. A., & Pluim, J. (2010) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2009.2035616 · Cited by 4,311
Multi-Atlas Segmentation with Joint Label Fusion
Wang, H., Suh, J. W., Das, S. R., Pluta, J. B., Craige, C., & Yushkevich, P. A. (2013) · IEEE Transactions on Pattern Analysis and Machine Intelligence · doi:10.1109/tpami.2012.143 · Cited by 796
Multi-atlas segmentation of biomedical images: A survey
Iglesias, J. E., & Sabuncu, M. R. (2015) · Medical Image Analysis · doi:10.1016/j.media.2015.06.012 · Cited by 667
Yushkevich, P. A., Pluta, J. B., Wang, H., Xie, L., Ding, S.-L., Gertje, E. C., Mancuso, L., Kliot, D., Das, S. R., & Wolk, D. A. (2015) · Human Brain Mapping · doi:10.1002/hbm.22627 · Cited by 599
Metadata
- Authors
- Artaechevarria, X., Munoz-Barrutia, A., & Ortiz-de-Solorzano, C.
- Venue
- IEEE Transactions on Medical Imaging
- Published
- 2009-08
- Volume
- 28
- Issue
- 8
- Pages
- 1266-1277
- ISSN
- 0278-0062 (ISSN-L)
- 1558-254X
- OpenAlex
- W2128806031
- Cited by
- 507
- References
- 31
- FWCI
- 32.25
- Type
- journal article
- Language
- en
- Open access
- closed
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- Artaechevarria, X., Munoz-Barrutia, A., & Ortiz-de-Solorzano, C. (2009). Combination Strategies in Multi-Atlas Image Segmentation: Application to Brain MR Data. IEEE Transactions on Medical Imaging. https://doi.org/10.1109/tmi.2009.2014372
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